Result : O06976
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | HPr-like protein Crh (Catabolite repression HPr) |
| NCBI Accession ID | Z94043.1 |
| Organism | Bacillus subtilis (strain 168) |
| Left | 12612 |
| Right | 12869 |
| Strand | + |
| Nucleotide Sequence | ATGGTTCAACAGAAAGTGGAAGTTCGATTAAAGACAGGACTGCAAGCACGTCCTGCTGCTTTGTTTGTACAAGAAGCAAACCGGTTTACGTCAGATGTGTTTCTTGAGAAGGATGGGAAAAAAGTAAACGCCAAAAGCATCATGGGGCTGATGAGCCTTGCGGTAAGCACAGGCACTGAGGTTACCTTGATTGCCCAGGGAGAAGATGAACAAGAGGCGCTGGAGAAGCTGGCTGCTTACGTTCAAGAAGAAGTTTAG |
| Sequence | MVQQKVEVRLKTGLQARPAALFVQEANRFTSDVFLEKDGKKVNAKSIMGLMSLAVSTGTEVTLIAQGEDEQEALEKLAAYVQEEV |
| Source of smORF | Swiss-Prot |
| Function | Along with seryl-phosphorylated HPr, phosphorylated Crh is implicated in carbon catabolite repression (CCR) of levanase, inositol dehydrogenase, and beta-xylosidase. Exerts its effect on CCR by interacting with CcpA. {ECO:0000269|Pubmed:16316990, ECO:0000269|Pubmed:9237995}. |
| Pubmed ID | 9384377 9237995 11916384 12972249 16316990 16411239 18284240 |
| Domain | CDD:412221 |
| Functional Category | Others |
| Uniprot ID | O06976 |
| ORF Length (Amino Acid) | 85 |
++ More..
| Conservation Analysis |
No. of Species: 212
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3420905 | 3421162 | - | NZ_CP033052.1 | Bacillus vallismortis |
| 2 | 3389804 | 3390061 | - | NZ_CP048852.1 | Bacillus tequilensis |
| 3 | 3371768 | 3372025 | - | NZ_CP034943.1 | Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 |
| 4 | 3433744 | 3434001 | - | NZ_CP013984.1 | Bacillus inaquosorum |
| 5 | 3569292 | 3569549 | - | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 6 | 3352135 | 3352392 | - | NZ_CP051464.1 | Bacillus mojavensis |
| 7 | 2683725 | 2683982 | + | NZ_CP029364.1 | Bacillus halotolerans |
| 8 | 607516 | 607773 | + | NZ_CP011937.1 | Bacillus velezensis |
| 9 | 3437314 | 3437571 | - | NZ_CP053376.1 | Bacillus amyloliquefaciens |
| 10 | 1785646 | 1785903 | + | NZ_CP017703.1 | Aeribacillus pallidus |
| 11 | 483684 | 483941 | + | NZ_CP016020.1 | Bacillus weihaiensis |
| 12 | 1671351 | 1671617 | + | NZ_CP016020.1 | Bacillus weihaiensis |
| 13 | 3971134 | 3971391 | - | NZ_LT603683.1 | Bacillus glycinifermentans |
| 14 | 881566 | 881823 | + | NZ_CP070511.1 | Parageobacillus toebii |
| 15 | 151608 | 151865 | - | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 16 | 2268600 | 2268857 | - | NZ_CP061470.1 | Geobacillus zalihae |
| 17 | 211329 | 211586 | + | NZ_CP014342.1 | Geobacillus subterraneus |
| 18 | 3084351 | 3084608 | - | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 19 | 1955432 | 1955689 | - | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 20 | 3548724 | 3548993 | - | NC_006270.3 | Bacillus licheniformis DSM 13 = ATCC 14580 |
| 21 | 764203 | 764460 | + | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 22 | 3742697 | 3742966 | - | NZ_CP023665.1 | Bacillus paralicheniformis |
| 23 | 3971952 | 3972209 | - | NC_022524.1 | Bacillus infantis NRRL B-14911 |
| 24 | 1562835 | 1563101 | + | NC_022524.1 | Bacillus infantis NRRL B-14911 |
| 25 | 2726745 | 2727002 | - | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 26 | 4386032 | 4386289 | - | NZ_CP042593.1 | Bacillus dafuensis |
| 27 | 2525841 | 2526098 | + | NZ_CP041305.1 | Cytobacillus ciccensis |
| 28 | 567616 | 567873 | + | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 29 | 3841958 | 3842215 | - | NZ_CP018866.1 | Sutcliffiella cohnii |
| 30 | 3668260 | 3668514 | - | NC_002570.2 | Alkalihalobacillus halodurans C-125 |
| 31 | 2072290 | 2072547 | - | NZ_CP030926.1 | Peribacillus butanolivorans |
| 32 | 2461690 | 2461947 | - | NZ_CP012152.1 | Anoxybacillus gonensis |
| 33 | 2175688 | 2175945 | + | NZ_CP043404.1 | Bacillus safensis |
| 34 | 3260884 | 3261141 | + | NZ_CP068053.1 | Peribacillus psychrosaccharolyticus |
| 35 | 1431947 | 1432213 | - | NZ_CP068053.1 | Peribacillus psychrosaccharolyticus |
| 36 | 2237592 | 2237849 | + | NZ_CP017786.1 | Bacillus xiamenensis |
| 37 | 3122588 | 3122845 | - | NZ_CP011150.1 | Bacillus altitudinis |
| 38 | 5069413 | 5069661 | - | NC_011725.1 | Bacillus cereus B4264 |
| 39 | 2726463 | 2726726 | + | NZ_CP022983.1 | Cytobacillus kochii |
| 40 | 318175 | 318441 | - | NZ_CP022983.1 | Cytobacillus kochii |
| 41 | 3359135 | 3359392 | - | NZ_CP015378.1 | Fictibacillus phosphorivorans |
| 42 | 1436579 | 1436833 | + | NZ_CP020772.1 | Halobacillus mangrovi |
| 43 | 507353 | 507610 | + | NZ_CP012024.1 | Bacillus smithii |
| 44 | 766532 | 766798 | + | NC_015519.1 | Tepidanaerobacter acetatoxydans Re1 |
| 45 | 1725666 | 1725923 | - | NZ_CP017705.1 | Brevibacillus laterosporus DSM 25 |
| 46 | 1088494 | 1088748 | + | NZ_CP065425.1 | Heyndrickxia vini |
| 47 | 3747200 | 3747457 | - | NZ_CP024109.1 | Bacillus cytotoxicus |
| 48 | 2927586 | 2927843 | + | NZ_CP017704.1 | Peribacillus simplex NBRC 15720 = DSM 1321 |
| 49 | 2557108 | 2557365 | - | NZ_CP009416.1 | Jeotgalibacillus malaysiensis |
| 50 | 640495 | 640752 | - | NZ_CP013661.2 | Planococcus kocurii |
| 51 | 1128215 | 1128472 | + | NZ_CP019401.1 | Planococcus faecalis |
| 52 | 4457030 | 4457299 | + | NZ_CP033433.1 | Cohnella candidum |
| 53 | 2575455 | 2575709 | - | NZ_CP017962.1 | Virgibacillus halodenitrificans |
| 54 | 3774076 | 3774333 | - | NC_014829.1 | Evansella cellulosilytica DSM 2522 |
| 55 | 613413 | 613682 | + | NZ_AP019400.1 | Cohnella abietis |
| 56 | 3720697 | 3720966 | - | NC_019897.1 | Thermobacillus composti KWC4 |
| 57 | 1196070 | 1196327 | + | NZ_CP016534.2 | Planococcus antarcticus DSM 14505 |
| 58 | 1123660 | 1123929 | + | NZ_CP034437.1 | Paenibacillus albus |
| 59 | 490950 | 491219 | + | NZ_CP048209.1 | Paenibacillus lycopersici |
| 60 | 3309033 | 3309302 | - | NZ_CP048286.1 | Paenibacillus rhizovicinus |
| 61 | 4796924 | 4797178 | - | NZ_CP024035.1 | Priestia aryabhattai |
| 62 | 3336614 | 3336874 | + | NZ_CP024035.1 | Priestia aryabhattai |
| 63 | 3996794 | 3997063 | - | NZ_CP014167.1 | Paenibacillus yonginensis |
| 64 | 940695 | 940952 | - | NZ_CP063356.1 | Anaerobacillus isosaccharinicus |
| 65 | 456368 | 456625 | + | NZ_CP039710.1 | Thermoactinomyces vulgaris |
| 66 | 744276 | 744536 | + | NZ_AP017312.1 | Aneurinibacillus soli |
| 67 | 2439231 | 2439488 | + | NZ_CP022315.1 | Virgibacillus phasianinus |
| 68 | 1145658 | 1145915 | + | NZ_CP016539.2 | Planococcus plakortidis |
| 69 | 860448 | 860705 | + | NZ_CP013659.2 | Planococcus rifietoensis |
| 70 | 108956 | 109210 | - | NZ_CP018622.1 | Virgibacillus dokdonensis |
| 71 | 4058944 | 4059213 | - | NZ_CP013652.1 | Paenibacillus naphthalenovorans |
| 72 | 3305253 | 3305513 | - | NZ_CP048103.1 | Kroppenstedtia eburnea |
| 73 | 3964355 | 3964624 | + | NZ_CP054614.1 | Paenibacillus barcinonensis |
| 74 | 929252 | 929509 | + | NZ_CP010820.1 | Lysinibacillus fusiformis |
| 75 | 3011756 | 3012025 | - | NZ_CP035492.1 | Paenibacillus protaetiae |
| 76 | 2430299 | 2430556 | - | NZ_CP034118.1 | Staphylospora marina |
| 77 | 5034688 | 5034957 | - | NZ_AP019308.1 | Paenibacillus baekrokdamisoli |
| 78 | 280647 | 280916 | + | NZ_CP019659.1 | Paenibacillus larvae subsp. larvae |
| 79 | 870396 | 870653 | + | NZ_CP014616.1 | Sporosarcina psychrophila |
| 80 | 1089875 | 1090132 | + | NZ_CP016537.2 | Planococcus halocryophilus |
| 81 | 1128338 | 1128595 | + | NZ_CP059540.1 | Planococcus maritimus |
| 82 | 171789 | 172058 | + | NZ_CP004078.1 | Paenibacillus sabinae T27 |
| 83 | 174916 | 175185 | + | NZ_CP009288.1 | Paenibacillus durus |
| 84 | 168342 | 168611 | + | NZ_CP009285.1 | Paenibacillus borealis |
| 85 | 831903 | 832172 | - | NZ_CP034248.1 | Paenibacillus lentus |
| 86 | 1057152 | 1057409 | + | NZ_CP016543.2 | Planococcus donghaensis |
| 87 | 181685 | 181954 | + | NZ_CP009428.1 | Paenibacillus odorifer |
| 88 | 769050 | 769319 | - | NZ_CP043611.1 | Paenibacillus antarcticus |
| 89 | 3318626 | 3318883 | - | NC_013791.2 | Alkalihalobacillus pseudofirmus OF4 |
| 90 | 2961174 | 2961428 | - | NC_017668.1 | Halobacillus halophilus DSM 2266 |
| 91 | 7235081 | 7235350 | + | NZ_CP021780.1 | Paenibacillus donghaensis |
| 92 | 3008610 | 3008879 | - | NZ_CP016809.1 | Paenibacillus ihbetae |
| 93 | 827715 | 827984 | + | NZ_CP013023.1 | Paenibacillus bovis |
| 94 | 2088147 | 2088416 | + | NZ_CP048429.1 | Paenibacillus jilunlii |
| 95 | 173398 | 173667 | + | NZ_CP009287.1 | Paenibacillus graminis |
| 96 | 2044738 | 2045007 | + | NZ_CP068595.1 | Paenibacillus sonchi |
| 97 | 179008 | 179277 | + | NZ_LN831776.1 | Paenibacillus riograndensis SBR5 |
| 98 | 1117121 | 1117378 | + | NZ_CP016538.2 | Planococcus maritimus |
| 99 | 3294662 | 3294880 | - | NZ_CP019699.1 | Novibacillus thermophilus |
| 100 | 2522013 | 2522273 | - | NC_004193.1 | Oceanobacillus iheyensis HTE831 |
| 101 | 1070173 | 1070430 | + | NZ_CP016540.2 | Planococcus versutus |
| 102 | 2663987 | 2664256 | + | NZ_CP011388.1 | Paenibacillus swuensis |
| 103 | 5176731 | 5177000 | - | NZ_CP045293.1 | Paenibacillus guangzhouensis |
| 104 | 401975 | 402244 | + | NZ_CP034235.1 | Paenibacillus psychroresistens |
| 105 | 760664 | 760933 | + | NZ_CP026520.1 | Paenibacillus chitinolyticus |
| 106 | 662698 | 662955 | + | NZ_CP012502.1 | Bacillus beveridgei |
| 107 | 3817569 | 3817826 | - | NZ_CP006837.1 | Lysinibacillus varians |
| 108 | 881598 | 881855 | + | NZ_CP019980.1 | Lysinibacillus sphaericus |
| 109 | 3607353 | 3607622 | - | NZ_CP045295.1 | Paenibacillus cellulositrophicus |
| 110 | 219896 | 220165 | + | NC_017672.3 | Paenibacillus mucilaginosus K02 |
| 111 | 3103503 | 3103760 | - | NZ_CP031223.1 | Psychrobacillus glaciei |
| 112 | 2702158 | 2702427 | + | NZ_CP041217.1 | Saccharibacillus brassicae |
| 113 | 3168653 | 3168922 | + | NZ_CP009709.1 | Weizmannia coagulans DSM 1 = ATCC 7050 |
| 114 | 241302 | 241562 | + | NZ_CP048104.1 | Kroppenstedtia pulmonis |
| 115 | 2494624 | 2494893 | + | NZ_CP045298.1 | Paenibacillus brasilensis |
| 116 | 856556 | 856822 | + | NC_014377.1 | Thermosediminibacter oceani DSM 16646 |
| 117 | 201178 | 201447 | + | NZ_CP034346.1 | Paenibacillus lutimineralis |
| 118 | 2670177 | 2670437 | - | NZ_CP041666.1 | Radiobacillus deserti |
| 119 | 5097075 | 5097323 | - | NZ_CP032365.1 | Bacillus wiedmannii |
| 120 | 218778 | 219047 | + | NZ_CP009286.1 | Paenibacillus stellifer |
| 121 | 5446057 | 5446326 | - | NZ_CP020028.1 | Paenibacillus kribbensis |
| 122 | 1791417 | 1791686 | + | NC_016641.1 | Paenibacillus terrae HPL-003 |
| 123 | 886285 | 886542 | + | NZ_CP017560.1 | Sporosarcina ureilytica |
| 124 | 2470713 | 2470982 | + | NZ_CP011058.1 | Paenibacillus beijingensis |
| 125 | 1496348 | 1496608 | + | NZ_CP022437.1 | Virgibacillus necropolis |
| 126 | 282300 | 282548 | + | NZ_CP040336.1 | Bacillus luti |
| 127 | 4891680 | 4891928 | - | NZ_CP064875.1 | Bacillus toyonensis |
| 128 | 2263959 | 2264177 | + | NZ_CP021434.1 | Tumebacillus avium |
| 129 | 712218 | 712472 | + | NZ_CP011361.2 | Salimicrobium jeotgali |
| 130 | 176230 | 176487 | + | NZ_CP038012.1 | Sporosarcina pasteurii |
| 131 | 2769516 | 2769782 | - | NZ_CP059066.1 | Koleobacter methoxysyntrophicus |
| 132 | 961424 | 961681 | + | NZ_CP038015.1 | Paenisporosarcina antarctica |
| 133 | 4872683 | 4872931 | - | NC_007530.2 | Bacillus anthracis str. 'Ames Ancestor' |
| 134 | 431558 | 431776 | + | NZ_LR134338.1 | Brevibacillus brevis |
| 135 | 2779748 | 2780005 | + | NZ_LR134338.1 | Brevibacillus brevis |
| 136 | 6307548 | 6307805 | - | NZ_LR134338.1 | Brevibacillus brevis |
| 137 | 1164421 | 1164651 | + | NZ_CP026363.1 | Brevibacillus agri |
| 138 | 845432 | 845692 | + | NZ_CP026363.1 | Brevibacillus agri |
| 139 | 1099286 | 1099543 | - | NZ_CP015108.1 | Sporosarcina ureae |
| 140 | 756950 | 757216 | + | NZ_CP015108.1 | Sporosarcina ureae |
| 141 | 4142309 | 4142557 | - | NZ_CP053989.1 | Niallia circulans |
| 142 | 3759360 | 3759611 | + | NZ_CP013862.1 | Lentibacillus amyloliquefaciens |
| 143 | 3871051 | 3871290 | - | NZ_CP022657.1 | Tumebacillus algifaecis |
| 144 | 1893368 | 1893634 | - | NZ_CP047602.1 | Thermoanaerobacterium aotearoense |
| 145 | 670802 | 671068 | + | NC_015555.1 | Thermoanaerobacterium xylanolyticum LX-11 |
| 146 | 787874 | 788140 | + | NC_014410.1 | Thermoanaerobacterium thermosaccharolyticum DSM 571 |
| 147 | 2767664 | 2767915 | - | NZ_CP024848.1 | Oceanobacillus zhaokaii |
| 148 | 1913443 | 1913697 | - | NZ_CP031092.1 | Salicibibacter kimchii |
| 149 | 1770771 | 1771037 | - | NC_003869.1 | Caldanaerobacter subterraneus subsp. tengcongensis MB4 |
| 150 | 3257822 | 3258082 | - | NZ_CP023704.1 | Caldibacillus thermoamylovorans |
| 151 | 1331322 | 1331585 | + | NC_016627.1 | Acetivibrio clariflavus DSM 19732 |
| 152 | 1614142 | 1614408 | - | NC_014209.1 | Thermoanaerobacter mathranii subsp. mathranii str. A3 |
| 153 | 1649526 | 1649792 | - | NC_013921.1 | Thermoanaerobacter italicus Ab9 |
| 154 | 721461 | 721727 | + | NC_014964.1 | Thermoanaerobacter brockii subsp. finnii Ako-1 |
| 155 | 1799109 | 1799375 | - | NC_015958.1 | Thermoanaerobacter wiegelii Rt8.B1 |
| 156 | 3228630 | 3228896 | + | NZ_CP008876.1 | Terribacillus goriensis |
| 157 | 1625669 | 1625935 | - | NZ_CP009170.1 | Thermoanaerobacter kivui |
| 158 | 802296 | 802556 | + | NZ_CP036523.1 | Peptacetobacter hiranonis |
| 159 | 4466306 | 4466572 | + | NZ_CP017269.1 | Geosporobacter ferrireducens |
| 160 | 487278 | 487544 | + | NC_013205.1 | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
| 161 | 244892 | 245155 | + | NC_013205.1 | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
| 162 | 734784 | 735041 | + | NC_018704.1 | Amphibacillus xylanus NBRC 15112 |
| 163 | 2490658 | 2490924 | - | NZ_CP016502.1 | Acetivibrio thermocellus DSM 2360 |
| 164 | 615501 | 615755 | + | NZ_AP023367.1 | Anaerocolumna cellulosilytica |
| 165 | 2779477 | 2779749 | - | NZ_CP029797.1 | Paraliobacillus zengyii |
| 166 | 1492696 | 1492953 | - | NZ_LR130778.1 | Petrocella atlantisensis |
| 167 | 1454517 | 1454780 | - | NC_019978.1 | Halobacteroides halobius DSM 5150 |
| 168 | 2547294 | 2547548 | + | NZ_CP035485.1 | Salicibibacter halophilus |
| 169 | 704041 | 704307 | + | NZ_CP023434.1 | Suicoccus acidiformans |
| 170 | 520357 | 520623 | + | NZ_CP019573.1 | Abyssicoccus albus |
| 171 | 2642127 | 2642390 | + | NZ_CP070062.1 | Coprococcus comes |
| 172 | 5957625 | 5957894 | - | NZ_CP036401.1 | Massilia albidiflava |
| 173 | 5877063 | 5877332 | + | NZ_CP040017.1 | Massilia umbonata |
| 174 | 1253135 | 1253401 | - | NZ_LR134524.1 | Peptoniphilus harei |
| 175 | 5044910 | 5045179 | - | NZ_HG322949.1 | Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 |
| 176 | 110456 | 110716 | + | NC_014657.1 | Caldicellulosiruptor owensensis OL |
| 177 | 2691179 | 2691439 | - | NZ_CP034791.1 | Caldicellulosiruptor changbaiensis |
| 178 | 2580856 | 2581116 | - | NC_009437.1 | Caldicellulosiruptor saccharolyticus DSM 8903 |
| 179 | 2641407 | 2641667 | - | NC_014720.1 | Caldicellulosiruptor kronotskyensis 2002 |
| 180 | 187129 | 187389 | + | NC_012034.1 | Caldicellulosiruptor bescii DSM 6725 |
| 181 | 2596724 | 2596984 | - | NC_014652.1 | Caldicellulosiruptor hydrothermalis 108 |
| 182 | 174860 | 175141 | + | NC_011899.1 | Halothermothrix orenii H 168 |
| 183 | 1592777 | 1593049 | - | NZ_CP068564.1 | Keratinibaculum paraultunense |
| 184 | 3634368 | 3634634 | + | NZ_CP029487.1 | Eubacterium maltosivorans |
| 185 | 186948 | 187223 | + | NZ_CP029487.1 | Eubacterium maltosivorans |
| 186 | 2321690 | 2321956 | - | NZ_AP021898.1 | Akkermansia muciniphila |
| 187 | 2460172 | 2460432 | - | NC_014393.1 | Clostridium cellulovorans 743B |
| 188 | 1443543 | 1443818 | + | NC_014624.2 | Eubacterium callanderi |
| 189 | 3173811 | 3174086 | + | NZ_CP019962.1 | Eubacterium limosum |
| 190 | 4604605 | 4604874 | + | NZ_CP018099.1 | Caldithrix abyssi DSM 13497 |
| 191 | 3225514 | 3225783 | + | NC_013851.1 | Allochromatium vinosum DSM 180 |
| 192 | 2690275 | 2690538 | - | NZ_CP025197.1 | Acetivibrio saccincola |
| 193 | 948912 | 949178 | + | NC_013891.1 | Listeria seeligeri serovar 1/2b str. SLCC3954 |
| 194 | 1007697 | 1007963 | + | NZ_LT906444.1 | Listeria welshimeri |
| 195 | 1048083 | 1048349 | + | NZ_CP009577.1 | Listeria ivanovii subsp. ivanovii |
| 196 | 1032924 | 1033190 | + | NC_003210.1 | Listeria monocytogenes EGD-e |
| 197 | 2092124 | 2092360 | - | NC_010794.1 | Methylacidiphilum infernorum V4 |
| 198 | 613784 | 614050 | + | NZ_CP024610.1 | Lactobacillus terrae |
| 199 | 1877007 | 1877273 | - | NZ_LR134483.1 | Listeria grayi |
| 200 | 3260269 | 3260535 | + | NZ_CP036150.1 | Oceanispirochaeta crateris |
| 201 | 2169770 | 2169976 | - | NZ_LT906446.1 | Megamonas hypermegale |
| 202 | 616511 | 616777 | + | NZ_CP014161.1 | Aerococcus urinae |
| 203 | 935470 | 935736 | + | NZ_CP054482.1 | Macrococcus bohemicus |
| 204 | 1619157 | 1619363 | - | NZ_CP022046.2 | Mammaliicoccus sciuri |
| 205 | 2333909 | 2334178 | + | NZ_CP039268.1 | Thermochromatium tepidum ATCC 43061 |
| 206 | 1377630 | 1377896 | - | NZ_LS483306.1 | Enterococcus cecorum |
| 207 | 403062 | 403328 | - | NZ_CP049887.1 | Vagococcus hydrophili |
| 208 | 1410984 | 1411253 | + | NC_014136.1 | Leuconostoc kimchii IMSNU 11154 |
| 209 | 536751 | 536957 | + | NZ_CP068061.1 | Mammaliicoccus vitulinus |
| 210 | 6708791 | 6709060 | + | NZ_CP018632.1 | Granulosicoccus antarcticus IMCC3135 |
| 211 | 704941 | 705207 | + | NZ_LT906464.1 | Staphylococcus muscae |
| 212 | 2350732 | 2351001 | - | NZ_CP041730.1 | Chitinimonas arctica |
| 213 | 1225262 | 1225468 | + | NZ_CP014159.1 | Aerococcus christensenii |
| 214 | 95674 | 95943 | + | NZ_CP042410.1 | Leuconostoc citreum |
| 215 | 2433365 | 2433622 | - | NZ_CP023536.1 | Providencia alcalifaciens |
| 216 | 5051742 | 5052005 | + | NZ_CP035758.1 | Ktedonosporobacter rubrisoli |
| 217 | 1841216 | 1841476 | - | NZ_HG917868.1 | Clostridium bornimense |
| 218 | 589681 | 589947 | + | NZ_CP019981.1 | Pediococcus inopinatus |
| 219 | 336272 | 336541 | + | NZ_CP065993.1 | Leuconostoc pseudomesenteroides |
| 220 | 2400409 | 2400654 | - | NC_010571.1 | Opitutus terrae PB90-1 |
| 221 | 197154 | 197420 | - | NZ_CP012294.1 | Pediococcus damnosus |
| 222 | 9174036 | 9174242 | - | NC_020126.1 | Myxococcus stipitatus DSM 14675 |
| 223 | 1922128 | 1922379 | + | NZ_HG916765.1 | Castellaniella defragrans 65Phen |
| 224 | 1571086 | 1571313 | + | NZ_CP014223.1 | Anaerotignum propionicum DSM 1682 |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP033052.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF14527.8 | 0.75 | 160 | 52 | same-strand | WhiA LAGLIDADG-like domain |
| 2 | PF02650.16 | 0.75 | 160 | 52 | same-strand | WhiA C-terminal HTH domain |
| 3 | PF10298.11 | 0.75 | 160 | 52 | same-strand | WhiA N-terminal LAGLIDADG-like domain |
| 4 | PF01933.20 | 0.67 | 143 | 1046.5 | same-strand | 2-phospho-L-lactate transferase CofD |
| 5 | PF03668.17 | 0.71 | 151 | 2035.0 | same-strand | P-loop ATPase protein family |
++ More..