ProsmORF-pred
Result : A1WF53
Protein Information
Information Type Description
Protein name ATP synthase subunit c (ATP synthase F(0) sector subunit c) (F-type ATPase subunit c) (F-ATPase subunit c) (Lipid-binding protein)
NCBI Accession ID CP000542.1
Organism Verminephrobacter eiseniae (strain EF01-2)
Left 540567
Right 540836
Strand +
Nucleotide Sequence ATGGAAATCATTCTCGGTTTTGTCGCTCTGGCCTGTGGTCTGATCGTTGGTCTGGGCGCCATCGGCGCTTCCATCGGCATCGGGCTGATGGGGGGCAAGTTCCTCGAATCGTCGGCACGCCAACCCGAACTGATCAACGAACTGCAAACCAAGATGTTCATCCTGGCGGGTCTGATCGACGCCGCGTTCCTGATCGGTGTGGCCATTGCCTTGATGTTCGCGTTCGCCAACCCCTTCGTTTCCACGCTCTTGGCCAACATGCCCAAGTAA
Sequence MEIILGFVALACGLIVGLGAIGASIGIGLMGGKFLESSARQPELINELQTKMFILAGLIDAAFLIGVAIALMFAFANPFVSTLLANMPK
Source of smORF Swiss-Prot
Function F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. {ECO:0000255|HAMAP-Rule:MF_01396}.; Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits. {ECO:0000255|HAMAP-Rule:MF_01396}.
Pubmed ID
Domain CDD:412393
Functional Category Others
Uniprot ID A1WF53
ORF Length (Amino Acid) 89
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 452
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 540567 540836 + NC_008786.1 Verminephrobacter eiseniae EF01-2
2 297613 297882 + NZ_CP021359.1 Acidovorax carolinensis
3 2479851 2480099 - NZ_CP060783.1 Diaphorobacter aerolatus
4 357789 358037 + NC_015677.1 Ramlibacter tataouinensis TTB310
5 2958015 2958257 - NC_015677.1 Ramlibacter tataouinensis TTB310
6 1024224 1024472 - NZ_CP020121.1 Comamonas kerstersii
7 2935520 2935768 - NZ_CP016278.1 Diaphorobacter polyhydroxybutyrativorans
8 2960183 2960431 - NZ_CP060790.1 Acidovorax monticola
9 406493 406741 + NZ_CP051298.1 Alicycliphilus denitrificans
10 192826 193074 + NZ_CP060714.1 Diaphorobacter ruginosibacter
11 5221408 5221656 + NZ_CP065748.1 Delftia lacustris
12 5197301 5197549 + NZ_CP017420.1 Delftia tsuruhatensis
13 3155864 3156112 + NZ_CP047650.1 Xylophilus rhododendri
14 297907 298155 + NZ_CP027792.1 Pulveribacter suum
15 393669 393917 + NC_008752.1 Acidovorax citrulli AAC00-1
16 472369 472617 + NC_015138.1 Acidovorax avenae subsp. avenae ATCC 19860
17 179400 179648 - NZ_CP043575.1 Comamonas koreensis
18 476102 476350 + NZ_CP013729.1 Roseateles depolymerans
19 565996 566241 + NZ_CP021455.1 Comamonas serinivorans
20 3467555 3467800 - NZ_CP064338.1 Schlegelella thermodepolymerans
21 687486 687734 + NZ_CP017476.1 Hydrogenophaga crassostreae
22 1263826 1264074 - NZ_CP027669.1 Simplicispira suum
23 3859939 3860187 - NZ_CP054840.1 Acidovorax antarcticus
24 361854 362102 + NZ_CP019239.1 Rhodoferax saidenbachensis
25 539495 539743 + NZ_CP040709.1 Inhella inkyongensis
26 502111 502359 - NZ_CP027666.1 Ottowia oryzae
27 253702 253950 + NC_008781.1 Polaromonas naphthalenivorans CJ2
28 424759 425010 + NZ_CP037867.1 Hydrogenophaga pseudoflava
29 558546 558791 + NZ_CP019236.1 Rhodoferax koreense
30 113294 113539 - NC_007908.1 Rhodoferax ferrireducens T118
31 207998 208246 + NC_008825.1 Methylibium petroleiphilum PM1
32 3507007 3507255 - NZ_CP022579.1 Oryzomicrobium terrae
33 1792875 1793123 + NC_006513.1 Aromatoleum aromaticum EbN1
34 21929 22174 + NZ_AP014569.1 Serpentinomonas mccroryi
35 1282898 1283146 - NZ_CP014671.1 Immundisolibacter cernigliae
36 534738 534986 + NZ_AP022345.1 Fluviibacter phosphoraccumulans
37 3130645 3130890 - NZ_CP025682.1 Azoarcus pumilus
38 2925237 2925485 - NZ_CP010554.1 Rugosibacter aromaticivorans
39 4171321 4171569 - NZ_CP035503.1 Rhodoferax sediminis
40 3998701 3998949 + NZ_LR778301.1 Denitratisoma oestradiolicum
41 191251 191502 + NZ_CP051461.1 Polaromonas vacuolata
42 3545314 3545571 - NZ_CP029210.1 Aquabacterium olei
43 2511247 2511492 + NZ_LT671418.1 Herminiimonas arsenitoxidans
44 2800067 2800312 - NZ_CP029331.1 Thauera hydrothermalis
45 132698 132943 + NZ_CP028339.1 Thauera aromatica K172
46 129644 129889 + NZ_CP018839.1 Thauera chlorobenzoica
47 2996028 2996273 - NZ_CP014646.1 Thauera humireducens
48 189039 189284 + NZ_CP016210.1 Azoarcus olearius
49 14042 14290 + NZ_AP014568.1 Serpentinomonas raichei
50 1347312 1347560 - NZ_CP020046.1 Thiomonas intermedia
51 1941572 1941820 + NZ_CP059467.1 Aromatoleum bremense
52 2612276 2612521 - NZ_CP059560.1 Aromatoleum petrolei
53 450102 450347 + NZ_CP024608.1 Massilia violaceinigra
54 5483395 5483637 - NZ_CP016171.1 Bordetella bronchialis
55 5507919 5508140 - NZ_CP013236.1 Collimonas pratensis
56 4642342 4642563 - NZ_CP013235.1 Collimonas arenae
57 5532252 5532473 - NZ_CP013232.1 Collimonas fungivorans
58 2362617 2362859 - NZ_CP022987.1 Pusillimonas thiosulfatoxidans
59 321355 321597 + NZ_CP043146.1 Bordetella holmesii
60 3498599 3498841 - NC_010645.1 Bordetella avium 197N
61 366184 366426 + NC_018518.1 Bordetella pertussis 18323
62 305492 305734 + NZ_CP016440.1 Bordetella pseudohinzii
63 3785490 3785732 - NZ_AP019378.1 Bordetella parapertussis
64 1931764 1932006 + NZ_CP021395.1 Bordetella hinzii
65 400541 400783 + NZ_LR134326.1 Bordetella bronchiseptica
66 370228 370470 + NC_010170.1 Bordetella petrii
67 5358149 5358391 - NZ_CP016172.1 Bordetella flabilis
68 2988282 2988524 + NZ_LR134302.1 Achromobacter spanius
69 388969 389211 + NZ_CP038034.1 Achromobacter insolitus
70 5403660 5403902 + NZ_CP053986.1 Achromobacter denitrificans
71 4199651 4199872 + NZ_CP018845.1 Herbaspirillum robiniae
72 4994510 4994755 - NZ_CP011930.1 Herbaspirillum seropedicae
73 5035007 5035252 - NZ_CP013737.1 Herbaspirillum rubrisubalbicans M1
74 5043539 5043784 - NZ_CP037993.1 Herbaspirillum huttiense
75 3757978 3758220 - NZ_HG916765.1 Castellaniella defragrans 65Phen
76 4050899 4051141 + NZ_CP019038.1 Massilia putida
77 4521426 4521665 - NZ_LT907988.1 Orrella dioscoreae
78 3596735 3596974 + NZ_CP028901.1 Algicoccus marinus
79 2849339 2849581 + NZ_CP013119.1 Alcaligenes faecalis
80 6114153 6114407 - NZ_CP043046.1 Pigmentiphaga aceris
81 91694 91939 + NZ_AP018558.1 Hydrogenophilus thermoluteolus
82 485225 485461 + NZ_CP031124.1 Ephemeroptericola cinctiostellae
83 746696 746938 - NZ_LR134378.1 Lautropia mirabilis
84 830829 831071 + NC_017964.1 Advenella kashmirensis WT001
85 838914 839156 + NZ_CP003915.1 Advenella mimigardefordensis DPN7
86 239895 240137 + NZ_AP018786.1 Sutterella megalosphaeroides
87 1467056 1467283 - NZ_CP031252.1 Neisseria elongata
88 1940181 1940423 + NZ_CP047165.1 Pelistega ratti
89 154130 154372 + NC_016043.1 Taylorella asinigenitalis MCE3
90 140033 140275 + NZ_CP021060.1 Taylorella equigenitalis
91 3950393 3950641 - NC_010524.1 Leptothrix cholodnii SP-6
92 1170027 1170290 + NZ_CP022423.1 Vitreoscilla filiformis
93 3791871 3792128 - NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H
94 1427873 1428106 + NZ_CP019448.1 Simonsiella muelleri ATCC 29453
95 1934706 1934948 + NZ_CP040882.1 Sutterella faecalis
96 1218835 1219065 + NZ_CP012028.1 Neisseria gonorrhoeae
97 1805373 1805603 + NZ_LS483369.1 Neisseria cinerea
98 1231732 1231968 + NZ_CP031325.1 Neisseria polysaccharea
99 2122249 2122479 + NZ_CP021520.1 Neisseria meningitidis
100 50523 50759 + NZ_CP031253.1 Neisseria lactamica
101 225387 225614 - NZ_CP031700.1 Neisseria zalophi
102 135572 135802 + NZ_CP072524.1 Neisseria sicca
103 2087916 2088152 - NZ_CP059569.1 Kingella oralis
104 868119 868352 - NZ_CP031699.1 Neisseria animalis
105 2608249 2608491 - NZ_CP068055.1 Sutterella wadsworthensis
106 1630003 1630239 - NZ_CP039887.1 Neisseria subflava
107 1085883 1086116 - NZ_LR134533.1 Neisseria weaveri
108 1635811 1636047 - NZ_CP039886.1 Neisseria flavescens
109 1364804 1365037 + NZ_CP059564.1 Alysiella filiformis
110 356770 357003 + NZ_CP059571.1 Neisseria bacilliformis
111 813538 813771 + NZ_CP059565.1 Neisseria wadsworthii
112 230332 230565 - NZ_LT906434.1 Neisseria zoodegmatis
113 526611 526844 - NZ_LR134313.1 Neisseria canis
114 877001 877234 - NZ_CP046027.1 Neisseria brasiliensis
115 2155132 2155365 - NZ_CP060414.1 Neisseria musculi
116 1980303 1980536 - NZ_LR134516.1 Neisseria animaloris
117 262691 262927 + NZ_CP059567.1 Neisseria shayeganii
118 3397824 3398066 - NZ_CP011971.1 Steroidobacter denitrificans
119 701935 702171 - NZ_CP022278.1 Neisseria chenwenguii
120 485064 485327 + NZ_CP019240.1 Rhodoferax antarcticus
121 1261492 1261719 + NZ_CP059563.1 Conchiformibius steedae
122 869372 869593 + NZ_CP009238.1 Basilea psittacipulmonis DSM 24701
123 430641 430889 + NZ_CP035708.1 Sphaerotilus natans subsp. sulfidivorans
124 2050244 2050462 - NZ_CP034464.1 Undibacterium parvum
125 4053598 4053855 - NZ_CP031416.1 Gallaecimonas mangrovi
126 4035017 4035310 - NC_020541.1 Rhodanobacter denitrificans
127 6366655 6366912 - NZ_CP021425.1 Oleiphilus messinensis
128 2911943 2912236 - NZ_CP014841.1 Dyella thiooxydans
129 3666516 3666743 - NC_007963.1 Chromohalobacter salexigens DSM 3043
130 3644819 3645076 + NZ_CP009533.1 Pseudomonas rhizosphaerae
131 4883446 4883703 - NZ_CP062158.2 Pseudomonas lundensis
132 4517084 4517341 - NZ_CP012676.1 Pseudomonas versuta
133 687736 687993 - NZ_CP049044.1 Pseudomonas psychrophila
134 189600 189857 - NZ_CP054205.1 Pseudomonas rhodesiae
135 5904702 5904959 - NZ_CP027723.1 Pseudomonas orientalis
136 5977339 5977596 - NZ_CP007039.1 Pseudomonas cichorii JBC1
137 6007431 6007688 - NZ_CP068034.2 Pseudomonas syringae
138 6085320 6085577 - NZ_CP023272.1 Pseudomonas lurida
139 5997738 5997995 - NZ_CP067022.1 Pseudomonas cannabina pv. alisalensis
140 6042766 6043023 - NZ_CP042804.1 Pseudomonas amygdali pv. tabaci str. ATCC 11528
141 6128743 6129000 - NZ_CP010896.1 Pseudomonas simiae
142 6358283 6358540 - NZ_CP056030.1 Pseudomonas eucalypticola
143 6386310 6386567 - NC_004578.1 Pseudomonas syringae pv. tomato str. DC3000
144 6547194 6547451 - NZ_CP027756.1 Pseudomonas synxantha
145 3908500 3908757 + NZ_CP005960.1 Pseudomonas mandelii JR-1
146 6749788 6750045 - NZ_CP014870.1 Pseudomonas silesiensis
147 6816481 6816738 - NZ_CP061079.1 Pseudomonas chlororaphis
148 6841680 6841937 - NZ_CP018420.1 Pseudomonas veronii
149 6616047 6616304 + NZ_CP012400.2 Pseudomonas yamanorum
150 6854732 6854989 - NZ_LS999205.1 Pseudomonas protegens CHA0
151 4336202 4336492 - NZ_CP064030.1 Dyella caseinilytica
152 6253235 6253492 - NC_002516.2 Pseudomonas aeruginosa PAO1
153 615693 615950 + NZ_CP048833.1 Pseudomonas multiresinivorans
154 237153 237425 + NC_017033.1 Frateuria aurantia DSM 6220
155 4307013 4307270 - NZ_CP061941.1 Marinomonas algicola
156 4672762 4673019 - NC_015276.1 Marinomonas mediterranea MMB-1
157 6078380 6078637 - NZ_AP022642.1 Pseudomonas otitidis
158 6084388 6084645 - NZ_CP047698.1 Pseudomonas knackmussii
159 5930306 5930533 + NZ_CP027860.1 Ahniella affigens
160 4757281 4757538 - NZ_LR215729.2 Pseudomonas marincola
161 3661894 3662151 + NZ_CP031146.1 Pseudomonas plecoglossicida
162 157645 157902 - NZ_CP046621.1 Pseudomonas alkylphenolica
163 139730 139987 - NZ_CP071706.1 Pseudomonas donghuensis
164 5731150 5731407 - NZ_CP024159.1 Pseudomonas mosselii
165 5878174 5878431 - NC_008027.1 Pseudomonas entomophila L48
166 134565 134822 + NZ_CP070503.1 Pseudomonas atacamensis
167 5937445 5937702 - NZ_CP022562.1 Pseudomonas monteilii
168 3541713 3541970 - NZ_CP014262.1 Pseudomonas corrugata
169 6145848 6146105 - NC_021505.1 Pseudomonas putida NBRC 14164
170 4977818 4978075 - NZ_CP009365.1 Pseudomonas soli
171 6313137 6313394 - NZ_CP029608.1 Pseudomonas kribbensis
172 4711686 4711943 + NZ_CP014205.2 Pseudomonas glycinae
173 6548341 6548598 - NZ_CP062253.1 Pseudomonas gozinkensis
174 6553909 6554166 - NZ_CP062252.1 Pseudomonas allokribbensis
175 6672275 6672532 - NZ_CP035088.1 Pseudomonas viciae
176 120666 120923 - NZ_CP051487.1 Pseudomonas umsongensis
177 4233552 4233809 + NZ_CP048810.1 Pseudomonas bijieensis
178 6727420 6727677 - NZ_CP034725.1 Pseudomonas brassicacearum
179 332474 332704 + NZ_CP041046.1 Luteibacter pinisoli
180 6045874 6046131 - NZ_CP043311.1 Pseudomonas lalkuanensis
181 5502 5747 + NC_002977.6 Methylococcus capsulatus str. Bath
182 6938930 6939187 - NZ_CP014158.1 Pseudomonas citronellolis
183 11167 11424 + NZ_CP013124.1 Pseudomonas mendocina S5.2
184 6172562 6172819 - NZ_AP014862.1 Pseudomonas furukawaii
185 5373013 5373270 - NZ_CP068551.1 Pseudomonas khazarica
186 3886188 3886445 - NC_015559.1 Marinomonas posidonica IVIA-Po-181
187 4049322 4049579 - NZ_CP054301.1 Marinomonas primoryensis
188 3015084 3015338 - NC_016147.2 Pseudoxanthomonas spadix BD-a59
189 7202221 7202475 - NC_007645.1 Hahella chejuensis KCTC 2396
190 2825416 2825673 - NC_006512.1 Idiomarina loihiensis L2TR
191 4020750 4020998 - NZ_CP021435.1 Halomonas beimenensis
192 3582680 3582907 - NZ_CP043420.1 Kushneria phosphatilytica
193 123773 124027 - NZ_CP045871.1 Litoricola lipolytica
194 2383888 2384109 + NZ_CP014476.1 Methylomonas denitrificans
195 1278746 1279006 - NZ_CP017480.1 Luteibacter rhizovicinus DSM 16549
196 4521614 4521868 - NZ_CP043042.1 Marinobacter fonticola
197 4948602 4948823 - NC_015572.1 Methylomonas methanica MC09
198 1518020 1518247 + NZ_CP023559.1 Salinicola tamaricis
199 1301817 1302053 - NZ_CP042218.1 Luteimonas granuli
200 3316553 3316810 + NZ_CP017715.1 Marinobacter salinus
201 3883965 3884222 - NC_017506.1 Marinobacter adhaerens HP15
202 240584 240841 + NZ_CP020931.1 Marinobacter salarius
203 1173871 1174128 - NZ_CP060820.1 Lysobacter solisilvae (ex Woo and Kim 2020)
204 3125143 3125397 - NZ_CP045350.1 Vibrio aquimaris
205 328091 328348 - NZ_CP070624.1 Photobacterium damselae subsp. damselae
206 3294031 3294270 - NZ_LN614830.1 Tatlockia micdadei
207 3501493 3501750 - NZ_CP071325.1 Photobacterium ganghwense
208 319604 319861 - NZ_CP005974.1 Photobacterium gaetbulicola Gung47
209 2847257 2847526 - NZ_AP014879.1 Sulfuricaulis limicola
210 3319128 3319385 - NC_011312.1 Aliivibrio salmonicida LFI1238
211 3957455 3957718 - NZ_AP017928.1 Methylocaldum marinum
212 3719830 3720048 - NZ_LT906442.1 Legionella waltersii
213 3131048 3131305 - NZ_CP032093.1 Vibrio alfacsensis
214 3730860 3731120 - NZ_CP046603.1 Lysobacter soli
215 2826215 2826466 - NZ_CP040021.1 Salinivibrio kushneri
216 2887695 2887949 - NZ_CP033078.1 Vibrio zhugei
217 13484 13738 + NZ_AP019651.1 Vibrio taketomensis
218 2738196 2738450 + NZ_CP014035.2 Vibrio fluvialis
219 3003620 3003877 + NZ_CP016414.1 Vibrio scophthalmi
220 1276808 1277062 + NZ_CP014056.2 Grimontia hollisae
221 2860450 2860704 - NZ_AP019657.1 Vibrio ponticus
222 2926480 2926734 + NZ_CP009977.1 Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
223 433595 433849 + NC_013456.1 Vibrio antiquarius
224 3247919 3248173 - NZ_CP030788.1 Vibrio campbellii
225 484873 485127 - NZ_CP040990.1 Vibrio furnissii
226 3277408 3277662 - NZ_CP031781.1 Vibrio parahaemolyticus
227 3122293 3122547 + NZ_CP018312.1 Vibrio rotiferianus
228 3428647 3428901 - NZ_AP014635.1 Vibrio tritonius
229 1833262 1833519 - NZ_CP019959.1 Vibrio owensii
230 203287 203541 - NZ_CP009467.1 Vibrio harveyi
231 2252569 2252826 + NZ_CP025792.1 Vibrio jasicida 090810c
232 864991 865218 - NZ_CP042382.1 Pistricoccus aurantiacus
233 1719319 1719567 - NZ_CP018139.1 Halomonas aestuarii
234 53786 54025 + NZ_CP016397.1 Legionella clemsonensis
235 3400880 3401119 - NZ_LN681225.1 Legionella hackeliae
236 695515 695772 + NC_005085.1 Chromobacterium violaceum ATCC 12472
237 4037305 4037532 - NC_014532.2 Halomonas elongata DSM 2581
238 4730671 4730898 - NZ_CP013106.1 Halomonas huangheensis
239 357690 357908 + NC_016112.1 Methylotuvimicrobium alcaliphilum 20Z
240 476525 476743 + NZ_CP035467.1 Methylotuvimicrobium buryatense
241 1660325 1660546 + NZ_CP043929.1 Methylomonas rhizoryzae
242 2230734 2230973 - NZ_LR134374.1 Legionella spiritensis
243 3391613 3391831 - NZ_CP013742.1 Legionella pneumophila
244 2911142 2911381 - NZ_LT906451.1 Legionella lansingensis
245 135544 135783 - NZ_CP038254.1 Legionella israelensis
246 2415241 2415498 - NZ_CP036200.1 Shewanella maritima
247 3171985 3172248 - NZ_CP041783.1 Shewanella donghaensis
248 3495040 3495285 + NZ_CP071517.1 Lysobacter arenosi
249 3259024 3259281 - NZ_CP043473.1 Chromobacterium paludis
250 1267455 1267712 - NZ_CP029495.1 Chromobacterium phragmitis
251 2586942 2587199 - NZ_CP017707.1 Chromobacterium vaccinii
252 4156885 4157103 - NZ_LN614827.1 Legionella fallonii LLAP-10
253 4515254 4515511 - NZ_CP061081.1 Marinomonas arctica
254 81595 81813 - NZ_LR134417.1 Legionella adelaidensis
255 2860425 2860679 - NZ_CP022741.1 Vibrio qinghaiensis
256 1458393 1458650 + NZ_CP065150.1 Vibrio kanaloae
257 3280863 3281120 - NZ_CP009354.1 Vibrio tubiashii ATCC 19109
258 3293274 3293531 - NC_011753.2 Vibrio atlanticus
259 3322894 3323151 - NZ_CP039700.1 Vibrio cyclitrophicus
260 3434408 3434665 + NZ_LT960611.1 Vibrio tapetis subsp. tapetis
261 5336037 5336300 - NZ_AP014940.1 Lysobacter enzymogenes
262 2610325 2610582 + NZ_CP035688.1 Vibrio metoecus
263 13145 13402 + NZ_AP014524.1 Vibrio cholerae MS6
264 608538 608783 - NZ_CP022355.1 Paraphotobacterium marinum
265 32099 32368 + NZ_CP016268.1 Woeseia oceani
266 1976304 1976561 - NZ_CP070273.1 Marinomonas foliarum
267 180004 180249 + NC_005966.1 Acinetobacter baylyi ADP1
268 4357229 4357495 - NZ_CP041352.1 Casimicrobium huifangae
269 678993 679238 + NZ_CP071766.1 Acinetobacter towneri
270 2614956 2615201 - NZ_CP045650.1 Acinetobacter wanghuae
271 700155 700400 - NZ_CP012808.1 Acinetobacter equi
272 157184 157429 + NZ_CP044483.1 Acinetobacter schindleri
273 3126825 3127070 - NZ_CP024632.1 Acinetobacter junii
274 248934 249179 + NZ_CP029397.2 Acinetobacter defluvii
275 219839 220084 + NZ_CP035934.2 Acinetobacter cumulans
276 3286937 3287182 - NZ_CP030880.1 Acinetobacter haemolyticus
277 1858846 1859091 - NZ_CP040105.1 Acinetobacter nosocomialis M2
278 3301035 3301280 + NC_016603.1 Acinetobacter pittii PHEA-2
279 1743713 1743958 - NZ_CP070518.1 Acinetobacter calcoaceticus
280 3780767 3781012 - NZ_CP053391.1 Acinetobacter lactucae
281 3757838 3758083 - NZ_CP015121.1 Acinetobacter baumannii
282 2906362 2906607 - NZ_CP041970.1 Acinetobacter dispersus
283 3878911 3879156 - NZ_CP065820.1 Acinetobacter seifertii
284 3960863 3961108 - NC_014259.1 Acinetobacter oleivorans DR1
285 4453852 4454097 - NZ_AP014630.1 Acinetobacter guillouiae
286 4975095 4975346 - NZ_CP046378.1 Shewanella algae
287 137071 137328 - NZ_CP044069.1 Vibrio vulnificus
288 3454442 3454666 - NC_011901.1 Thioalkalivibrio sulfidiphilus HL-EbGr7
289 4552223 4552480 - NC_008709.1 Psychromonas ingrahamii 37
290 4953467 4953712 - NZ_CP020472.1 Shewanella japonica
291 4219431 4219682 - NZ_CP069213.1 Shewanella litorisediminis
292 4299653 4299904 - NC_008700.1 Shewanella amazonensis SB2B
293 4111900 4112151 - NZ_CP020373.1 Shewanella khirikhana
294 5158847 5159104 - NC_009901.1 Shewanella pealeana ATCC 700345
295 5211128 5211385 - NC_010334.1 Shewanella halifaxensis HAW-EB4
296 6891362 6891601 - NZ_CP036401.1 Massilia albidiflava
297 810394 810645 - NZ_CP039731.1 Aquitalea aquatilis
298 157448 157699 + NZ_CP047241.1 Aquitalea denitrificans
299 4040893 4041111 - NC_013861.1 Legionella longbeachae NSW150
300 3717422 3717640 - NZ_CP025491.2 Legionella sainthelensi
301 3943265 3943483 - NZ_AP014936.1 Sulfurifustis variabilis
302 3375392 3375646 - NZ_CP049801.1 Acinetobacter shaoyimingii
303 329810 330031 + NZ_CP041335.1 Chitinolyticbacter meiyuanensis
304 3047890 3048141 - NC_014207.1 Methylotenera versatilis 301
305 4777233 4777484 - NZ_CP022358.1 Shewanella bicestrii
306 3805065 3805301 + NZ_CP046904.1 Massilia flava
307 42853 43107 - NZ_CP016604.1 Otariodibacter oris
308 5035730 5035966 + NZ_CP040017.1 Massilia umbonata
309 4208560 4208811 - NZ_CP037951.1 Parashewanella tropica
310 5276592 5276843 - NC_016901.1 Shewanella baltica OS678
311 5426849 5427100 - NZ_CP037952.1 Parashewanella spongiae
312 4525261 4525512 - NC_007954.1 Shewanella denitrificans OS217
313 4955853 4956104 - NC_014012.1 Shewanella violacea DSS12
314 5495305 5495556 - NC_009831.1 Shewanella sediminis HAW-EB3
315 5897739 5897990 - NC_010506.1 Shewanella woodyi ATCC 51908
316 6347131 6347382 - NZ_CP014782.1 Shewanella psychrophila
317 4581546 4581797 - NC_009092.1 Shewanella loihica PV-4
318 5390079 5390330 - NC_011566.1 Shewanella piezotolerans WP3
319 2535858 2536109 - NC_012968.1 Methylotenera mobilis JLW8
320 4303662 4303913 - NZ_CP022272.1 Shewanella marisflavi
321 4633415 4633666 - NZ_CP041036.1 Shewanella polaris
322 232123 232374 - NZ_CP034015.1 Shewanella livingstonensis
323 443212 443463 + NZ_CP028324.1 Massilia armeniaca
324 4830005 4830256 - NC_008345.1 Shewanella frigidimarina NCIMB 400
325 3152892 3153146 - NC_014394.1 Gallionella capsiferriformans ES-2
326 2960254 2960508 - NC_007947.1 Methylobacillus flagellatus KT
327 2700496 2700768 - NZ_CP041730.1 Chitinimonas arctica
328 7760610 7760867 - NZ_CP018632.1 Granulosicoccus antarcticus IMCC3135
329 589999 590253 + NZ_LT906463.1 Haemophilus pittmaniae
330 5522 5776 - NZ_CP016180.1 Pasteurella skyensis
331 2985622 2985873 - NC_012969.1 Methylovorus glucosetrophus SIP3-4
332 1947772 1948026 + NZ_LT906448.1 Pasteurella dagmatis
333 1254346 1254624 - NZ_CP060711.1 Thermomonas brevis
334 3265907 3266194 - NC_008340.1 Alkalilimnicola ehrlichii MLHE-1
335 335063 335308 + NZ_CP011381.2 Moraxella bovoculi
336 380313 380558 + NZ_CP011158.1 Moraxella ovis
337 305797 306015 + NZ_CP072844.1 Psychrosphaera aestuarii
338 780516 780770 - NZ_LR134510.1 Actinobacillus delphinicola
339 996083 996337 - NZ_CP028926.1 Pasteurella multocida
340 650115 650375 - NZ_CP064781.1 Azospira restricta
341 487936 488190 + NZ_CP015029.1 Frederiksenia canicola
342 392869 393114 + NC_014147.1 Moraxella catarrhalis BBH18
343 54913 55158 - NZ_LR134343.1 Moraxella cuniculi
344 351542 351787 + NZ_CP030241.1 Moraxella bovis
345 616103 616357 + NZ_CP029206.1 Actinobacillus porcitonsillarum
346 1601027 1601281 + NC_011852.1 Glaesserella parasuis SH0165
347 4552159 4552407 - NZ_CP053069.1 Usitatibacter rugosus
348 33413 33667 - NZ_CP016605.1 Bisgaardia hudsonensis
349 3269926 3270159 - NZ_CP031961.1 Pseudoalteromonas tunicata
350 504602 504847 + NZ_CP065728.1 Moraxella nonliquefaciens
351 681938 682177 - NZ_CP053627.1 Xylella taiwanensis
352 2049433 2049687 - NZ_CP007715.1 Actinobacillus equuli subsp. equuli
353 2070888 2071142 + NZ_CP009159.1 Actinobacillus suis ATCC 33415
354 1630604 1630840 - NZ_CP038018.1 Eikenella exigua
355 5227 5481 + NZ_CP006944.1 Mannheimia varigena USDA-ARS-USMARC-1312
356 425848 426102 - NZ_CP046531.1 Mannheimia ovis
357 467041 467295 - NZ_CP055305.1 Mannheimia pernigra
358 1924790 1925044 - NZ_CP030753.1 Actinobacillus pleuropneumoniae
359 34458 34712 + NC_021883.1 Mannheimia haemolytica USMARC_2286
360 536744 536998 + NZ_CP009610.1 Haemophilus influenzae
361 484453 484707 + NZ_LS483458.1 Haemophilus haemolyticus
362 610453 610707 + NZ_LS483429.1 Haemophilus aegyptius
363 354267 354521 - NZ_LR134167.1 Avibacterium volantium
364 1647743 1647997 - NZ_CP040863.1 Rodentibacter heylii
365 762190 762426 - NZ_LT906482.1 Eikenella corrodens
366 2075601 2075855 + NZ_CP012371.1 Nitrosospira briensis C-128
367 283058 283312 - NZ_CP021106.3 Nitrosospira lacus
368 328786 329034 + NC_007614.1 Nitrosospira multiformis ATCC 25196
369 533782 534021 - NC_004556.1 Xylella fastidiosa Temecula1
370 1316609 1316857 - NZ_CP012678.1 Psychrobacter urativorans
371 6326899 6327156 - NZ_CP048878.1 Spartinivicinus ruber
372 41019 41252 - NZ_CP032090.1 Pseudoalteromonas donghaensis
373 1861217 1861471 + NZ_CP015031.1 Basfia succiniciproducens
374 2277020 2277274 - NC_006300.1 [Mannheimia] succiniciproducens MBEL55E
375 2312143 2312391 + NZ_LR884459.1 Psychrobacter arenosus
376 169473 169718 + NZ_CP032134.1 Acinetobacter chinensis
377 2497775 2498023 - NC_007204.1 Psychrobacter arcticus 273-4
378 2862245 2862493 - NC_007969.1 Psychrobacter cryohalolentis K5
379 3130530 3130778 - NZ_CP014945.1 Psychrobacter alimentarius
380 3599383 3599616 - NZ_CP033065.1 Pseudoalteromonas agarivorans
381 3618723 3618956 - NZ_CP027523.1 Pseudoalteromonas carrageenovora
382 3657136 3657369 - NZ_CP023464.1 Pseudoalteromonas atlantica
383 3708125 3708358 - NZ_CP011028.1 Pseudoalteromonas espejiana DSM 9414
384 2327699 2327953 - NZ_CP006954.1 Bibersteinia trehalosi USDA-ARS-USMARC-188
385 250499 250717 + NZ_CP018787.1 Oxalobacter formigenes
386 277967 278212 + NZ_CP016895.1 Acinetobacter larvae
387 4109705 4109953 - NZ_CP036536.1 Salinimonas lutimaris
388 1308110 1308343 - NZ_CP043476.1 Xanthomonas hyacinthi
389 796562 796798 + NZ_LT853882.1 Xanthomonas fragariae
390 3135266 3135499 - NZ_CP011039.1 Pseudoalteromonas spongiae UST010723-006
391 707557 707790 - NZ_CP009888.1 Pseudoalteromonas piratica
392 4176792 4177028 - NZ_CP058243.1 Xanthomonas campestris pv. raphani
393 457579 457815 + NZ_CP041242.1 Lysobacter alkalisoli
394 4022594 4022830 - NZ_CP037883.1 Stenotrophomonas indicatrix
395 57721 57939 + NC_003910.7 Colwellia psychrerythraea 34H
396 433658 433912 - NZ_LS483443.1 Aggregatibacter segnis ATCC 33393
397 1354456 1354710 - NZ_LR134327.1 Aggregatibacter aphrophilus ATCC 33389
398 3832168 3832401 - NZ_CP013187.1 Pseudoalteromonas phenolica
399 397925 398161 - NZ_CP060731.1 Pseudoxanthomonas mexicana
400 3828406 3828648 - NZ_CP011025.1 Pseudoalteromonas arctica A 37-1-2
401 3064633 3064878 + NZ_LS483250.1 Moritella yayanosii
402 2075504 2075746 - NZ_CP072133.1 Pseudoalteromonas xiamenensis
403 3850020 3850241 - NZ_CP017689.1 Thalassotalea crassostreae
404 4407583 4407810 - NZ_CP065435.1 Halomonas sp. SS10-MC5
405 3399437 3399661 - NZ_CP046570.1 Xanthomonas albilineans
406 3953562 3953804 - NZ_CP044399.1 Moritella marina ATCC 15381
407 1278428 1278661 - NZ_CP072425.1 Pseudoalteromonas viridis
408 1917074 1917337 - NC_022664.1 Spiribacter curvatus
409 101926 102153 - NZ_CP023406.1 Luteimonas chenhongjianii
410 2837749 2838015 - NC_013166.1 Kangiella koreensis DSM 16069
411 3193194 3193427 - NZ_CP029347.1 Saliniradius amylolyticus
412 2482985 2483251 - NZ_CP012418.1 Kangiella sediminilitoris
413 177249 177470 + NZ_CP012154.1 Wenzhouxiangella marina
414 2638278 2638544 - NZ_CP025120.1 Kangiella profundi
415 3993596 3993832 - NZ_CP033326.1 Xanthomonas cucurbitae
416 4224715 4224951 - NZ_CP072268.1 Xanthomonas euvesicatoria pv. alfalfae
417 2116198 2116434 - NZ_CP018725.1 Xanthomonas vesicatoria ATCC 35937
418 4310424 4310660 - NZ_CP048044.1 Xanthomonas citri
419 2814704 2814940 - NZ_CP016878.1 Xanthomonas hortorum
420 4095232 4095459 - NZ_CP031093.1 Hydrocarboniclastica marina
421 1729856 1730119 - NC_021291.1 Spiribacter salinus M19-40
422 3619473 3619709 - NZ_CP007810.1 Xanthomonas oryzae pv. oryzicola
423 191299 191535 + NZ_CP011797.1 Reinekea forsetii
424 2480875 2481141 - NZ_CP010975.1 Kangiella geojedonensis
425 1937936 1938163 - NC_017856.1 Methylophaga frappieri
426 236596 236823 - NC_017857.3 Methylophaga nitratireducenticrescens
427 334661 334888 + NZ_CP060009.1 Pseudomonas sediminis
428 2213978 2214205 - NZ_CP070505.1 Pseudomonas toyotomiensis
429 3917753 3917974 - NZ_CP048602.1 Halomonas piezotolerans
430 11709 11957 + NZ_CP047491.1 Microbulbifer hydrolyticus
431 53244 53465 - NZ_CP051183.1 Bermanella marisrubri
432 3911703 3911948 - NZ_CP014864.1 Microbulbifer thermotolerans
433 4239393 4239641 - NZ_CP019650.1 Microbulbifer agarilyticus
434 1023777 1024025 - NZ_CP014143.1 Microbulbifer aggregans
435 3821625 3821861 - NZ_AP014545.1 Amphritea japonica ATCC BAA-1530
436 3442750 3442989 - NZ_AP021884.1 Sulfuriferula plumbiphila
437 4268178 4268408 - NC_014541.1 Ferrimonas balearica DSM 9799
438 2112308 2112592 + NZ_LR699114.1 Aquicella lusitana
439 4565001 4565237 - NZ_CP011835.1 Azotobacter chroococcum
440 2705421 2705657 + NZ_CP045302.1 Azotobacter salinestris
441 5334704 5334940 - NC_012560.1 Azotobacter vinelandii DJ
442 3352006 3352245 - NZ_AP021881.1 Sulfuriferula nivalis
443 953848 954075 + NZ_CP059082.1 Halomonas titanicae
444 3976896 3977117 - NZ_CP011494.1 Marinobacter psychrophilus
445 2993984 2994223 - NC_013959.1 Sideroxydans lithotrophicus ES-1
446 3120771 3121004 - NC_022357.1 Sulfuricella denitrificans skB26
447 3965128 3965355 - NZ_CP014226.1 Halomonas chromatireducens
448 3535730 3535966 - NZ_CP043869.1 Neptunomonas concharum
449 2675060 2675296 - NC_008789.1 Halorhodospira halophila SL1
450 4084063 4084287 - NZ_CP012621.1 Zobellella denitrificans
451 4349514 4349753 - NC_013216.1 Desulfofarcimen acetoxidans DSM 771
452 2764118 2764354 + NZ_CP022684.1 Ketobacter alkanivorans
453 3890077 3890316 - NC_020888.1 Thalassolituus oleivorans MIL-1
++ More..
Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NC_008786.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF03899.17 0.89 404 937.0 same-strand ATP synthase I chain
2 PF00119.22 1.0 452 77.0 same-strand ATP synthase A chain
3 PF00430.20 0.99 448 58.0 same-strand ATP synthase B/B' CF(0)
4 PF00213.20 0.98 444 541.0 same-strand ATP synthase delta (OSCP) subunit
5 PF00006.27 1.0 451 1318.5 same-strand ATP synthase alpha/beta family, nucleotide-binding domain
6 PF00306.29 1.0 450 1100.0 same-strand ATP synthase alpha/beta chain, C terminal domain
7 PF02874.25 1.0 452 1318 same-strand ATP synthase alpha/beta family, beta-barrel domain
8 PF00231.21 1.0 451 2693 same-strand ATP synthase
++ More..