Result : C5BW33
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 50S ribosomal protein L35 |
| NCBI Accession ID | CP001618.1 |
| Organism | Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) |
| Left | 2672898 |
| Right | 2673092 |
| Strand | - |
| Nucleotide Sequence | ATGCCGAAGAACAAGACGAACTCCGGTGCGAAGAAGCGTTTCCGTGTGACCGGAAGCGGCAAGATCATGCACAAGCGAGCTCACCAGACCCACAAGTTCGAGGAGCGCAGCCGCAGCAGCGTCCGCCGGCTCTCGAACGACGCCGAGGTCTCCTCGGCGGACCGCAAGTCGATCAAGAAGCTGCTCGGCAAGTAA |
| Sequence | MPKNKTNSGAKKRFRVTGSGKIMHKRAHQTHKFEERSRSSVRRLSNDAEVSSADRKSIKKLLGK |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl00392. Profile Description: Ribosomal protein L35. This ribosomal protein is found in bacteria and organelles only. It is not closely related to any eukaryotic or archaeal ribosomal protein. [Protein synthesis, Ribosomal proteins: synthesis and modification] |
| Pubmed ID | 21304633 |
| Domain | CDD:412354 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | C5BW33 |
| ORF Length (Amino Acid) | 64 |
++ More..
| Conservation Analysis |
No. of Species: 277
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2672898 | 2673092 | - | NC_012669.1 | Beutenbergia cavernae DSM 12333 |
| 2 | 2249333 | 2249527 | - | NZ_CP038213.1 | Ornithinimicrobium flavum |
| 3 | 1897909 | 1898103 | - | NZ_CP040887.1 | Serinicoccus chungangensis |
| 4 | 1909601 | 1909795 | - | NZ_CP013290.1 | Janibacter indicus |
| 5 | 169553 | 169747 | + | NZ_CP014989.1 | Serinicoccus hydrothermalis |
| 6 | 536235 | 536429 | + | NZ_CP044548.2 | Janibacter melonis |
| 7 | 1981125 | 1981319 | - | NZ_CP044427.1 | Ornithinimicrobium pratense |
| 8 | 2267928 | 2268122 | - | NZ_CP033325.1 | Georgenia faecalis |
| 9 | 2842372 | 2842566 | + | NZ_CP011112.1 | Luteipulveratus mongoliensis |
| 10 | 2366052 | 2366246 | + | NZ_CP041694.1 | Cellulosimicrobium cellulans |
| 11 | 1800428 | 1800622 | + | NC_015514.1 | Cellulomonas fimi ATCC 484 |
| 12 | 1737955 | 1738149 | - | NZ_CP025227.1 | Actinomyces wuliandei |
| 13 | 2141793 | 2141987 | - | NC_015671.1 | Cellulomonas gilvus ATCC 13127 |
| 14 | 3822834 | 3823028 | + | NC_009664.2 | Kineococcus radiotolerans SRS30216 = ATCC BAA-149 |
| 15 | 6905142 | 6905336 | + | NZ_CP011340.1 | Streptomyces pristinaespiralis |
| 16 | 2077498 | 2077692 | - | NZ_CP051884.1 | Cellulomonas taurus |
| 17 | 1751870 | 1752064 | - | NZ_CP059991.1 | Streptomyces gardneri |
| 18 | 1805933 | 1806127 | + | NC_014151.1 | Cellulomonas flavigena DSM 20109 |
| 19 | 2236315 | 2236509 | - | NZ_CP039291.1 | Cellulomonas shaoxiangyii |
| 20 | 4262161 | 4262352 | - | NZ_CP022753.1 | Nocardiopsis gilva YIM 90087 |
| 21 | 2031513 | 2031707 | - | NZ_LR134501.1 | Nocardiopsis dassonvillei |
| 22 | 2048489 | 2048683 | - | NZ_CP039292.1 | Actinomyces procaprae |
| 23 | 907228 | 907422 | + | NZ_CP066060.1 | Actinomyces oris |
| 24 | 347939 | 348133 | - | NZ_CP066049.1 | Actinomyces naeslundii |
| 25 | 1161594 | 1161788 | - | NZ_LR134477.1 | Actinomyces viscosus |
| 26 | 865286 | 865480 | + | NZ_CP020468.1 | Actinomyces gaoshouyii |
| 27 | 723190 | 723384 | + | NZ_LR134357.1 | Actinomyces israelii |
| 28 | 823136 | 823330 | - | NZ_LR134350.1 | Actinomyces howellii |
| 29 | 1036639 | 1036833 | + | NZ_CP066802.1 | Actinomyces weissii |
| 30 | 1312855 | 1313049 | - | NZ_CP029196.1 | Streptomyces venezuelae |
| 31 | 1805908 | 1806102 | - | NZ_CP023691.1 | Streptomyces platensis |
| 32 | 962513 | 962707 | - | NZ_CP066065.1 | Schaalia meyeri |
| 33 | 1597413 | 1597607 | - | NZ_CP023693.1 | Streptomyces cinereoruber |
| 34 | 6026852 | 6027046 | + | NZ_CP034279.1 | Streptomyces ficellus |
| 35 | 1703837 | 1704031 | - | NZ_CP010407.1 | Streptomyces vietnamensis |
| 36 | 2289801 | 2289995 | - | NZ_CP020569.1 | Streptomyces gilvosporeus |
| 37 | 2578546 | 2578740 | - | NZ_CP070326.1 | Streptomyces noursei |
| 38 | 1778925 | 1779119 | - | NZ_CP019457.1 | Streptomyces lydicus |
| 39 | 1486631 | 1486825 | - | NZ_CP053642.1 | Actinomyces marmotae |
| 40 | 1845152 | 1845346 | - | NZ_CP031356.1 | Brachybacterium saurashtrense |
| 41 | 5906207 | 5906401 | + | NZ_CP023692.1 | Streptomyces vinaceus |
| 42 | 751693 | 751887 | - | NZ_CP034438.1 | Flaviflexus salsibiostraticola |
| 43 | 1399239 | 1399433 | - | NZ_CP072931.1 | Streptomyces auratus AGR0001 |
| 44 | 465211 | 465405 | - | NZ_CP029188.1 | Streptomyces tirandamycinicus |
| 45 | 357405 | 357599 | - | NZ_CP029254.1 | Streptomyces spongiicola |
| 46 | 993237 | 993431 | - | NZ_CP017316.1 | Streptomyces rubrolavendulae |
| 47 | 1018298 | 1018492 | - | NZ_CP023696.1 | Streptomyces fradiae ATCC 10745 = DSM 40063 |
| 48 | 2611168 | 2611362 | - | NZ_LR134363.1 | Actinomyces slackii |
| 49 | 2823932 | 2824126 | + | NZ_CP035494.1 | Microbacterium protaetiae |
| 50 | 507637 | 507831 | - | NZ_CP009922.3 | Streptomyces xiamenensis |
| 51 | 2387027 | 2387221 | - | NZ_CP071139.1 | Streptomyces nojiriensis |
| 52 | 559653 | 559847 | - | NZ_CP007519.1 | Trueperella pyogenes |
| 53 | 735954 | 736148 | - | NZ_CP054938.1 | Streptomyces harbinensis |
| 54 | 5973851 | 5974045 | + | NZ_CP023701.1 | Streptomyces subrutilus |
| 55 | 6422870 | 6423064 | + | NZ_CP022310.1 | Streptomyces calvus |
| 56 | 2019476 | 2019670 | - | NZ_CP034539.1 | Streptomyces cyaneochromogenes |
| 57 | 1002866 | 1003060 | + | NZ_LT593929.1 | Propionibacterium freudenreichii |
| 58 | 1500232 | 1500426 | - | NZ_CP023407.1 | Streptomyces fungicidicus |
| 59 | 2366871 | 2367065 | - | NC_014165.1 | Thermobispora bispora DSM 43833 |
| 60 | 1115132 | 1115326 | - | NZ_CP021080.1 | Streptomyces pluripotens |
| 61 | 6747600 | 6747794 | + | NZ_CP051006.1 | Streptomyces griseofuscus |
| 62 | 2001600 | 2001794 | - | NZ_CP071839.1 | Streptomyces cyanogenus |
| 63 | 2306227 | 2306421 | - | NZ_CP034463.1 | Streptomyces aquilus |
| 64 | 2465943 | 2466137 | - | NC_013172.1 | Brachybacterium faecium DSM 4810 |
| 65 | 6977870 | 6978064 | + | NZ_CP030073.1 | Streptomyces cadmiisoli |
| 66 | 4840555 | 4840749 | - | NZ_CP030862.1 | Streptomyces globosus |
| 67 | 1279362 | 1279556 | + | NZ_CP023564.1 | Brachybacterium ginsengisoli |
| 68 | 7947348 | 7947542 | + | NZ_CP023689.1 | Streptomyces chartreusis |
| 69 | 4067654 | 4067848 | + | NZ_CP060713.1 | Nocardioides mesophilus |
| 70 | 7766568 | 7766762 | + | NZ_CP017248.1 | Streptomyces fodineus |
| 71 | 2309290 | 2309484 | - | NZ_CP047020.1 | Streptomyces broussonetiae |
| 72 | 1956944 | 1957138 | - | NC_021985.1 | Streptomyces collinus Tu 365 |
| 73 | 8000124 | 8000318 | - | NZ_CP016279.1 | Streptomyces griseochromogenes |
| 74 | 1448176 | 1448370 | + | NC_015588.1 | Isoptericola variabilis 225 |
| 75 | 1589993 | 1590187 | - | NZ_CP045096.1 | Streptomyces phaeolivaceus |
| 76 | 1704552 | 1704746 | - | NZ_CP012382.1 | Streptomyces ambofaciens ATCC 23877 |
| 77 | 1836621 | 1836815 | - | NZ_CP015098.1 | Streptomyces qaidamensis |
| 78 | 7955081 | 7955275 | + | NZ_CP022744.1 | Streptomyces lincolnensis |
| 79 | 1332604 | 1332798 | - | NZ_CP015866.1 | Streptomyces parvulus |
| 80 | 1300431 | 1300625 | - | NZ_CP029043.1 | Streptomyces nigra |
| 81 | 1714524 | 1714718 | - | NZ_CP010849.1 | Streptomyces cyaneogriseus subsp. noncyanogenus |
| 82 | 6456977 | 6457171 | + | NZ_LN831790.1 | Streptomyces leeuwenhoekii |
| 83 | 1082947 | 1083141 | + | NZ_LR131272.1 | Arthrobacter agilis |
| 84 | 1770532 | 1770726 | + | NZ_CP023563.1 | Brachybacterium vulturis |
| 85 | 7715634 | 7715828 | + | NZ_CP032427.1 | Streptomyces griseorubiginosus |
| 86 | 1294957 | 1295151 | + | NZ_CP044232.1 | Microbacterium lushaniae |
| 87 | 1338616 | 1338810 | + | NZ_CP038266.1 | Microbacterium wangchenii |
| 88 | 2192478 | 2192672 | + | NZ_CP014228.1 | Actinomyces radicidentis |
| 89 | 740093 | 740287 | - | NZ_CP022316.1 | Brachybacterium avium |
| 90 | 2456508 | 2456714 | - | NZ_CP026734.1 | Brevibacterium linens |
| 91 | 8183139 | 8183333 | + | NC_013929.1 | Streptomyces scabiei 87.22 |
| 92 | 1186447 | 1186641 | - | NZ_CP026923.1 | Pontimonas salivibrio |
| 93 | 1459323 | 1459517 | + | NZ_CP020715.1 | Cnuibacter physcomitrellae |
| 94 | 1035362 | 1035556 | - | NZ_CP032229.1 | Streptomyces seoulensis |
| 95 | 7644294 | 7644488 | + | NZ_CP023688.1 | Streptomyces rimosus |
| 96 | 1174928 | 1175122 | + | NZ_LS483423.1 | Jonesia denitrificans |
| 97 | 707561 | 707755 | - | NZ_LT635457.1 | Actinomyces pacaensis |
| 98 | 2542296 | 2542490 | - | NZ_LR134442.1 | Propionibacterium australiense |
| 99 | 1599821 | 1600015 | - | NC_012803.1 | Micrococcus luteus NCTC 2665 |
| 100 | 624347 | 624541 | + | NC_010168.1 | Renibacterium salmoninarum ATCC 33209 |
| 101 | 417879 | 418073 | + | NZ_CP011005.1 | Psychromicrobium lacuslunae |
| 102 | 1021698 | 1021892 | + | NZ_CP034412.1 | Glutamicibacter creatinolyticus |
| 103 | 2016623 | 2016817 | + | NZ_LR134476.1 | Trueperella bialowiezensis |
| 104 | 6322672 | 6322866 | - | NC_013131.1 | Catenulispora acidiphila DSM 44928 |
| 105 | 3702289 | 3702483 | + | NZ_CP042260.1 | Glutamicibacter halophytocola |
| 106 | 2675909 | 2676103 | + | NZ_AP019307.1 | Nocardioides baekrokdamisoli |
| 107 | 2622028 | 2622234 | - | NZ_CP025333.1 | Brevibacterium aurantiacum |
| 108 | 502820 | 503014 | + | NZ_CP007490.1 | Rhodoluna lacicola |
| 109 | 890985 | 891179 | - | NZ_CP018135.1 | Neomicrococcus aestuarii |
| 110 | 1858552 | 1858746 | - | NZ_CP043661.1 | Kribbella qitaiheensis |
| 111 | 3629784 | 3629978 | + | NZ_CP018863.1 | Arthrobacter crystallopoietes |
| 112 | 479565 | 479759 | + | NZ_CP040508.1 | Rhodoluna limnophila |
| 113 | 3193074 | 3193268 | + | NZ_CP015079.1 | Nocardioides dokdonensis FR1436 |
| 114 | 597797 | 597991 | - | NZ_CP038267.1 | Nocardioides euryhalodurans |
| 115 | 1087963 | 1088157 | + | NZ_CP026949.1 | Mycetocola zhujimingii |
| 116 | 1247151 | 1247345 | + | NC_014550.1 | Glutamicibacter arilaitensis Re117 |
| 117 | 1337111 | 1337305 | + | NZ_CP016282.1 | Cryobacterium arcticum |
| 118 | 1039333 | 1039527 | - | NZ_CP030033.1 | Cryobacterium soli |
| 119 | 3530107 | 3530301 | + | NZ_CP038436.1 | Nocardioides seonyuensis |
| 120 | 1177473 | 1177667 | + | NZ_CP033081.1 | Glutamicibacter nicotianae |
| 121 | 1206075 | 1206269 | + | NZ_CP047186.1 | Rathayibacter tanaceti |
| 122 | 2809944 | 2810138 | - | NZ_CP017146.1 | Marisediminicola antarctica |
| 123 | 1166261 | 1166455 | + | NZ_CP015515.1 | Rathayibacter tritici |
| 124 | 808004 | 808198 | + | NZ_CP044344.1 | Nocardioides cynanchi |
| 125 | 2691172 | 2691366 | - | NZ_CP019066.1 | Tsukamurella tyrosinosolvens |
| 126 | 2513905 | 2514099 | - | NC_014158.1 | Tsukamurella paurometabola DSM 20162 |
| 127 | 2497215 | 2497409 | - | NC_013521.1 | Sanguibacter keddieii DSM 10542 |
| 128 | 2415878 | 2416072 | + | NZ_CP049253.1 | Microbacterium amylolyticum |
| 129 | 1286620 | 1286814 | - | NZ_CP041091.1 | Nocardioides sambongensis |
| 130 | 388519 | 388713 | + | NZ_CP028130.1 | Rathayibacter iranicus |
| 131 | 980636 | 980830 | - | NZ_CP014209.1 | Isoptericola dokdonensis DS-3 |
| 132 | 3095488 | 3095682 | - | NZ_CP032630.1 | Protaetiibacter intestinalis |
| 133 | 1766342 | 1766536 | - | NZ_CP012117.1 | Dermabacter vaginalis |
| 134 | 1759091 | 1759297 | - | NZ_LT985188.1 | Micropruina glycogenica |
| 135 | 278921 | 279127 | - | NZ_CP040635.1 | Acidipropionibacterium jensenii |
| 136 | 3177329 | 3177526 | + | NZ_LR134352.1 | Nocardia asteroides |
| 137 | 941008 | 941202 | + | NZ_CP013745.1 | Arthrobacter alpinus |
| 138 | 2374974 | 2375168 | - | NZ_CP018762.1 | Microbacterium aurum |
| 139 | 1443368 | 1443562 | + | NZ_CP047180.1 | Rathayibacter festucae |
| 140 | 1824664 | 1824858 | - | NZ_CP012507.1 | Kocuria palustris |
| 141 | 2640172 | 2640366 | - | NZ_CP059164.1 | Nocardioides ungokensis |
| 142 | 2350690 | 2350884 | - | NZ_CP031425.1 | Microbacterium foliorum |
| 143 | 1356337 | 1356531 | + | NZ_CP031422.1 | Microbacterium oxydans |
| 144 | 1837937 | 1838131 | + | NC_015635.1 | Microlunatus phosphovorus NM-1 |
| 145 | 36646 | 36840 | - | NZ_CP061344.1 | Microbacterium hominis |
| 146 | 2505729 | 2505923 | + | NC_013510.1 | Thermomonospora curvata DSM 43183 |
| 147 | 2244081 | 2244275 | - | NZ_CP033724.1 | Clavibacter michiganensis subsp. michiganensis |
| 148 | 1536296 | 1536490 | - | NZ_CP040752.1 | Streptomyces rectiverticillatus |
| 149 | 1430892 | 1431086 | + | NC_013530.1 | Xylanimonas cellulosilytica DSM 15894 |
| 150 | 780133 | 780327 | + | NZ_LR134479.1 | Rothia aeria |
| 151 | 388657 | 388851 | - | NZ_CP049255.1 | Microbacterium endophyticum |
| 152 | 1075606 | 1075800 | + | NZ_CP064760.1 | Microbacterium schleiferi |
| 153 | 16768 | 16962 | - | NZ_CP041146.1 | Nocardioides humi |
| 154 | 1755787 | 1755981 | + | NC_014643.1 | Rothia dentocariosa ATCC 17931 |
| 155 | 2486883 | 2487089 | - | NZ_CP025198.1 | Acidipropionibacterium virtanenii |
| 156 | 2431404 | 2431598 | + | NZ_CP022295.1 | Nocardioides aromaticivorans |
| 157 | 2554941 | 2555135 | + | NZ_CP009896.1 | Pimelobacter simplex |
| 158 | 1922471 | 1922665 | + | NZ_CP029642.1 | Arthrobacter dokdonellae |
| 159 | 3235734 | 3235928 | - | NZ_CP071883.1 | Curtobacterium flaccumfaciens pv. flaccumfaciens |
| 160 | 6650527 | 6650721 | + | NZ_CP048882.1 | Streptomyces bathyalis |
| 161 | 1759969 | 1760163 | - | NZ_CP056080.1 | Rothia nasimurium |
| 162 | 1165396 | 1165590 | + | NZ_CP031423.1 | Microbacterium lemovicicum |
| 163 | 1953623 | 1953817 | - | NZ_CP038256.1 | Microbacterium sediminis |
| 164 | 3375690 | 3375896 | + | NZ_CP019400.1 | Acidipropionibacterium acidipropionici |
| 165 | 205425 | 205619 | + | NC_004572.3 | Tropheryma whipplei str. Twist |
| 166 | 1666788 | 1666982 | - | NZ_CP061538.1 | Rothia amarae |
| 167 | 3280527 | 3280733 | - | NZ_CP065682.1 | Brevibacterium casei |
| 168 | 5904994 | 5905188 | - | NC_009142.1 | Saccharopolyspora erythraea NRRL 2338 |
| 169 | 1349510 | 1349704 | + | NZ_LT906453.1 | Dermatophilus congolensis |
| 170 | 3039253 | 3039447 | - | NZ_CP035491.1 | Agromyces protaetiae |
| 171 | 4253135 | 4253329 | + | NZ_CP015235.1 | Rhodococcus fascians D188 |
| 172 | 979623 | 979817 | + | NZ_CP031421.1 | Microbacterium oleivorans |
| 173 | 2241747 | 2241941 | + | NZ_CP022752.1 | Actinopolyspora erythraea |
| 174 | 3200311 | 3200505 | + | NZ_AP022560.1 | Mycolicibacterium moriokaense |
| 175 | 4580755 | 4580949 | - | NZ_CP016353.1 | Prauserella marina |
| 176 | 585071 | 585265 | - | NZ_CP008802.1 | Actinotignum schaalii |
| 177 | 1916459 | 1916653 | + | NZ_CP013254.1 | Kocuria flava |
| 178 | 2642356 | 2642550 | - | NZ_CP031455.1 | Streptomyces olivoreticuli subsp. olivoreticuli |
| 179 | 3019837 | 3020043 | + | NZ_CP019607.1 | Tessaracoccus flavescens |
| 180 | 1226513 | 1226707 | + | NZ_CP028913.1 | Agromyces badenianii |
| 181 | 7352655 | 7352849 | - | NC_019673.1 | Saccharothrix espanaensis DSM 44229 |
| 182 | 1905566 | 1905760 | - | NZ_AP022601.1 | Mycobacterium gallinarum |
| 183 | 427739 | 427939 | + | NC_018018.1 | Bernardetia litoralis DSM 6794 |
| 184 | 3088605 | 3088799 | + | NZ_AP018920.1 | Pseudonocardia autotrophica |
| 185 | 280855 | 281052 | + | NZ_CP035810.1 | Brevibacterium luteolum |
| 186 | 591630 | 591824 | + | NZ_AP022608.1 | Mycolicibacterium gadium |
| 187 | 5151698 | 5151892 | - | NZ_CP016076.1 | Actinoalloteichus fjordicus |
| 188 | 2797842 | 2798036 | - | NZ_CP013979.1 | Agromyces aureus |
| 189 | 6416924 | 6417118 | - | NZ_CP023445.1 | Actinosynnema pretiosum |
| 190 | 6500906 | 6501100 | - | NC_013093.1 | Actinosynnema mirum DSM 43827 |
| 191 | 2076796 | 2076990 | - | NC_014246.1 | Mobiluncus curtisii ATCC 43063 |
| 192 | 5838390 | 5838584 | + | NZ_CP065253.1 | Streptomyces clavuligerus |
| 193 | 1449439 | 1449633 | - | NZ_CP072827.1 | Streptomyces mobaraensis NBRC 13819 = DSM 40847 |
| 194 | 2924508 | 2924702 | + | NZ_LN849456.1 | Devriesea agamarum |
| 195 | 1517139 | 1517345 | - | NZ_CP060789.1 | Tessaracoccus defluvii |
| 196 | 1246454 | 1246648 | - | NZ_CP060404.1 | Streptomyces buecherae |
| 197 | 9013175 | 9013369 | - | NZ_CP034550.1 | Saccharothrix syringae |
| 198 | 1365928 | 1366122 | - | NZ_CP020700.1 | Streptomyces tsukubensis |
| 199 | 161195 | 161389 | - | NZ_CP047156.1 | Epidermidibacterium keratini |
| 200 | 2048147 | 2048341 | - | NZ_CP049933.1 | Leucobacter coleopterorum |
| 201 | 2189418 | 2189612 | - | NZ_CP023690.1 | Streptomyces spectabilis |
| 202 | 779590 | 779784 | - | NZ_AP017457.1 | Aurantimicrobium minutum |
| 203 | 2084459 | 2084653 | + | NZ_CP024633.1 | Mycobacteroides salmoniphilum |
| 204 | 2384916 | 2385110 | + | NZ_CP014955.1 | Mycobacteroides abscessus |
| 205 | 5062493 | 5062687 | - | NZ_AP022599.1 | Mycolicibacterium pulveris |
| 206 | 2304832 | 2305026 | - | NZ_CP010271.1 | Mycobacteroides saopaulense |
| 207 | 6197244 | 6197438 | + | NZ_CP023202.1 | Streptomyces xinghaiensis S187 |
| 208 | 1724751 | 1724945 | + | NZ_CP045529.1 | Luteimicrobium xylanilyticum |
| 209 | 3335044 | 3335238 | + | NZ_AP022570.1 | Mycolicibacterium poriferae |
| 210 | 1689614 | 1689808 | - | NZ_AP012326.1 | Bifidobacterium dentium JCM 1195 = DSM 20436 |
| 211 | 7125104 | 7125298 | + | NZ_CP026652.1 | Streptomyces dengpaensis |
| 212 | 2323993 | 2324187 | + | NZ_CP007220.1 | Mycobacteroides chelonae CCUG 47445 |
| 213 | 1416395 | 1416589 | - | NZ_CP023695.1 | Streptomyces alboniger |
| 214 | 902387 | 902581 | - | NZ_CP031194.1 | Streptomyces paludis |
| 215 | 7246702 | 7246896 | - | NZ_CP045572.1 | Nonomuraea nitratireducens |
| 216 | 8055065 | 8055259 | + | NC_003155.5 | Streptomyces avermitilis MA-4680 = NBRC 14893 |
| 217 | 1736382 | 1736576 | - | NZ_CP022685.1 | Streptomyces formicae |
| 218 | 3194614 | 3194808 | + | NZ_CP063373.1 | Streptomyces ferrugineus |
| 219 | 8181451 | 8181645 | + | NZ_CP023699.1 | Streptomyces kanamyceticus |
| 220 | 1563685 | 1563879 | - | NZ_CP063374.1 | Streptomyces chromofuscus |
| 221 | 3386000 | 3386194 | - | NC_016582.1 | Streptomyces bingchenggensis BCW-1 |
| 222 | 7402662 | 7402856 | + | NZ_CP045643.1 | Streptomyces fagopyri |
| 223 | 2657873 | 2658067 | - | NZ_CP027433.1 | Gordonia iterans |
| 224 | 5937759 | 5937953 | + | NC_020990.1 | Streptomyces albidoflavus |
| 225 | 6288603 | 6288797 | + | NZ_CP031742.1 | Streptomyces koyangensis |
| 226 | 7679105 | 7679299 | + | NZ_AP023440.1 | Streptomyces glomeroaurantiacus |
| 227 | 7066284 | 7066478 | + | NZ_CP034687.1 | Streptomyces griseoviridis |
| 228 | 1217141 | 1217335 | - | NZ_AP023439.1 | Streptomyces tuirus |
| 229 | 6541173 | 6541367 | + | NZ_CP031264.1 | Streptacidiphilus bronchialis |
| 230 | 2252844 | 2253038 | + | NZ_AP018165.1 | [Mycobacterium] stephanolepidis |
| 231 | 1899959 | 1900153 | - | NZ_CP027306.1 | Streptomyces atratus |
| 232 | 1398064 | 1398258 | - | NZ_CP023703.1 | Streptomyces galilaeus |
| 233 | 756251 | 756445 | - | NZ_CP049863.1 | Leucobacter viscericola |
| 234 | 1114266 | 1114460 | - | NZ_CP070228.1 | Arcanobacterium phocisimile |
| 235 | 1117973 | 1118167 | + | NZ_LS483427.1 | Arcanobacterium haemolyticum |
| 236 | 8673065 | 8673259 | + | NZ_CP065050.1 | Streptomyces solisilvae |
| 237 | 858361 | 858555 | + | NZ_CP028129.1 | Rathayibacter rathayi |
| 238 | 530780 | 530977 | - | NZ_CP034930.1 | Apibacter raozihei |
| 239 | 1389079 | 1389273 | + | NZ_AP022586.1 | Mycolicibacterium litorale |
| 240 | 3939157 | 3939351 | - | NZ_LN831039.1 | Mycolicibacterium smegmatis |
| 241 | 1197960 | 1198154 | - | NC_014655.1 | Leadbetterella byssophila DSM 17132 |
| 242 | 6677202 | 6677396 | - | NC_013595.1 | Streptosporangium roseum DSM 43021 |
| 243 | 3185062 | 3185256 | - | NC_013757.1 | Geodermatophilus obscurus DSM 43160 |
| 244 | 726666 | 726857 | + | NC_015389.1 | Coriobacterium glomerans PW2 |
| 245 | 1107647 | 1107841 | - | NZ_CP020563.1 | Kitasatospora albolonga |
| 246 | 1048391 | 1048585 | - | NZ_CP024957.1 | Streptomyces cavourensis |
| 247 | 1133669 | 1133863 | - | NZ_CP070242.1 | Streptomyces californicus |
| 248 | 5478371 | 5478565 | - | NZ_CP051486.1 | Streptomyces pratensis |
| 249 | 1335818 | 1336012 | - | NZ_CP013738.1 | Streptomyces globisporus C-1027 |
| 250 | 6910442 | 6910636 | + | NC_010572.1 | Streptomyces griseus subsp. griseus NBRC 13350 |
| 251 | 2527872 | 2528066 | - | NZ_CP011853.1 | Gordonia phthalatica |
| 252 | 1272084 | 1272278 | - | NC_021177.1 | Streptomyces fulvissimus DSM 40593 |
| 253 | 1744641 | 1744835 | + | NC_014830.1 | Intrasporangium calvum DSM 43043 |
| 254 | 1580475 | 1580675 | - | NZ_CP058670.1 | Chryseoglobus indicus |
| 255 | 1006041 | 1006238 | - | NC_017025.1 | Flavobacterium indicum GPTSA100-9 = DSM 17447 |
| 256 | 4550177 | 4550371 | - | NZ_CP022521.1 | Actinoalloteichus hoggarensis |
| 257 | 1189137 | 1189331 | - | NZ_CP042266.1 | Streptomyces qinzhouensis |
| 258 | 2831063 | 2831260 | - | NZ_CP022121.1 | Dehalobacterium formicoaceticum |
| 259 | 588735 | 588932 | + | NZ_CP017774.1 | Flavobacterium commune |
| 260 | 29671 | 29868 | + | NZ_CP029255.1 | Flavobacterium crocinum |
| 261 | 618930 | 619124 | + | NZ_CP035495.1 | Xylanimonas allomyrinae |
| 262 | 74509 | 74703 | - | NC_018178.1 | Melioribacter roseus P3M-2 |
| 263 | 1789718 | 1789924 | - | NZ_LT906441.1 | Cutibacterium granulosum |
| 264 | 3431004 | 3431204 | - | NZ_CP006837.1 | Lysinibacillus varians |
| 265 | 1310439 | 1310639 | + | NZ_CP019980.1 | Lysinibacillus sphaericus |
| 266 | 1783866 | 1784063 | - | NZ_CP038810.1 | Flavobacterium sangjuense |
| 267 | 1319509 | 1319709 | + | NZ_CP010820.1 | Lysinibacillus fusiformis |
| 268 | 3633807 | 3634004 | - | NZ_CP037933.1 | Flavobacterium nackdongense |
| 269 | 4056735 | 4056932 | + | NZ_CP020919.1 | Flavobacterium kingsejongi |
| 270 | 32999 | 33196 | + | NC_009441.1 | Flavobacterium johnsoniae UW101 |
| 271 | 1354185 | 1354382 | - | NZ_CP017688.1 | Flavobacterium crassostreae |
| 272 | 2505571 | 2505768 | - | NZ_CP020918.1 | Flavobacterium faecale |
| 273 | 5891990 | 5892184 | - | NC_013729.1 | Kribbella flavida DSM 17836 |
| 274 | 1591668 | 1591865 | - | NC_006138.1 | Desulfotalea psychrophila LSv54 |
| 275 | 5620004 | 5620198 | + | NC_016111.1 | Streptomyces cattleya NRRL 8057 = DSM 46488 |
| 276 | 1348603 | 1348797 | - | NZ_CP017812.1 | Boudabousia tangfeifanii |
| 277 | 4494346 | 4494543 | - | NC_022600.1 | Gloeobacter kilaueensis JS1 |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_012669.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00588.21 | 0.91 | 252 | 570.0 | same-strand | SpoU rRNA Methylase family |
| 2 | PF08032.14 | 0.8 | 222 | 576.0 | same-strand | RNA 2'-O ribose methyltransferase substrate binding |
| 3 | PF00453.20 | 1.0 | 277 | 81 | same-strand | Ribosomal protein L20 |
| 4 | PF00707.24 | 0.99 | 274 | 103.0 | same-strand | Translation initiation factor IF-3, C-terminal domain |
| 5 | PF05198.18 | 0.62 | 173 | 106 | same-strand | Translation initiation factor IF-3, N-terminal domain |
| 6 | PF08899.13 | 0.69 | 192 | 1133.0 | opposite-strand | Domain of unknown function (DUF1844) |
| 7 | PF07179.14 | 0.63 | 175 | 1590 | same-strand | SseB protein N-terminal domain |
++ More..