ProsmORF-pred
Result : C4LID0
Protein Information
Information Type Description
Protein name 50S ribosomal protein L35
NCBI Accession ID CP001620.1
Organism Corynebacterium kroppenstedtii (strain DSM 44385 / JCM 11950 / CIP 105744 / CCUG 35717)
Left 985715
Right 985909
Strand +
Nucleotide Sequence GTGAAGCAGAAGACCCACAGCGGAATTAAGAAGCGCATCAAGAAGACGGGCTCCGGCAAACTCCGCCGCGAGCAGGCTAATCGCCGTCACCTTCTCGAGGGCAAGCCATCGACCCGCACCCGTCGTTTGAAGGGCGATACTTCCGTTTCCCGTAACGACACCAAGCGCGTTAATCGGCTCCTGGGCGAGGGCTAG
Sequence MKQKTHSGIKKRIKKTGSGKLRREQANRRHLLEGKPSTRTRRLKGDTSVSRNDTKRVNRLLGEG
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl00392. Profile Description: Ribosomal protein L35. This ribosomal protein is found in bacteria and organelles only. It is not closely related to any eukaryotic or archaeal ribosomal protein. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Pubmed ID 18430482
Domain CDD:412354
Functional Category Ribosomal_protein
Uniprot ID C4LID0
ORF Length (Amino Acid) 64
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 490
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 985715 985909 + NC_012704.1 Corynebacterium kroppenstedtii DSM 44385
2 1066296 1066490 + NZ_CP033897.1 Corynebacterium gerontici
3 1180812 1181006 + NC_021663.1 Corynebacterium terpenotabidum Y-11
4 1526749 1526943 - NZ_CP009248.1 Corynebacterium sphenisci DSM 44792
5 737208 737402 - NZ_CP068168.1 Corynebacterium amycolatum
6 791077 791271 - NZ_CP042429.1 Corynebacterium nuruki S6-4
7 1323217 1323411 - NZ_CP033898.1 Corynebacterium pseudopelargi
8 1322824 1323018 - NZ_CP035299.1 Corynebacterium pelargi
9 1338179 1338373 + NZ_CP033896.1 Corynebacterium choanae
10 1001648 1001842 + NZ_CP011312.1 Corynebacterium kutscheri
11 1345421 1345615 + NZ_CP009245.1 Corynebacterium aquilae DSM 44791
12 1366525 1366719 + NC_021915.1 Corynebacterium maris DSM 45190
13 428078 428272 + NZ_CP032788.1 Corynebacterium xerosis
14 1012188 1012382 + NC_017301.2 Corynebacterium pseudotuberculosis C231
15 118193 118387 + NZ_LT906443.1 Corynebacterium ulcerans
16 858941 859135 + NC_022198.1 Corynebacterium argentoratense DSM 44202
17 1512328 1512522 - NC_012590.1 Corynebacterium aurimucosum ATCC 700975
18 1411691 1411885 + NZ_CP004353.1 Corynebacterium vitaeruminis DSM 20294
19 938682 938876 + NZ_CP046883.1 Corynebacterium anserum
20 1240062 1240256 + NZ_LS483460.1 Corynebacterium minutissimum
21 1563063 1563257 - NZ_CP010827.1 Corynebacterium singulare
22 1602104 1602298 - NZ_CP006841.1 Corynebacterium lactis RW2-5
23 1118335 1118529 + NZ_LR738855.1 Corynebacterium rouxii
24 1134238 1134432 + NZ_LN831026.1 Corynebacterium diphtheriae
25 1916614 1916808 + NZ_LS483464.1 Corynebacterium renale
26 1256634 1256828 - NZ_CP008944.1 Corynebacterium atypicum
27 2368537 2368731 + NZ_CP068161.1 Corynebacterium propinquum
28 1140301 1140495 + NC_015673.1 Corynebacterium resistens DSM 45100
29 1613225 1613419 + NZ_CP011542.1 Corynebacterium mustelae
30 1191991 1192185 + NZ_CP011541.1 Corynebacterium epidermidicanis
31 1992162 1992356 - NZ_CP006842.1 Corynebacterium glyciniphilum AJ 3170
32 1183286 1183480 + NZ_CP039247.1 Corynebacterium endometrii
33 641677 641871 - NZ_LT906481.1 Corynebacterium urealyticum
34 1578314 1578508 + NC_004369.1 Corynebacterium efficiens YS-314
35 1687095 1687289 - NZ_LS483459.1 Corynebacterium jeikeium
36 1419628 1419822 - NZ_CP009247.1 Corynebacterium frankenforstense DSM 45800
37 1478859 1479053 + NC_020302.1 Corynebacterium halotolerans YIM 70093 = DSM 44683
38 1583721 1583915 + NZ_AP017369.1 Corynebacterium suranareeae
39 1239328 1239522 + NZ_CP011545.1 Corynebacterium testudinoris
40 1534682 1534876 - NZ_CP009251.1 Corynebacterium stationis
41 141417 141611 + NZ_CP014635.1 Corynebacterium simulans
42 1370284 1370478 + NC_020506.1 Corynebacterium callunae DSM 20147
43 1461076 1461270 - NZ_CP009249.1 Corynebacterium phocae
44 1380334 1380528 + NZ_CP009220.1 Corynebacterium deserti GIMN1.010
45 1403163 1403357 + NZ_CP015622.1 Corynebacterium crudilactis
46 1187061 1187255 + NZ_CP007790.1 Corynebacterium marinum DSM 44953
47 1493771 1493965 - NZ_CP067012.1 Corynebacterium kefirresidentii
48 1598169 1598363 - NZ_LR698967.1 Corynebacterium ammoniagenes
49 1239876 1240070 + NZ_CP009246.1 Corynebacterium flavescens
50 6197673 6197867 + NC_022663.1 Mycobacterium kansasii ATCC 12478
51 1196023 1196217 + NZ_AP022582.1 Mycobacterium seoulense
52 478156 478350 + NZ_AP022619.1 Mycobacterium paraseoulense
53 4234306 4234500 - NZ_AP022606.1 Mycobacterium branderi
54 968428 968622 - NZ_CP069485.1 Corynebacterium glucuronolyticum
55 2062646 2062840 + NZ_CP011883.2 Mycobacterium haemophilum DSM 44634
56 890985 891179 - NZ_CP018135.1 Neomicrococcus aestuarii
57 2565665 2565859 + NZ_LR130759.1 Mycobacterium basiliense
58 1633058 1633252 + NZ_CP029543.1 Mycobacterium leprae
59 2889651 2889845 - NZ_CP009360.4 Mycobacterium avium subsp. hominissuis
60 918667 918861 + NZ_AP022590.1 Mycobacterium mantenii
61 1900033 1900227 + NZ_LT906469.1 Mycolicibacter terrae
62 3894667 3894861 - NZ_AP022574.1 Mycolicibacterium psychrotolerans
63 1057089 1057283 + NZ_CP011546.1 Corynebacterium uterequi
64 2022222 2022389 - NZ_CP045737.1 Aeromicrobium yanjiei
65 2087799 2087966 - NZ_CP026952.1 Aeromicrobium chenweiae
66 1852928 1853122 + NC_000962.3 Mycobacterium tuberculosis H37Rv
67 1879657 1879851 + NC_015848.1 Mycobacterium canettii CIPT 140010059
68 4100746 4100940 + NZ_AP022583.1 Mycobacterium noviomagense
69 624356 624541 + NC_010168.1 Renibacterium salmoninarum ATCC 33209
70 4824805 4824999 - NZ_AP022615.1 Mycobacterium heidelbergense
71 2532794 2532988 + NZ_AP022613.1 Mycobacterium conspicuum
72 1742616 1742810 - NZ_AP022620.1 Mycolicibacterium anyangense
73 51152 51346 - NZ_AP022562.1 Mycobacterium novum
74 1975860 1976054 + NC_015576.1 Mycolicibacter sinensis
75 1804958 1805152 + NZ_LR026975.1 Mycolicibacterium hassiacum DSM 44199
76 2930758 2930952 - NZ_CP023147.1 Mycobacterium marseillense
77 1611700 1611894 + NZ_AP022581.1 Mycobacterium lacus
78 2227618 2227812 + NZ_LT906483.1 Mycolicibacterium thermoresistibile
79 941017 941202 + NZ_CP013745.1 Arthrobacter alpinus
80 3011433 3011627 + NZ_CP020809.1 Mycobacterium dioxanotrophicus
81 2460700 2460894 + NZ_AP018164.1 Mycobacterium shigaense
82 1038375 1038569 - NZ_AP022587.1 Mycobacterium stomatepiae
83 1738549 1738743 - NZ_AP022575.1 Mycobacterium shinjukuense
84 3948369 3948563 - NZ_CP059694.1 Gordonia rubripertincta
85 3177329 3177526 + NZ_LR134352.1 Nocardia asteroides
86 417888 418073 + NZ_CP011005.1 Psychromicrobium lacuslunae
87 3335044 3335238 + NZ_AP022570.1 Mycolicibacterium poriferae
88 1350536 1350730 + NZ_CP006764.1 Corynebacterium doosanense CAU 212 = DSM 45436
89 1815594 1815785 + NZ_CP009312.1 Lawsonella clevelandensis
90 3136950 3137144 - NC_016946.1 Mycobacterium intracellulare ATCC 13950
91 3212902 3213096 - NC_016948.1 Mycobacterium paraintracellulare
92 2465943 2466137 - NC_013172.1 Brachybacterium faecium DSM 4810
93 44704 44898 - NZ_AP022568.1 Mycobacterium simiae
94 1082956 1083141 + NZ_LR131272.1 Arthrobacter agilis
95 2760354 2760548 - NZ_AP024310.1 Mycobacterium heckeshornense
96 1325688 1325882 - NZ_CP026947.1 Corynebacterium yudongzhengii
97 2323993 2324187 + NZ_CP007220.1 Mycobacteroides chelonae CCUG 47445
98 2513550 2513744 + NZ_CP011530.1 Mycobacteroides immunogenum
99 1279362 1279556 + NZ_CP023564.1 Brachybacterium ginsengisoli
100 5062493 5062687 - NZ_AP022599.1 Mycolicibacterium pulveris
101 1594170 1594355 + NZ_CP015961.1 Dietzia timorensis
102 2202190 2202387 + NZ_CP018082.1 Nocardia mangyaensis
103 6030718 6030912 - NZ_CP041695.1 Nocardia otitidiscaviarum
104 2181008 2181193 + NZ_CP041695.1 Nocardia otitidiscaviarum
105 1389079 1389273 + NZ_AP022586.1 Mycolicibacterium litorale
106 3799414 3799608 - NZ_CP027114.1 Gordonia alkanivorans
107 2084459 2084653 + NZ_CP024633.1 Mycobacteroides salmoniphilum
108 1770532 1770726 + NZ_CP023563.1 Brachybacterium vulturis
109 699356 699550 + NZ_AP022569.1 Mycobacterium cookii
110 3672396 3672590 + NZ_AP022595.1 Mycolicibacterium sarraceniae
111 1845152 1845346 - NZ_CP031356.1 Brachybacterium saurashtrense
112 1592040 1592234 - NZ_AP022563.1 Mycolicibacterium duvalii
113 964272 964466 - NZ_AP022576.1 Mycobacterium florentinum
114 740093 740287 - NZ_CP022316.1 Brachybacterium avium
115 446929 447123 + NZ_AP022573.1 Mycobacterium saskatchewanense
116 2766354 2766521 - NC_013159.1 Saccharomonospora viridis DSM 43017
117 2178386 2178580 - NZ_AP022605.1 Mycobacterium doricum
118 1650549 1650743 + NZ_AP022617.1 Mycolicibacterium monacense
119 2252844 2253038 + NZ_AP018165.1 [Mycobacterium] stephanolepidis
120 5904994 5905188 - NC_009142.1 Saccharopolyspora erythraea NRRL 2338
121 1168566 1168760 + NZ_CP011311.1 Corynebacterium camporealensis
122 2971968 2972162 - NC_016906.1 Gordonia polyisoprenivorans VH2
123 4488828 4489022 + NZ_CP012150.1 Mycobacterium goodii
124 1360587 1360781 + NZ_AP022609.1 Mycolicibacter hiberniae
125 3027427 3027621 + NZ_CP025546.1 Mycobacterium paragordonae
126 3540324 3540518 - NC_008726.1 Mycolicibacterium vanbaalenii PYR-1
127 1805933 1806127 + NC_014151.1 Cellulomonas flavigena DSM 20109
128 5877771 5877965 - NZ_AP022596.1 Mycolicibacterium helvum
129 2304832 2305026 - NZ_CP010271.1 Mycobacteroides saopaulense
130 8892357 8892551 + NZ_CP031142.1 Saccharopolyspora pogona
131 1793057 1793224 + NZ_CP011502.1 Aeromicrobium erythreum
132 3629784 3629978 + NZ_CP018863.1 Arthrobacter crystallopoietes
133 5869539 5869733 + NZ_CP061007.1 Saccharopolyspora spinosa
134 1922480 1922665 + NZ_CP029642.1 Arthrobacter dokdonellae
135 2384916 2385110 + NZ_CP014955.1 Mycobacteroides abscessus
136 4098634 4098828 + NZ_AP022579.1 Mycolicibacterium boenickei
137 2996354 2996539 + NZ_AP017900.1 Nocardia seriolae
138 1819707 1819901 - NZ_AP022614.1 Mycobacterium parmense
139 3233324 3233518 - NZ_AP022561.1 Mycolicibacterium aichiense
140 1800428 1800622 + NC_015514.1 Cellulomonas fimi ATCC 484
141 1582796 1582981 + NZ_CP015449.1 Dietzia lutea
142 1577529 1577714 + NZ_CP015453.1 Dietzia psychralcaliphila
143 2366871 2367056 - NC_014165.1 Thermobispora bispora DSM 43833
144 3624462 3624656 + NZ_AP022572.1 Mycobacterium shottsii
145 2693547 2693741 + NZ_AP018410.1 Mycobacterium pseudoshottsii JCM 15466
146 4295675 4295869 + NZ_CP058277.1 Mycobacterium marinum
147 2267928 2268122 - NZ_CP033325.1 Georgenia faecalis
148 3939157 3939351 - NZ_LN831039.1 Mycolicibacterium smegmatis
149 276317 276511 + NZ_LS483468.1 Rhodococcus coprophilus
150 2082061 2082255 + NZ_AP022612.1 Mycolicibacterium confluentis
151 3135918 3136112 - NZ_CP045929.1 Saccharopolyspora coralli
152 3079414 3079608 - NZ_AP022618.1 Mycolicibacterium insubricum
153 3703913 3704107 + NZ_AP022589.1 Mycolicibacter minnesotensis
154 3586022 3586216 - NZ_CP011269.1 Mycolicibacterium fortuitum
155 2882100 2882294 + NZ_CP011491.1 Mycolicibacterium vaccae 95051
156 1082806 1083000 + NZ_CP026948.1 Corynebacterium liangguodongii
157 1746734 1746919 + NZ_CP068013.1 Paenarthrobacter ureafaciens
158 741348 741533 + NZ_AP022870.1 Phytohabitans flavus
159 3200311 3200505 + NZ_AP022560.1 Mycolicibacterium moriokaense
160 3987755 3987949 + NZ_AP022598.1 Mycolicibacterium parafortuitum
161 2141793 2141987 - NC_015671.1 Cellulomonas gilvus ATCC 13127
162 3822834 3823028 + NC_009664.2 Kineococcus radiotolerans SRS30216 = ATCC BAA-149
163 1560167 1560361 + NC_015564.1 Hoyosella subflava DQS3-9A1
164 1599821 1600006 - NC_012803.1 Micrococcus luteus NCTC 2665
165 3425193 3425360 - NZ_AP023355.1 Actinocatenispora thailandica
166 823136 823330 - NZ_LR134350.1 Actinomyces howellii
167 2007770 2007964 - NZ_CP038157.1 Corynebacterium sanguinis
168 6888204 6888389 + NZ_AP022871.1 Phytohabitans suffuscus
169 507637 507831 - NZ_CP009922.3 Streptomyces xiamenensis
170 735954 736148 - NZ_CP054938.1 Streptomyces harbinensis
171 5221717 5221902 - NZ_AP023396.1 Nocardia wallacei
172 3457339 3457533 - NZ_AP022610.1 Mycolicibacterium madagascariense
173 388657 388851 - NZ_CP049255.1 Microbacterium endophyticum
174 2092951 2093136 + NC_006361.1 Nocardia farcinica IFM 10152
175 2048489 2048683 - NZ_CP039292.1 Actinomyces procaprae
176 36646 36840 - NZ_CP061344.1 Microbacterium hominis
177 4002413 4002607 + NZ_CP043474.1 Mycobacterium grossiae
178 1448176 1448370 + NC_015588.1 Isoptericola variabilis 225
179 2374974 2375168 - NZ_CP018762.1 Microbacterium aurum
180 3044881 3045075 - NC_013441.1 Gordonia bronchialis DSM 43247
181 1294957 1295151 + NZ_CP044232.1 Microbacterium lushaniae
182 1338616 1338810 + NZ_CP038266.1 Microbacterium wangchenii
183 1247151 1247345 + NC_014550.1 Glutamicibacter arilaitensis Re117
184 7148190 7148384 - NZ_AP022567.1 Mycolicibacterium mageritense
185 5722138 5722323 - NZ_CP016174.1 Amycolatopsis orientalis
186 585071 585256 - NZ_CP008802.1 Actinotignum schaalii
187 3039253 3039447 - NZ_CP035491.1 Agromyces protaetiae
188 5642374 5642559 - NC_021252.1 Amycolatopsis keratiniphila
189 2936348 2936533 + NZ_CP008953.1 Amycolatopsis japonica
190 1177473 1177667 + NZ_CP033081.1 Glutamicibacter nicotianae
191 1905566 1905760 - NZ_AP022601.1 Mycobacterium gallinarum
192 1021698 1021892 + NZ_CP034412.1 Glutamicibacter creatinolyticus
193 591630 591824 + NZ_AP022608.1 Mycolicibacterium gadium
194 1309094 1309288 + NZ_LT906467.1 Corynebacterium imitans
195 6416924 6417118 - NZ_CP023445.1 Actinosynnema pretiosum
196 6500906 6501100 - NC_013093.1 Actinosynnema mirum DSM 43827
197 4253135 4253329 + NZ_CP015235.1 Rhodococcus fascians D188
198 1824664 1824849 - NZ_CP012507.1 Kocuria palustris
199 3702289 3702483 + NZ_CP042260.1 Glutamicibacter halophytocola
200 372414 372608 + NZ_AP022616.1 Mycolicibacterium phocaicum
201 979084 979278 - NZ_AP022577.1 Mycolicibacterium aubagnense
202 3431820 3432014 - NZ_CP062008.1 Mycolicibacterium mucogenicum DSM 44124
203 9013175 9013369 - NZ_CP034550.1 Saccharothrix syringae
204 2077498 2077692 - NZ_CP051884.1 Cellulomonas taurus
205 7352655 7352849 - NC_019673.1 Saccharothrix espanaensis DSM 44229
206 2236315 2236509 - NZ_CP039291.1 Cellulomonas shaoxiangyii
207 2016632 2016817 + NZ_LR134476.1 Trueperella bialowiezensis
208 4580755 4580922 - NZ_CP016353.1 Prauserella marina
209 4262161 4262352 - NZ_CP022753.1 Nocardiopsis gilva YIM 90087
210 559653 559838 - NZ_CP007519.1 Trueperella pyogenes
211 5438297 5438482 - NZ_CP026746.1 Nocardia cyriacigeorgica
212 6653654 6653821 - NC_017093.1 Actinoplanes missouriensis 431
213 1108006 1108200 - NZ_AP022603.1 Mycolicibacterium fallax
214 769161 769355 - NZ_AP022593.1 Mycolicibacterium arabiense
215 1807731 1807925 - NC_014168.1 Segniliparus rotundus DSM 44985
216 496278 496472 + NZ_AP022565.1 Mycolicibacterium alvei
217 434268 434462 + NZ_CP033972.1 Gordonia insulae
218 1103583 1103777 + NZ_CP009215.1 Corynebacterium ureicelerivorans
219 2505729 2505923 + NC_013510.1 Thermomonospora curvata DSM 43183
220 751693 751878 - NZ_CP034438.1 Flaviflexus salsibiostraticola
221 347939 348133 - NZ_CP066049.1 Actinomyces naeslundii
222 1161594 1161788 - NZ_LR134477.1 Actinomyces viscosus
223 907228 907422 + NZ_CP066060.1 Actinomyces oris
224 3219467 3219634 + NC_013947.1 Stackebrandtia nassauensis DSM 44728
225 2415878 2416072 + NZ_CP049253.1 Microbacterium amylolyticum
226 6628750 6628917 - NC_022657.1 Actinoplanes friuliensis DSM 7358
227 1430892 1431086 + NC_013530.1 Xylanimonas cellulosilytica DSM 15894
228 962513 962707 - NZ_CP066065.1 Schaalia meyeri
229 4123777 4123971 + NZ_AP022588.1 Mycolicibacterium sediminis
230 6905142 6905336 + NZ_CP011340.1 Streptomyces pristinaespiralis
231 1486631 1486825 - NZ_CP053642.1 Actinomyces marmotae
232 9084605 9084799 - NZ_CP012752.1 Kibdelosporangium phytohabitans
233 723190 723384 + NZ_LR134357.1 Actinomyces israelii
234 1174928 1175122 + NZ_LS483423.1 Jonesia denitrificans
235 1075606 1075800 + NZ_CP064760.1 Microbacterium schleiferi
236 1681550 1681744 + NZ_CP048813.1 Rhodococcus triatomae
237 2924508 2924702 + NZ_LN849456.1 Devriesea agamarum
238 780133 780327 + NZ_LR134479.1 Rothia aeria
239 3364156 3364350 - NZ_LR134356.1 Mycolicibacterium aurum
240 3117042 3117236 - NZ_CP015163.1 Amycolatopsis albispora
241 865286 865480 + NZ_CP020468.1 Actinomyces gaoshouyii
242 3616573 3616758 - NZ_CP022088.2 Nocardia brasiliensis
243 2350690 2350884 - NZ_CP031425.1 Microbacterium foliorum
244 1356337 1356531 + NZ_CP031422.1 Microbacterium oxydans
245 1208953 1209147 + NZ_CP019688.1 Corynebacterium glaucum
246 1755787 1755981 + NC_014643.1 Rothia dentocariosa ATCC 17931
247 2175715 2175909 + NZ_LR134355.1 Mycolicibacterium chitae
248 618930 619124 + NZ_CP035495.1 Xylanimonas allomyrinae
249 4107932 4108126 - NC_015312.1 Pseudonocardia dioxanivorans CB1190
250 1036639 1036833 + NZ_CP066802.1 Actinomyces weissii
251 2076796 2076990 - NC_014246.1 Mobiluncus curtisii ATCC 43063
252 1415948 1416142 - NC_008578.1 Acidothermus cellulolyticus 11B
253 7271022 7271216 - NZ_CP007155.1 Kutzneria albida DSM 43870
254 2241747 2241941 + NZ_CP022752.1 Actinopolyspora erythraea
255 3530107 3530301 + NZ_CP038436.1 Nocardioides seonyuensis
256 2611168 2611362 - NZ_LR134363.1 Actinomyces slackii
257 5151698 5151892 - NZ_CP016076.1 Actinoalloteichus fjordicus
258 2511568 2511735 + NC_014391.1 Micromonospora aurantiaca ATCC 27029
259 5653021 5653215 - NC_008278.1 Frankia alni ACN14a
260 597797 597991 - NZ_CP038267.1 Nocardioides euryhalodurans
261 5355553 5355747 - NZ_AP022600.1 Mycolicibacterium tokaiense
262 2366052 2366246 + NZ_CP041694.1 Cellulosimicrobium cellulans
263 4944924 4945091 - NZ_CP058322.1 Micromonospora carbonacea
264 1737955 1738149 - NZ_CP025227.1 Actinomyces wuliandei
265 6052076 6052243 - NZ_CP023865.1 Actinoplanes teichomyceticus ATCC 31121
266 1759969 1760163 - NZ_CP056080.1 Rothia nasimurium
267 1953623 1953817 - NZ_CP038256.1 Microbacterium sediminis
268 1837946 1838131 + NC_015635.1 Microlunatus phosphovorus NM-1
269 979623 979817 + NZ_CP031421.1 Microbacterium oleivorans
270 6719537 6719722 - NC_022116.1 Amycolatopsis mediterranei RB
271 2287364 2287552 + NC_020520.1 Ilumatobacter coccineus YM16-304
272 3384987 3385172 - NZ_AP023172.1 Rhodococcus qingshengii
273 1666788 1666982 - NZ_CP061538.1 Rothia amarae
274 1751870 1752064 - NZ_CP059991.1 Streptomyces gardneri
275 1895795 1895983 - NZ_CP035504.1 Kocuria indica
276 2093088 2093282 - NZ_CP044231.1 Microbacterium caowuchunii
277 5733767 5733991 - NZ_CP053564.1 Pseudonocardia broussonetiae
278 1160697 1160864 + NZ_CP045309.1 Micromonospora terminaliae
279 6322672 6322866 - NC_013131.1 Catenulispora acidiphila DSM 44928
280 2192478 2192672 + NZ_CP014228.1 Actinomyces radicidentis
281 2497215 2497409 - NC_013521.1 Sanguibacter keddieii DSM 10542
282 2640172 2640366 - NZ_CP059164.1 Nocardioides ungokensis
283 6026852 6027046 + NZ_CP034279.1 Streptomyces ficellus
284 1703837 1704031 - NZ_CP010407.1 Streptomyces vietnamensis
285 1312855 1313049 - NZ_CP029196.1 Streptomyces venezuelae
286 1597413 1597607 - NZ_CP023693.1 Streptomyces cinereoruber
287 707561 707755 - NZ_LT635457.1 Actinomyces pacaensis
288 388528 388713 + NZ_CP028130.1 Rathayibacter iranicus
289 1114266 1114451 - NZ_CP070228.1 Arcanobacterium phocisimile
290 1117982 1118167 + NZ_LS483427.1 Arcanobacterium haemolyticum
291 993237 993431 - NZ_CP017316.1 Streptomyces rubrolavendulae
292 1018298 1018492 - NZ_CP023696.1 Streptomyces fradiae ATCC 10745 = DSM 40063
293 537898 538095 - NZ_LR214441.1 Tessaracoccus lapidicaptus
294 1765137 1765331 - NZ_CP061539.1 Rothia terrae
295 1286620 1286814 - NZ_CP041091.1 Nocardioides sambongensis
296 1087963 1088157 + NZ_CP026949.1 Mycetocola zhujimingii
297 2387027 2387221 - NZ_CP071139.1 Streptomyces nojiriensis
298 2431404 2431598 + NZ_CP022295.1 Nocardioides aromaticivorans
299 2554941 2555135 + NZ_CP009896.1 Pimelobacter simplex
300 16768 16962 - NZ_CP041146.1 Nocardioides humi
301 563035 563229 - NZ_CP035806.1 Leucobacter triazinivorans
302 1158071 1158265 + NZ_CP035037.1 Leucobacter muris
303 1517139 1517336 - NZ_CP060789.1 Tessaracoccus defluvii
304 5891990 5892157 - NC_013729.1 Kribbella flavida DSM 17836
305 2048147 2048341 - NZ_CP049933.1 Leucobacter coleopterorum
306 1759091 1759288 - NZ_LT985188.1 Micropruina glycogenica
307 2777394 2777588 - NZ_CP029146.1 Rhodococcus ruber
308 2864109 2864303 - NZ_CP027793.1 Rhodococcus hoagii
309 1687572 1687766 - NC_016109.1 Kitasatospora setae KM-6054
310 1165396 1165590 + NZ_CP031423.1 Microbacterium lemovicicum
311 1858552 1858737 - NZ_CP043661.1 Kribbella qitaiheensis
312 1766342 1766536 - NZ_CP012117.1 Dermabacter vaginalis
313 1443377 1443562 + NZ_CP047180.1 Rathayibacter festucae
314 357405 357599 - NZ_CP029254.1 Streptomyces spongiicola
315 2675909 2676103 + NZ_AP019307.1 Nocardioides baekrokdamisoli
316 1249730 1249924 - NZ_LT906473.1 Corynebacterium cystitidis
317 6650527 6650721 + NZ_CP048882.1 Streptomyces bathyalis
318 5906207 5906401 + NZ_CP023692.1 Streptomyces vinaceus
319 4067654 4067848 + NZ_CP060713.1 Nocardioides mesophilus
320 465211 465405 - NZ_CP029188.1 Streptomyces tirandamycinicus
321 3770120 3770314 - NC_007777.1 Frankia casuarinae
322 1916468 1916653 + NZ_CP013254.1 Kocuria flava
323 1206084 1206269 + NZ_CP047186.1 Rathayibacter tanaceti
324 1166270 1166455 + NZ_CP015515.1 Rathayibacter tritici
325 2050548 2050742 - NC_022438.1 Leifsonia xyli subsp. cynodontis DSM 46306
326 4840555 4840749 - NZ_CP030862.1 Streptomyces globosus
327 2527872 2528066 - NZ_CP011853.1 Gordonia phthalatica
328 561504 561704 - NZ_LR215050.1 Acholeplasma hippikon
329 3313847 3314041 - NZ_CP022208.1 Rhodococcus pyridinivorans
330 2657873 2658067 - NZ_CP027433.1 Gordonia iterans
331 3001907 3002101 - NZ_LT906450.1 Rhodococcus rhodochrous
332 1778925 1779119 - NZ_CP019457.1 Streptomyces lydicus
333 6197244 6197438 + NZ_CP023202.1 Streptomyces xinghaiensis S187
334 1189137 1189331 - NZ_CP042266.1 Streptomyces qinzhouensis
335 1805908 1806102 - NZ_CP023691.1 Streptomyces platensis
336 2578546 2578740 - NZ_CP070326.1 Streptomyces noursei
337 34062 34256 + NZ_CP060716.1 Leucobacter denitrificans
338 875382 875582 - NC_010163.1 Acholeplasma laidlawii PG-8A
339 5838390 5838584 + NZ_CP065253.1 Streptomyces clavuligerus
340 6008794 6008988 + NZ_CP023698.1 Streptomyces viridifaciens
341 1365928 1366122 - NZ_CP020700.1 Streptomyces tsukubensis
342 1226513 1226707 + NZ_CP028913.1 Agromyces badenianii
343 1399239 1399433 - NZ_CP072931.1 Streptomyces auratus AGR0001
344 2513905 2514099 - NC_014158.1 Tsukamurella paurometabola DSM 20162
345 3386000 3386194 - NC_016582.1 Streptomyces bingchenggensis BCW-1
346 2542296 2542481 - NZ_LR134442.1 Propionibacterium australiense
347 2088714 2088899 + NC_014666.1 Frankia inefficax
348 2289801 2289995 - NZ_CP020569.1 Streptomyces gilvosporeus
349 7644294 7644488 + NZ_CP023688.1 Streptomyces rimosus
350 2150358 2150525 + NC_009380.1 Salinispora tropica CNB-440
351 952618 952818 + NC_022549.1 Acholeplasma brassicae
352 6541173 6541367 + NZ_CP031264.1 Streptacidiphilus bronchialis
353 1724751 1724945 + NZ_CP045529.1 Luteimicrobium xylanilyticum
354 6422870 6423064 + NZ_CP022310.1 Streptomyces calvus
355 1500232 1500426 - NZ_CP023407.1 Streptomyces fungicidicus
356 980636 980830 - NZ_CP014209.1 Isoptericola dokdonensis DS-3
357 2306227 2306421 - NZ_CP034463.1 Streptomyces aquilus
358 5973851 5974045 + NZ_CP023701.1 Streptomyces subrutilus
359 161195 161389 - NZ_CP047156.1 Epidermidibacterium keratini
360 2797842 2798036 - NZ_CP013979.1 Agromyces aureus
361 1836621 1836815 - NZ_CP015098.1 Streptomyces qaidamensis
362 3235734 3235928 - NZ_CP071883.1 Curtobacterium flaccumfaciens pv. flaccumfaciens
363 1704552 1704746 - NZ_CP012382.1 Streptomyces ambofaciens ATCC 23877
364 7766568 7766762 + NZ_CP017248.1 Streptomyces fodineus
365 1115132 1115326 - NZ_CP021080.1 Streptomyces pluripotens
366 6747600 6747794 + NZ_CP051006.1 Streptomyces griseofuscus
367 2001600 2001794 - NZ_CP071839.1 Streptomyces cyanogenus
368 2309290 2309484 - NZ_CP047020.1 Streptomyces broussonetiae
369 8000124 8000318 - NZ_CP016279.1 Streptomyces griseochromogenes
370 7947348 7947542 + NZ_CP023689.1 Streptomyces chartreusis
371 1589993 1590187 - NZ_CP045096.1 Streptomyces phaeolivaceus
372 7955081 7955275 + NZ_CP022744.1 Streptomyces lincolnensis
373 2691172 2691366 - NZ_CP019066.1 Tsukamurella tyrosinosolvens
374 2019476 2019670 - NZ_CP034539.1 Streptomyces cyaneochromogenes
375 1714524 1714718 - NZ_CP010849.1 Streptomyces cyaneogriseus subsp. noncyanogenus
376 6456977 6457171 + NZ_LN831790.1 Streptomyces leeuwenhoekii
377 7715634 7715828 + NZ_CP032427.1 Streptomyces griseorubiginosus
378 280894 281052 + NZ_CP035810.1 Brevibacterium luteolum
379 8673065 8673259 + NZ_CP065050.1 Streptomyces solisilvae
380 2809944 2810129 - NZ_CP017146.1 Marisediminicola antarctica
381 427783 427968 - NZ_CP061725.1 Micromonospora craniellae
382 1332604 1332798 - NZ_CP015866.1 Streptomyces parvulus
383 476687 476872 - NZ_CP033719.1 Propionibacterium acidifaciens
384 6977870 6978064 + NZ_CP030073.1 Streptomyces cadmiisoli
385 8183139 8183333 + NC_013929.1 Streptomyces scabiei 87.22
386 1300431 1300625 - NZ_CP029043.1 Streptomyces nigra
387 3375735 3375896 + NZ_CP019400.1 Acidipropionibacterium acidipropionici
388 1956944 1957138 - NC_021985.1 Streptomyces collinus Tu 365
389 756251 756445 - NZ_CP049863.1 Leucobacter viscericola
390 2823932 2824126 + NZ_CP035494.1 Microbacterium protaetiae
391 3019846 3020043 + NZ_CP019607.1 Tessaracoccus flavescens
392 1337111 1337305 + NZ_CP016282.1 Cryobacterium arcticum
393 1039333 1039527 - NZ_CP030033.1 Cryobacterium soli
394 4550177 4550371 - NZ_CP022521.1 Actinoalloteichus hoggarensis
395 1035362 1035556 - NZ_CP032229.1 Streptomyces seoulensis
396 808004 808198 + NZ_CP044344.1 Nocardioides cynanchi
397 635832 636029 + NZ_CP019606.1 Tessaracoccus aquimaris
398 1909601 1909795 - NZ_CP013290.1 Janibacter indicus
399 4579110 4579304 - NC_013235.1 Nakamurella multipartita DSM 44233
400 1977421 1977618 + NZ_LT996886.1 Tessaracoccus timonensis
401 4953240 4953434 + NZ_CP016793.1 Lentzea guizhouensis
402 2486883 2487044 - NZ_CP025198.1 Acidipropionibacterium virtanenii
403 858370 858555 + NZ_CP028129.1 Rathayibacter rathayi
404 479565 479759 + NZ_CP040508.1 Rhodoluna limnophila
405 2219144 2219341 - NZ_LR134406.1 Arachnia propionica
406 2244081 2244275 - NZ_CP033724.1 Clavibacter michiganensis subsp. michiganensis
407 3095488 3095682 - NZ_CP032630.1 Protaetiibacter intestinalis
408 1246454 1246648 - NZ_CP060404.1 Streptomyces buecherae
409 3193074 3193268 + NZ_CP015079.1 Nocardioides dokdonensis FR1436
410 1552719 1552907 - NC_014220.1 Syntrophothermus lipocalidus DSM 12680
411 308920 309120 - NZ_CP072133.1 Pseudoalteromonas xiamenensis
412 1323141 1323341 - NZ_LR215048.1 Acholeplasma axanthum
413 849573 849770 + NC_022538.1 Acholeplasma palmae J233
414 1536296 1536490 - NZ_CP040752.1 Streptomyces rectiverticillatus
415 2231553 2231741 - NC_013205.1 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
416 1459323 1459517 + NZ_CP020715.1 Cnuibacter physcomitrellae
417 779590 779775 - NZ_AP017457.1 Aurantimicrobium minutum
418 2118852 2119043 - NZ_CP027770.1 Staphylococcus felis
419 2031513 2031707 - NZ_LR134501.1 Nocardiopsis dassonvillei
420 3088605 3088799 + NZ_AP018920.1 Pseudonocardia autotrophica
421 6407498 6407692 + NZ_CP023702.1 Streptomyces nitrosporeus
422 536235 536429 + NZ_CP044548.2 Janibacter melonis
423 2909793 2909987 + NZ_CP032624.1 Gryllotalpicola protaetiae
424 2642356 2642550 - NZ_CP031455.1 Streptomyces olivoreticuli subsp. olivoreticuli
425 1186447 1186641 - NZ_CP026923.1 Pontimonas salivibrio
426 205425 205619 + NC_004572.3 Tropheryma whipplei str. Twist
427 3185062 3185256 - NC_013757.1 Geodermatophilus obscurus DSM 43160
428 2370533 2370727 - NZ_CP036250.1 Egicoccus halophilus
429 1349510 1349704 + NZ_LT906453.1 Dermatophilus congolensis
430 278921 279082 - NZ_CP040635.1 Acidipropionibacterium jensenii
431 1535047 1535208 - NC_006085.1 Cutibacterium acnes KPA171202
432 2189418 2189612 - NZ_CP023690.1 Streptomyces spectabilis
433 1057629 1057820 + NZ_CP016020.1 Bacillus weihaiensis
434 502820 503014 + NZ_CP007490.1 Rhodoluna lacicola
435 1048391 1048585 - NZ_CP024957.1 Streptomyces cavourensis
436 7246702 7246887 - NZ_CP045572.1 Nonomuraea nitratireducens
437 964860 965045 + NC_018664.1 Gottschalkia acidurici 9a
438 902387 902581 - NZ_CP031194.1 Streptomyces paludis
439 1789718 1789879 - NZ_LT906441.1 Cutibacterium granulosum
440 1107647 1107841 - NZ_CP020563.1 Kitasatospora albolonga
441 6677202 6677387 - NC_013595.1 Streptosporangium roseum DSM 43021
442 1335818 1336012 - NZ_CP013738.1 Streptomyces globisporus C-1027
443 1133669 1133863 - NZ_CP070242.1 Streptomyces californicus
444 6910442 6910636 + NC_010572.1 Streptomyces griseus subsp. griseus NBRC 13350
445 825190 825378 + NZ_CP034118.1 Staphylospora marina
446 1449439 1449633 - NZ_CP072827.1 Streptomyces mobaraensis NBRC 13819 = DSM 40847
447 311573 311767 - NZ_CP011801.1 Nitrospira moscoviensis
448 1272084 1272278 - NC_021177.1 Streptomyces fulvissimus DSM 40593
449 8055065 8055259 + NC_003155.5 Streptomyces avermitilis MA-4680 = NBRC 14893
450 1736382 1736576 - NZ_CP022685.1 Streptomyces formicae
451 3194614 3194808 + NZ_CP063373.1 Streptomyces ferrugineus
452 8181451 8181645 + NZ_CP023699.1 Streptomyces kanamyceticus
453 1563685 1563879 - NZ_CP063374.1 Streptomyces chromofuscus
454 5937759 5937953 + NC_020990.1 Streptomyces albidoflavus
455 6288603 6288797 + NZ_CP031742.1 Streptomyces koyangensis
456 7402662 7402856 + NZ_CP045643.1 Streptomyces fagopyri
457 291256 291441 + NZ_CP038013.1 Spiroplasma gladiatoris
458 5478371 5478565 - NZ_CP051486.1 Streptomyces pratensis
459 1416395 1416589 - NZ_CP023695.1 Streptomyces alboniger
460 1899959 1900153 - NZ_CP027306.1 Streptomyces atratus
461 7679105 7679299 + NZ_AP023440.1 Streptomyces glomeroaurantiacus
462 7066284 7066478 + NZ_CP034687.1 Streptomyces griseoviridis
463 7125104 7125298 + NZ_CP026652.1 Streptomyces dengpaensis
464 1217141 1217335 - NZ_AP023439.1 Streptomyces tuirus
465 1785330 1785524 - NZ_CP021978.1 Streptomyces hawaiiensis
466 3604213 3604401 - NZ_AP017312.1 Aneurinibacillus soli
467 1929313 1929507 - NZ_CP023694.1 Streptomyces coeruleorubidus
468 1122005 1122199 - NZ_CP020570.1 Streptomyces violaceoruber
469 1620269 1620457 + NZ_CP046670.1 Alteromonas mediterranea
470 1751115 1751303 - NZ_CP014322.1 Alteromonas addita
471 2393658 2393846 - NC_015554.1 Alteromonas naphthalenivorans
472 1744650 1744835 + NC_014830.1 Intrasporangium calvum DSM 43043
473 1398064 1398258 - NZ_CP023703.1 Streptomyces galilaeus
474 6873667 6873861 + NZ_CP032698.1 Streptomyces hundungensis
475 1352263 1352451 + NC_018870.1 Thermacetogenium phaeum DSM 12270
476 303676 303861 + NZ_CP025057.1 Spiroplasma floricola 23-6
477 247953 248138 + NC_021846.1 Spiroplasma taiwanense CT-1
478 261499 261684 + NZ_CP012622.1 Spiroplasma cantharicola
479 304504 304689 + NZ_CP024962.1 Entomoplasma freundtii
480 298103 298288 + NZ_CP006681.1 Spiroplasma culicicola AES-1
481 1348603 1348770 - NZ_CP017812.1 Boudabousia tangfeifanii
482 277205 277372 + NC_022998.1 Spiroplasma apis B31
483 2273724 2273918 - NZ_AP024085.1 Faecalibacillus intestinalis
484 1327200 1327388 + NC_008148.1 Rubrobacter xylanophilus DSM 9941
485 1766096 1766284 - NC_013124.1 Acidimicrobium ferrooxidans DSM 10331
486 1580475 1580675 - NZ_CP058670.1 Chryseoglobus indicus
487 249418 249615 + NZ_CP009781.1 Yersinia aldovae 670-83
488 2335260 2335457 + NZ_LR134494.1 Serratia quinivorans
489 2241662 2241859 + NC_015567.1 Serratia plymuthica AS9
490 4496166 4496363 + NZ_CP011254.1 Serratia fonticola
491 132746 132934 - NC_007512.1 Pelodictyon luteolum DSM 273
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NC_012704.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00707.24 1.0 488 73.0 same-strand Translation initiation factor IF-3, C-terminal domain
2 PF00453.20 0.99 483 63 same-strand Ribosomal protein L20
3 PF00588.21 0.91 447 538 same-strand SpoU rRNA Methylase family
4 PF08032.14 0.79 389 536 same-strand RNA 2'-O ribose methyltransferase substrate binding
++ More..