Result : C5D9S1
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | UPF0741 protein GWCH70_3359 |
| NCBI Accession ID | CP001638.1 |
| Organism | Geobacillus sp. (strain WCH70) |
| Left | 3387584 |
| Right | 3387811 |
| Strand | - |
| Nucleotide Sequence | ATGGCGAATGAATTTCGCGTCTGTGACGATTGTAAAGCGCCAAATTTAAAAACGTTGATTCCCCGTTTGAAAAAGCTGGATCCAAACGCGACGATTAAAATTGGCTGCCAGTCGTATTGCGGTCCCGGCCGCAAAAAAACGTTTGCCTTTGTCAATAACCGTCCAGTCTCCGCGCTGACAGAAGATGAGCTTATTGAAAAAATTGCCGAAAGATTAAAGAAAAGCTAA |
| Sequence | MANEFRVCDDCKAPNLKTLIPRLKKLDPNATIKIGCQSYCGPGRKKTFAFVNNRPVSALTEDELIEKIAERLKKS |
| Source of smORF | Swiss-Prot |
| Function | |
| Pubmed ID | |
| Domain | |
| Functional Category | Others |
| Uniprot ID | C5D9S1 |
| ORF Length (Amino Acid) | 75 |
++ More..
| Conservation Analysis |
No. of Species: 73
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 551143 | 551370 | + | NZ_CP070511.1 | Parageobacillus toebii |
| 2 | 704466 | 704693 | + | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 3 | 3321295 | 3321522 | + | NZ_CP014342.1 | Geobacillus subterraneus |
| 4 | 3453939 | 3454166 | - | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 5 | 2616559 | 2616786 | - | NZ_CP061470.1 | Geobacillus zalihae |
| 6 | 2484195 | 2484422 | + | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 7 | 363136 | 363363 | + | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 8 | 2692347 | 2692571 | - | NZ_CP012152.1 | Anoxybacillus gonensis |
| 9 | 3029089 | 3029316 | - | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 10 | 3850079 | 3850303 | - | NZ_CP023704.1 | Caldibacillus thermoamylovorans |
| 11 | 304955 | 305182 | + | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 12 | 3253704 | 3253925 | - | NZ_CP012024.1 | Bacillus smithii |
| 13 | 864341 | 864565 | + | NZ_CP017703.1 | Aeribacillus pallidus |
| 14 | 4973524 | 4973748 | - | NZ_CP053989.1 | Niallia circulans |
| 15 | 75481 | 75705 | + | NZ_CP016020.1 | Bacillus weihaiensis |
| 16 | 1949947 | 1950168 | + | NZ_CP017786.1 | Bacillus xiamenensis |
| 17 | 3399474 | 3399695 | - | NZ_CP011150.1 | Bacillus altitudinis |
| 18 | 1895329 | 1895550 | + | NZ_CP043404.1 | Bacillus safensis |
| 19 | 4453554 | 4453778 | - | NZ_CP018866.1 | Sutcliffiella cohnii |
| 20 | 2298427 | 2298648 | - | NZ_CP030926.1 | Peribacillus butanolivorans |
| 21 | 4318229 | 4318456 | - | NZ_CP010820.1 | Lysinibacillus fusiformis |
| 22 | 2723225 | 2723446 | + | NZ_CP017704.1 | Peribacillus simplex NBRC 15720 = DSM 1321 |
| 23 | 2846127 | 2846351 | - | NZ_CP038015.1 | Paenisporosarcina antarctica |
| 24 | 506695 | 506922 | + | NZ_CP006837.1 | Lysinibacillus varians |
| 25 | 4163293 | 4163520 | - | NZ_CP019980.1 | Lysinibacillus sphaericus |
| 26 | 33313 | 33537 | + | NZ_CP040336.1 | Bacillus luti |
| 27 | 5119400 | 5119624 | - | NC_007530.2 | Bacillus anthracis str. 'Ames Ancestor' |
| 28 | 5307906 | 5308130 | - | NC_011725.1 | Bacillus cereus B4264 |
| 29 | 4240509 | 4240733 | - | NZ_LT603683.1 | Bacillus glycinifermentans |
| 30 | 337361 | 337585 | + | NZ_CP011937.1 | Bacillus velezensis |
| 31 | 3956216 | 3956440 | - | NZ_CP024109.1 | Bacillus cytotoxicus |
| 32 | 4696426 | 4696650 | - | NZ_CP042593.1 | Bacillus dafuensis |
| 33 | 5344632 | 5344856 | - | NZ_CP032365.1 | Bacillus wiedmannii |
| 34 | 4015804 | 4016028 | - | NZ_CP023665.1 | Bacillus paralicheniformis |
| 35 | 5142495 | 5142719 | - | NZ_CP064875.1 | Bacillus toyonensis |
| 36 | 3713170 | 3713394 | - | NZ_CP053376.1 | Bacillus amyloliquefaciens |
| 37 | 3675482 | 3675706 | - | NZ_CP051464.1 | Bacillus mojavensis |
| 38 | 3750637 | 3750861 | - | NZ_CP013984.1 | Bacillus inaquosorum |
| 39 | 3729338 | 3729562 | - | NZ_CP033052.1 | Bacillus vallismortis |
| 40 | 3694423 | 3694647 | - | NZ_CP048852.1 | Bacillus tequilensis |
| 41 | 3684949 | 3685173 | - | NZ_CP034943.1 | Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 |
| 42 | 2378700 | 2378924 | + | NZ_CP029364.1 | Bacillus halotolerans |
| 43 | 3860998 | 3861222 | - | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 44 | 3810480 | 3810704 | - | NC_006270.3 | Bacillus licheniformis DSM 13 = ATCC 14580 |
| 45 | 4941546 | 4941770 | - | NZ_CP024035.1 | Priestia aryabhattai |
| 46 | 657576 | 657803 | + | NZ_CP031223.1 | Psychrobacillus glaciei |
| 47 | 4536330 | 4536554 | - | NC_022524.1 | Bacillus infantis NRRL B-14911 |
| 48 | 4458275 | 4458511 | - | NC_014829.1 | Evansella cellulosilytica DSM 2522 |
| 49 | 2128128 | 2128352 | + | NZ_CP041305.1 | Cytobacillus ciccensis |
| 50 | 3711245 | 3711469 | - | NC_013791.2 | Alkalihalobacillus pseudofirmus OF4 |
| 51 | 3946534 | 3946758 | - | NC_002570.2 | Alkalihalobacillus halodurans C-125 |
| 52 | 118651 | 118887 | + | NZ_CP012502.1 | Bacillus beveridgei |
| 53 | 1327618 | 1327839 | - | NZ_CP063356.1 | Anaerobacillus isosaccharinicus |
| 54 | 890705 | 890956 | - | NZ_CP053187.1 | Turicibacter sanguinis |
| 55 | 2419935 | 2420174 | + | NZ_CP013023.1 | Paenibacillus bovis |
| 56 | 4411291 | 4411518 | + | NZ_CP041217.1 | Saccharibacillus brassicae |
| 57 | 4174626 | 4174847 | + | NZ_CP045298.1 | Paenibacillus brasilensis |
| 58 | 3705491 | 3705712 | - | NZ_CP020028.1 | Paenibacillus kribbensis |
| 59 | 3610855 | 3611076 | + | NC_016641.1 | Paenibacillus terrae HPL-003 |
| 60 | 4610329 | 4610559 | - | NZ_CP011388.1 | Paenibacillus swuensis |
| 61 | 2127540 | 2127767 | + | NC_017672.3 | Paenibacillus mucilaginosus K02 |
| 62 | 3524045 | 3524266 | - | NZ_CP045293.1 | Paenibacillus guangzhouensis |
| 63 | 1115033 | 1115257 | + | NZ_CP019659.1 | Paenibacillus larvae subsp. larvae |
| 64 | 5034401 | 5034622 | + | NZ_CP016809.1 | Paenibacillus ihbetae |
| 65 | 4426085 | 4426318 | - | NZ_CP034346.1 | Paenibacillus lutimineralis |
| 66 | 139496 | 139726 | - | NZ_CP011058.1 | Paenibacillus beijingensis |
| 67 | 514513 | 514737 | + | NZ_AP017312.1 | Aneurinibacillus soli |
| 68 | 2342027 | 2342266 | + | NZ_CP009428.1 | Paenibacillus odorifer |
| 69 | 581144 | 581365 | + | NZ_CP013652.1 | Paenibacillus naphthalenovorans |
| 70 | 4251100 | 4251336 | - | NZ_CP034248.1 | Paenibacillus lentus |
| 71 | 1857424 | 1857606 | - | NZ_CP035492.1 | Paenibacillus protaetiae |
| 72 | 6099078 | 6099302 | + | NZ_CP048286.1 | Paenibacillus rhizovicinus |
| 73 | 1460884 | 1461108 | + | NC_019897.1 | Thermobacillus composti KWC4 |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP070511.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF03099.21 | 0.67 | 49 | 1272 | same-strand | Biotin/lipoate A/B protein ligase family |
| 2 | PF01966.24 | 0.74 | 54 | 183.0 | same-strand | HD domain |
++ More..