Result : L8EBJ6
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Probable small spore coat assembly protein B (ORF-62) |
| NCBI Accession ID | AL009126.3 |
| Organism | Bacillus subtilis (strain 168) |
| Left | 1071613 |
| Right | 1071699 |
| Strand | + |
| Nucleotide Sequence | ATGGGTGAAGTATTTGCAGGCGGATTCGCTTTATTGGTTGTGTTATTTATTTTATTGATTATCATCGGCGCTTCTTGGCTGTACTAA |
| Sequence | MGEVFAGGFALLVVLFILLIIIGASWLY |
| Source of smORF | Swiss-Prot |
| Function | |
| Pubmed ID | 9384377 29280348 21670523 |
| Domain | |
| Functional Category | Others |
| Uniprot ID | L8EBJ6 |
| ORF Length (Amino Acid) | 28 |
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| Conservation Analysis |
No. of Species: 52
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1071613 | 1071699 | + | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 2 | 430185 | 430274 | - | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 3 | 920840 | 920926 | - | NZ_CP029364.1 | Bacillus halotolerans |
| 4 | 3829699 | 3829788 | - | NZ_CP029364.1 | Bacillus halotolerans |
| 5 | 3554059 | 3554148 | - | NZ_CP029364.1 | Bacillus halotolerans |
| 6 | 2929192 | 2929269 | - | NZ_CP029364.1 | Bacillus halotolerans |
| 7 | 1055908 | 1055994 | + | NZ_CP013984.1 | Bacillus inaquosorum |
| 8 | 1044273 | 1044359 | + | NZ_CP034943.1 | Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 |
| 9 | 1075457 | 1075543 | + | NZ_CP051464.1 | Bacillus mojavensis |
| 10 | 2224726 | 2224815 | + | NZ_CP051464.1 | Bacillus mojavensis |
| 11 | 2478693 | 2478782 | + | NZ_CP051464.1 | Bacillus mojavensis |
| 12 | 3120287 | 3120364 | + | NZ_CP051464.1 | Bacillus mojavensis |
| 13 | 998198 | 998284 | + | NZ_CP053376.1 | Bacillus amyloliquefaciens |
| 14 | 1857918 | 1858016 | - | NZ_CP053376.1 | Bacillus amyloliquefaciens |
| 15 | 1251897 | 1251983 | + | NZ_CP033052.1 | Bacillus vallismortis |
| 16 | 2948579 | 2948665 | - | NZ_CP011937.1 | Bacillus velezensis |
| 17 | 2097960 | 2098058 | + | NZ_CP011937.1 | Bacillus velezensis |
| 18 | 1003957 | 1004043 | + | NZ_CP048852.1 | Bacillus tequilensis |
| 19 | 406439 | 406528 | - | NZ_CP048852.1 | Bacillus tequilensis |
| 20 | 645546 | 645635 | - | NZ_CP017786.1 | Bacillus xiamenensis |
| 21 | 511673 | 511762 | - | NZ_CP043404.1 | Bacillus safensis |
| 22 | 3163256 | 3163348 | - | NZ_CP043404.1 | Bacillus safensis |
| 23 | 982984 | 983073 | + | NZ_CP011150.1 | Bacillus altitudinis |
| 24 | 1411210 | 1411293 | + | NZ_CP053989.1 | Niallia circulans |
| 25 | 971330 | 971416 | - | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 26 | 1807068 | 1807166 | + | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 27 | 2023290 | 2023385 | + | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 28 | 871065 | 871151 | + | NZ_CP012024.1 | Bacillus smithii |
| 29 | 871189 | 871275 | + | NZ_CP012024.1 | Bacillus smithii |
| 30 | 460990 | 461085 | + | NZ_CP012024.1 | Bacillus smithii |
| 31 | 1617227 | 1617310 | + | NZ_CP042593.1 | Bacillus dafuensis |
| 32 | 1617347 | 1617433 | + | NZ_CP042593.1 | Bacillus dafuensis |
| 33 | 650891 | 650977 | + | NZ_CP017703.1 | Aeribacillus pallidus |
| 34 | 493410 | 493502 | - | NZ_CP012152.1 | Anoxybacillus gonensis |
| 35 | 3214273 | 3214359 | + | NZ_CP070511.1 | Parageobacillus toebii |
| 36 | 1986654 | 1986752 | + | NZ_CP070511.1 | Parageobacillus toebii |
| 37 | 145118 | 145213 | + | NZ_CP070511.1 | Parageobacillus toebii |
| 38 | 2215802 | 2215897 | + | NZ_CP018866.1 | Sutcliffiella cohnii |
| 39 | 3289435 | 3289518 | - | NZ_CP016020.1 | Bacillus weihaiensis |
| 40 | 1531010 | 1531105 | - | NZ_CP016020.1 | Bacillus weihaiensis |
| 41 | 3289567 | 3289653 | - | NZ_CP016020.1 | Bacillus weihaiensis |
| 42 | 3289764 | 3289847 | - | NZ_CP016020.1 | Bacillus weihaiensis |
| 43 | 3290122 | 3290205 | - | NZ_CP016020.1 | Bacillus weihaiensis |
| 44 | 1883129 | 1883218 | + | NZ_CP016020.1 | Bacillus weihaiensis |
| 45 | 1223396 | 1223482 | + | NZ_CP009416.1 | Jeotgalibacillus malaysiensis |
| 46 | 2180281 | 2180367 | - | NC_017668.1 | Halobacillus halophilus DSM 2266 |
| 47 | 1275636 | 1275722 | + | NC_002570.2 | Alkalihalobacillus halodurans C-125 |
| 48 | 1223614 | 1223697 | + | NC_022524.1 | Bacillus infantis NRRL B-14911 |
| 49 | 2268623 | 2268706 | - | NZ_CP022437.1 | Virgibacillus necropolis |
| 50 | 3033710 | 3033793 | - | NZ_CP022315.1 | Virgibacillus phasianinus |
| 51 | 878006 | 878107 | + | NZ_CP029797.1 | Paraliobacillus zengyii |
| 52 | 1147388 | 1147474 | - | NZ_CP029797.1 | Paraliobacillus zengyii |
| 53 | 1640102 | 1640182 | + | NZ_CP008876.1 | Terribacillus goriensis |
| 54 | 1431507 | 1431599 | + | NZ_CP008876.1 | Terribacillus goriensis |
| 55 | 110859 | 110945 | - | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 56 | 1464223 | 1464321 | - | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 57 | 1468953 | 1469045 | - | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 58 | 1929906 | 1930007 | - | NC_018704.1 | Amphibacillus xylanus NBRC 15112 |
| 59 | 979901 | 979984 | + | NZ_CP013862.1 | Lentibacillus amyloliquefaciens |
| 60 | 795725 | 795823 | + | NZ_CP061470.1 | Geobacillus zalihae |
| 61 | 3340199 | 3340288 | - | NZ_CP061470.1 | Geobacillus zalihae |
| 62 | 1010886 | 1010984 | + | NZ_CP061470.1 | Geobacillus zalihae |
| 63 | 3124798 | 3124884 | + | NZ_CP063356.1 | Anaerobacillus isosaccharinicus |
| 64 | 1943873 | 1943956 | - | NZ_CP068053.1 | Peribacillus psychrosaccharolyticus |
| 65 | 1096260 | 1096358 | + | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 66 | 1612147 | 1612236 | + | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 67 | 1294243 | 1294341 | + | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 68 | 2322038 | 2322136 | - | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 69 | 3331968 | 3332057 | + | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 70 | 2142749 | 2142844 | - | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 71 | 1617639 | 1617737 | + | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 72 | 673300 | 673389 | - | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 73 | 1817969 | 1818067 | + | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 74 | 1764277 | 1764375 | - | NZ_CP014342.1 | Geobacillus subterraneus |
| 75 | 2624874 | 2624963 | + | NZ_CP014342.1 | Geobacillus subterraneus |
| 76 | 1543850 | 1543936 | - | NZ_CP014342.1 | Geobacillus subterraneus |
| 77 | 2848581 | 2848679 | - | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 78 | 1362631 | 1362720 | - | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 79 | 1258070 | 1258168 | - | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 80 | 2924657 | 2924743 | - | NZ_CP065425.1 | Heyndrickxia vini |
| 81 | 2140303 | 2140401 | - | NZ_LT603683.1 | Bacillus glycinifermentans |
| 82 | 3903455 | 3903538 | + | NC_006270.3 | Bacillus licheniformis DSM 13 = ATCC 14580 |
| 83 | 734937 | 735026 | + | NC_013791.2 | Alkalihalobacillus pseudofirmus OF4 |
| 84 | 1340128 | 1340214 | - | NC_013791.2 | Alkalihalobacillus pseudofirmus OF4 |
| 85 | 1229133 | 1229222 | + | NZ_CP031092.1 | Salicibibacter kimchii |
| 86 | 4153499 | 4153597 | + | NZ_CP024035.1 | Priestia aryabhattai |
| 87 | 3031474 | 3031560 | - | NZ_LS483476.1 | Lederbergia lentus |
| 88 | 1322672 | 1322758 | - | NZ_CP015378.1 | Fictibacillus phosphorivorans |
| 89 | 47359 | 47457 | - | NZ_CP038015.1 | Paenisporosarcina antarctica |
| 90 | 4108450 | 4108533 | + | NZ_CP023665.1 | Bacillus paralicheniformis |
| 91 | 4141514 | 4141615 | + | NZ_CP018622.1 | Virgibacillus dokdonensis |
| 92 | 1602932 | 1603030 | + | NZ_CP024848.1 | Oceanobacillus zhaokaii |
| 93 | 1632897 | 1632998 | - | NZ_CP024848.1 | Oceanobacillus zhaokaii |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000964.3
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF13616.8 | 0.63 | 33 | 370.0 | opposite-strand | PPIC-type PPIASE domain |
| 2 | PF00639.23 | 0.63 | 33 | 370.0 | opposite-strand | PPIC-type PPIASE domain |
| 3 | PF13145.8 | 0.63 | 33 | 370.0 | opposite-strand | PPIC-type PPIASE domain |
| 4 | PF01047.24 | 0.63 | 33 | 1415.0 | opposite-strand | MarR family |
| 5 | PF13463.8 | 0.62 | 32 | 1414 | opposite-strand | Winged helix DNA-binding domain |
++ More..