Result : C4L8Z0
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Protein RnfH |
| NCBI Accession ID | CP001616.1 |
| Organism | Tolumonas auensis (strain DSM 9187 / TA4) |
| Left | 2482152 |
| Right | 2482451 |
| Strand | - |
| Nucleotide Sequence | GTGCCTGATCAAATTCAGATTGAGGTGGTATATGCCTTACCGATGCGTCAGACAACATTGACTCTGAAAATAAATACCGGGAGCAGTGTTGAAGACGCTATCCGGGAATCAGGAATTCTTGCGAGACATCCGGAAATTGATTTGGCAGTTAATAAAGTGGGGCTATTTGGCCGGGCAGTGGCATTGAGCACCCGTCTTGAGCGGCCAACCCGCATTGAGATATACCGTCCGCTACTTGCTGATCCAAAAGAAATCCGCAGACAGCGTGCTGAGAAAGCAAAGCTGCAATCGCTGAAATAA |
| Sequence | MPDQIQIEVVYALPMRQTTLTLKINTGSSVEDAIRESGILARHPEIDLAVNKVGLFGRAVALSTRLERPTRIEIYRPLLADPKEIRRQRAEKAKLQSLK |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl28922. Profile Description: Beta-grasp ubiquitin-like fold. This domain is the binding/interacting region of several protein kinases, such as the Schizosaccharomyces pombe Byr2. Byr2 is a Ser/Thr-specific protein kinase acting as mediator of signals for sexual differentiation in S. pombe by initiating a MAPK module, which is a highly conserved element in eukaryotes. Byr2 is activated by interacting with Ras, which then translocates the molecule to the plasma membrane. Ras proteins are key elements in intracellular signaling and are involved in a variety of vital processes such as DNA transcription, growth control, and differentiation. They function like molecular switches cycling between GTP-bound 'on' and GDP-bound 'off' states. |
| Pubmed ID | |
| Domain | CDD:421700 |
| Functional Category | Others |
| Uniprot ID | C4L8Z0 |
| ORF Length (Amino Acid) | 99 |
++ More..
| Conservation Analysis |
No. of Species: 257
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2482152 | 2482451 | - | NC_012691.1 | Tolumonas auensis DSM 9187 |
| 2 | 2021554 | 2021847 | - | NZ_CP025120.1 | Kangiella profundi |
| 3 | 2586370 | 2586654 | - | NZ_CP031781.1 | Vibrio parahaemolyticus |
| 4 | 1032672 | 1032929 | - | NZ_CP046793.1 | Vibrio metschnikovii |
| 5 | 765522 | 765797 | + | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 6 | 2465019 | 2465291 | - | NZ_CP040449.1 | Aeromonas simiae |
| 7 | 463819 | 464094 | + | NZ_CP035688.1 | Vibrio metoecus |
| 8 | 3994760 | 3995044 | - | NC_003910.7 | Colwellia psychrerythraea 34H |
| 9 | 2983586 | 2983864 | - | NC_013456.1 | Vibrio antiquarius |
| 10 | 2546132 | 2546395 | - | NZ_LT960611.1 | Vibrio tapetis subsp. tapetis |
| 11 | 2722194 | 2722475 | - | NZ_CP017689.1 | Thalassotalea crassostreae |
| 12 | 800548 | 800826 | + | NZ_CP044069.1 | Vibrio vulnificus |
| 13 | 3773110 | 3773352 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 14 | 634381 | 634662 | + | NZ_CP030788.1 | Vibrio campbellii |
| 15 | 2354737 | 2355018 | - | NZ_CP047475.1 | Vibrio astriarenae |
| 16 | 1031635 | 1031910 | + | NZ_CP012621.1 | Zobellella denitrificans |
| 17 | 1154983 | 1155267 | + | NZ_CP043727.1 | Yersinia canariae |
| 18 | 2922188 | 2922457 | - | NZ_CP065534.1 | Lonsdalea populi |
| 19 | 1045222 | 1045488 | - | NC_012968.1 | Methylotenera mobilis JLW8 |
| 20 | 1106082 | 1106378 | + | NZ_LR134531.1 | Pragia fontium |
| 21 | 2040829 | 2041071 | - | NZ_AP018685.1 | Vibrio rumoiensis |
| 22 | 1170664 | 1170948 | - | NZ_CP019959.1 | Vibrio owensii |
| 23 | 877936 | 878178 | + | NZ_CP025799.1 | Dickeya zeae |
| 24 | 813927 | 814205 | + | NZ_CP009354.1 | Vibrio tubiashii ATCC 19109 |
| 25 | 1579544 | 1579810 | - | NZ_CP025792.1 | Vibrio jasicida 090810c |
| 26 | 942418 | 942699 | + | NZ_CP046268.1 | Vibrio spartinae |
| 27 | 841991 | 842233 | + | NZ_LT615367.1 | Dickeya aquatica |
| 28 | 2236115 | 2236450 | - | NZ_CP009977.1 | Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 |
| 29 | 1710045 | 1710308 | - | NZ_CP009787.1 | Yersinia rohdei |
| 30 | 1194679 | 1194972 | + | NC_017554.1 | Pantoea ananatis PA13 |
| 31 | 2461951 | 2462232 | - | NZ_CP018312.1 | Vibrio rotiferianus |
| 32 | 1054132 | 1054416 | + | NZ_CP050150.1 | Hafnia alvei |
| 33 | 3804974 | 3805225 | + | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 34 | 738725 | 738982 | + | NZ_CP022741.1 | Vibrio qinghaiensis |
| 35 | 3754633 | 3754893 | - | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 36 | 571541 | 571837 | + | NZ_CP012418.1 | Kangiella sediminilitoris |
| 37 | 2455680 | 2455958 | - | NZ_CP032093.1 | Vibrio alfacsensis |
| 38 | 2230124 | 2230402 | - | NZ_AP019651.1 | Vibrio taketomensis |
| 39 | 443664 | 443942 | + | NZ_AP019657.1 | Vibrio ponticus |
| 40 | 4702071 | 4702352 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 41 | 3811406 | 3811693 | - | NC_014306.1 | Erwinia billingiae Eb661 |
| 42 | 569510 | 569788 | + | NZ_CP016414.1 | Vibrio scophthalmi |
| 43 | 3850702 | 3850986 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 44 | 488561 | 488872 | - | NZ_CP041660.1 | Catenovulum sediminis |
| 45 | 3489903 | 3490187 | - | NZ_CP032487.1 | Yersinia hibernica |
| 46 | 3191177 | 3191461 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 47 | 948827 | 949069 | + | NC_014500.1 | Dickeya dadantii 3937 |
| 48 | 748635 | 748916 | - | NZ_CP047495.1 | Pectobacterium brasiliense |
| 49 | 269682 | 269933 | - | NZ_CP011254.1 | Serratia fonticola |
| 50 | 882369 | 882611 | + | NZ_CP031560.1 | Dickeya dianthicola |
| 51 | 1871848 | 1872108 | - | NZ_CP009460.1 | Dickeya fangzhongdai |
| 52 | 2575970 | 2576239 | - | NZ_LS483470.1 | Leminorella richardii |
| 53 | 3542619 | 3542870 | - | NZ_CP046293.1 | Yersinia intermedia |
| 54 | 855993 | 856274 | + | NZ_CP034938.1 | Pectobacterium odoriferum |
| 55 | 2178954 | 2179199 | + | NZ_CP065150.1 | Vibrio kanaloae |
| 56 | 3062377 | 3062661 | + | NZ_CP007230.1 | Yersinia similis |
| 57 | 3930613 | 3930894 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 58 | 905822 | 906103 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 59 | 1123040 | 1123324 | + | NZ_CP011118.1 | Yersinia enterocolitica |
| 60 | 993066 | 993359 | + | NZ_CP038853.1 | Pantoea vagans |
| 61 | 3037448 | 3037690 | + | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 62 | 1293787 | 1294080 | + | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 63 | 1288612 | 1288938 | + | NC_022357.1 | Sulfuricella denitrificans skB26 |
| 64 | 1574585 | 1574878 | + | NZ_CP048796.1 | Providencia vermicola |
| 65 | 1762166 | 1762459 | - | NZ_CP049115.1 | Pantoea stewartii |
| 66 | 3112964 | 3113245 | - | NZ_CP015749.1 | Pectobacterium parmentieri |
| 67 | 3040508 | 3040780 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 68 | 1794193 | 1794510 | - | NZ_AP018738.1 | Ferriphaselus amnicola |
| 69 | 3846042 | 3846344 | + | NZ_LS483250.1 | Moritella yayanosii |
| 70 | 3863109 | 3863393 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 71 | 2587569 | 2587844 | - | NZ_CP039700.1 | Vibrio cyclitrophicus |
| 72 | 4062344 | 4062625 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 73 | 2610638 | 2610922 | - | NZ_CP029185.2 | Limnobaculum parvum |
| 74 | 2287942 | 2288229 | - | NZ_CP023529.1 | Lelliottia amnigena |
| 75 | 1072333 | 1072584 | + | NZ_CP071320.1 | Serratia ureilytica |
| 76 | 3995792 | 3996043 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 77 | 2690996 | 2691277 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 78 | 702295 | 702552 | - | NZ_LS483429.1 | Haemophilus aegyptius |
| 79 | 2179559 | 2179828 | - | NC_013166.1 | Kangiella koreensis DSM 16069 |
| 80 | 1019164 | 1019457 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 81 | 1276398 | 1276685 | - | NC_014207.1 | Methylotenera versatilis 301 |
| 82 | 1842172 | 1842441 | + | NZ_CP023009.1 | Lonsdalea britannica |
| 83 | 77645 | 77902 | - | NZ_LS483458.1 | Haemophilus haemolyticus |
| 84 | 1081590 | 1081856 | + | NZ_AP023184.1 | Buttiauxella agrestis |
| 85 | 3309375 | 3309635 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 86 | 319406 | 319654 | + | NZ_CP058952.1 | Chitinibacter fontanus |
| 87 | 772494 | 772736 | - | NZ_AP017372.2 | Halorhodospira halochloris |
| 88 | 3521827 | 3522069 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 89 | 3184064 | 3184339 | - | NZ_CP015581.1 | Tatumella citrea |
| 90 | 3397729 | 3398019 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 91 | 2013827 | 2014147 | - | NZ_AP012547.1 | Sulfuritalea hydrogenivorans sk43H |
| 92 | 4024499 | 4024750 | - | NZ_LT906479.1 | Serratia ficaria |
| 93 | 2933248 | 2933577 | + | NZ_AP022853.1 | Sulfurimicrobium lacus |
| 94 | 947475 | 947744 | + | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 95 | 863787 | 864077 | + | NZ_LR134201.1 | Cedecea lapagei |
| 96 | 626437 | 626694 | - | NZ_CP009610.1 | Haemophilus influenzae |
| 97 | 2339548 | 2339790 | + | NZ_CP023536.1 | Providencia alcalifaciens |
| 98 | 2863128 | 2863391 | - | NZ_CP023567.1 | Erwinia pyrifoliae |
| 99 | 1310625 | 1310930 | - | NC_012969.1 | Methylovorus glucosetrophus SIP3-4 |
| 100 | 4563971 | 4564234 | - | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 101 | 1214269 | 1214553 | + | NZ_CP006569.1 | Sodalis praecaptivus |
| 102 | 2728181 | 2728444 | - | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 103 | 654743 | 655027 | + | NZ_CP034035.1 | Brenneria rubrifaciens |
| 104 | 273775 | 274038 | - | NZ_CP065640.1 | Serratia rubidaea |
| 105 | 2593003 | 2593269 | - | NZ_AP014635.1 | Vibrio tritonius |
| 106 | 942522 | 942851 | + | NZ_CP010554.1 | Rugosibacter aromaticivorans |
| 107 | 4004651 | 4004911 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 108 | 93477 | 93719 | + | NZ_CP016176.1 | Xenorhabdus hominickii |
| 109 | 4833408 | 4833668 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 110 | 1294481 | 1294741 | - | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 111 | 3940650 | 3940973 | - | NC_006513.1 | Aromatoleum aromaticum EbN1 |
| 112 | 1086404 | 1086691 | + | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 113 | 828473 | 828754 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 114 | 3247217 | 3247504 | - | NZ_CP061511.1 | Mixta calida |
| 115 | 512950 | 513210 | + | NZ_CP011104.1 | Photorhabdus thracensis |
| 116 | 1450770 | 1451030 | + | NC_012962.1 | Photorhabdus asymbiotica |
| 117 | 2299469 | 2299714 | - | NZ_CP031123.2 | Providencia huaxiensis |
| 118 | 660325 | 660615 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 119 | 854368 | 854658 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 120 | 1678705 | 1678962 | - | NZ_AP012273.1 | Thiolapillus brandeum |
| 121 | 2240932 | 2241183 | + | NC_017857.3 | Methylophaga nitratireducenticrescens |
| 122 | 645376 | 645666 | - | NZ_CP042941.1 | Atlantibacter hermannii |
| 123 | 4238227 | 4238550 | - | NZ_CP059467.1 | Aromatoleum bremense |
| 124 | 677332 | 677595 | + | NZ_AP018689.1 | Vibrio aphrogenes |
| 125 | 3268142 | 3268399 | - | NC_019902.2 | Thioalkalivibrio nitratireducens DSM 14787 |
| 126 | 3513624 | 3513878 | - | NZ_CP005974.1 | Photobacterium gaetbulicola Gung47 |
| 127 | 4080768 | 4081019 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 128 | 2960970 | 2961230 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 129 | 3591343 | 3591606 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 130 | 3677862 | 3678122 | + | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 131 | 3500668 | 3500913 | - | NZ_CP029736.1 | Providencia rettgeri |
| 132 | 2806318 | 2806581 | - | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 133 | 1089338 | 1089646 | + | NZ_CP035129.1 | Kosakonia cowanii |
| 134 | 1179603 | 1179890 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 135 | 905001 | 905267 | + | NZ_CP023525.1 | Cedecea neteri |
| 136 | 3037606 | 3037899 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 137 | 3101693 | 3101986 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 138 | 2379125 | 2379376 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 139 | 2652463 | 2652714 | - | NC_011312.1 | Aliivibrio salmonicida LFI1238 |
| 140 | 3297715 | 3297999 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 141 | 670329 | 670577 | + | NC_011753.2 | Vibrio atlanticus |
| 142 | 2606058 | 2606345 | - | NZ_CP028271.1 | Mixta intestinalis |
| 143 | 1107302 | 1107574 | + | NZ_AP018724.1 | Sulfurivermis fontis |
| 144 | 1583270 | 1583563 | + | NZ_LS483422.1 | Providencia heimbachae |
| 145 | 3558799 | 3559062 | - | NZ_AP022508.1 | Enterobacter bugandensis |
| 146 | 1295066 | 1295335 | + | NZ_CP014007.2 | Kosakonia oryzae |
| 147 | 734585 | 734875 | - | NZ_CP053416.1 | Salmonella bongori |
| 148 | 3461881 | 3462168 | - | NZ_CP026377.1 | Mixta gaviniae |
| 149 | 2825581 | 2825871 | - | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 150 | 4339957 | 4340226 | + | NZ_CP045300.1 | Kosakonia arachidis |
| 151 | 3326273 | 3326563 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 152 | 3569807 | 3570067 | - | NC_015968.1 | Enterobacter soli |
| 153 | 3566134 | 3566385 | - | NZ_CP027986.1 | Enterobacter sichuanensis |
| 154 | 1165565 | 1165855 | + | NZ_CP041247.1 | Raoultella electrica |
| 155 | 863180 | 863440 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 156 | 2591894 | 2592223 | - | NZ_CP011568.3 | Pandoraea thiooxydans |
| 157 | 2507726 | 2507989 | + | NZ_CP023706.1 | Edwardsiella tarda |
| 158 | 2501849 | 2502100 | - | NZ_CP067057.1 | Rahnella aceris |
| 159 | 428033 | 428293 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 160 | 2909162 | 2909449 | - | NZ_LN907827.1 | Erwinia gerundensis |
| 161 | 1254152 | 1254451 | - | NZ_LT906448.1 | Pasteurella dagmatis |
| 162 | 3669829 | 3670080 | - | NZ_CP009756.1 | Enterobacter cloacae |
| 163 | 4316335 | 4316646 | - | NZ_CP039731.1 | Aquitalea aquatilis |
| 164 | 2800872 | 2801156 | - | NZ_CP071325.1 | Photobacterium ganghwense |
| 165 | 925812 | 926105 | - | NZ_LS483443.1 | Aggregatibacter segnis ATCC 33393 |
| 166 | 1791402 | 1791704 | + | NZ_CP009888.1 | Pseudoalteromonas piratica |
| 167 | 3474150 | 3474440 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 168 | 2010663 | 2010938 | + | NZ_CP014056.2 | Grimontia hollisae |
| 169 | 4021249 | 4021539 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 170 | 871784 | 872107 | + | NC_007481.1 | Pseudoalteromonas translucida |
| 171 | 4830074 | 4830334 | + | NZ_CP017279.1 | Enterobacter ludwigii |
| 172 | 2754008 | 2754298 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 173 | 568572 | 568913 | + | NZ_CP051180.1 | Ferrimonas lipolytica |
| 174 | 2723093 | 2723359 | - | NZ_AP014857.1 | Escherichia albertii |
| 175 | 1468694 | 1468954 | + | NC_009092.1 | Shewanella loihica PV-4 |
| 176 | 2961166 | 2961426 | - | NZ_CP022272.1 | Shewanella marisflavi |
| 177 | 1170336 | 1170590 | + | NZ_LR134475.1 | Klebsiella aerogenes |
| 178 | 810777 | 811040 | + | NZ_CP016043.1 | Edwardsiella hoshinae |
| 179 | 3660186 | 3660452 | + | NZ_CP044098.1 | Citrobacter portucalensis |
| 180 | 3877003 | 3877263 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 181 | 935814 | 936137 | + | NZ_CP011036.1 | Pseudoalteromonas nigrifaciens |
| 182 | 4152430 | 4152681 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 183 | 1361461 | 1361715 | + | NZ_CP060111.1 | Klebsiella michiganensis |
| 184 | 1214926 | 1215180 | + | NZ_CP046672.1 | Raoultella ornithinolytica |
| 185 | 3870738 | 3871007 | - | NZ_CP015113.1 | Kosakonia radicincitans |
| 186 | 1576949 | 1577248 | + | NZ_CP028926.1 | Pasteurella multocida |
| 187 | 2236021 | 2236314 | - | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
| 188 | 2594740 | 2595027 | + | NZ_CP019706.1 | Pantoea alhagi |
| 189 | 2827633 | 2827893 | - | NZ_CP070624.1 | Photobacterium damselae subsp. damselae |
| 190 | 1204474 | 1204725 | + | NZ_CP017415.1 | Acidihalobacter yilgarnenesis |
| 191 | 4096782 | 4097072 | - | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 192 | 1204688 | 1204978 | + | NZ_CP054254.1 | Klebsiella variicola |
| 193 | 3274176 | 3274466 | - | NZ_LR134340.1 | Escherichia marmotae |
| 194 | 478780 | 479052 | - | NZ_CP026047.1 | Raoultella planticola |
| 195 | 5062905 | 5063171 | - | NZ_LT556085.1 | Citrobacter amalonaticus |
| 196 | 1889946 | 1890227 | + | NZ_CP046670.1 | Alteromonas mediterranea |
| 197 | 1252512 | 1252769 | + | NZ_CP050508.1 | Raoultella terrigena |
| 198 | 1325234 | 1325485 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 199 | 1503864 | 1504163 | - | NZ_CP041335.1 | Chitinolyticbacter meiyuanensis |
| 200 | 2881476 | 2881739 | + | NZ_CP072425.1 | Pseudoalteromonas viridis |
| 201 | 4297431 | 4297724 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 202 | 2752547 | 2752813 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 203 | 3680595 | 3680888 | - | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 204 | 2806177 | 2806470 | + | NC_007626.1 | Magnetospirillum magneticum AMB-1 |
| 205 | 1116769 | 1117011 | + | NZ_CP045845.1 | Kluyvera intermedia |
| 206 | 4621975 | 4622253 | + | NZ_CP038469.1 | Citrobacter tructae |
| 207 | 1445529 | 1445795 | - | NZ_CP033744.1 | Citrobacter freundii |
| 208 | 3671468 | 3671734 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 209 | 1032181 | 1032432 | + | NZ_CP054058.1 | Scandinavium goeteborgense |
| 210 | 1042730 | 1043038 | + | NC_011901.1 | Thioalkalivibrio sulfidiphilus HL-EbGr7 |
| 211 | 940876 | 941142 | - | NZ_CP036200.1 | Shewanella maritima |
| 212 | 1410211 | 1410480 | + | NC_014722.1 | Mycetohabitans rhizoxinica HKI 454 |
| 213 | 700333 | 700623 | + | NZ_LR699114.1 | Aquicella lusitana |
| 214 | 125417 | 125749 | + | NZ_CP015031.1 | Basfia succiniciproducens |
| 215 | 520183 | 520515 | + | NC_006300.1 | [Mannheimia] succiniciproducens MBEL55E |
| 216 | 121478 | 121768 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 217 | 2018727 | 2018993 | - | NZ_CP033078.1 | Vibrio zhugei |
| 218 | 1447985 | 1448239 | + | NZ_CP036175.1 | Klebsiella huaxiensis |
| 219 | 1775872 | 1776138 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 220 | 1604019 | 1604312 | - | NC_008789.1 | Halorhodospira halophila SL1 |
| 221 | 3265249 | 3265539 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 222 | 1139471 | 1139794 | + | NZ_AP021881.1 | Sulfuriferula nivalis |
| 223 | 2333610 | 2333933 | - | NZ_CP045235.1 | Burkholderia cepacia |
| 224 | 534254 | 534547 | + | NZ_CP031961.1 | Pseudoalteromonas tunicata |
| 225 | 2636829 | 2637089 | - | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 226 | 849119 | 849361 | + | NZ_CP007039.1 | Pseudomonas cichorii JBC1 |
| 227 | 1165185 | 1165490 | + | NZ_LT906463.1 | Haemophilus pittmaniae |
| 228 | 2271488 | 2271751 | + | NZ_CP035467.1 | Methylotuvimicrobium buryatense |
| 229 | 6035970 | 6036248 | - | NZ_CP014158.1 | Pseudomonas citronellolis |
| 230 | 2283983 | 2284267 | + | NC_016112.1 | Methylotuvimicrobium alcaliphilum 20Z |
| 231 | 1554142 | 1554396 | + | NC_014012.1 | Shewanella violacea DSS12 |
| 232 | 2505065 | 2505328 | - | NZ_CP013414.1 | Burkholderia ubonensis |
| 233 | 3529718 | 3529969 | - | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 234 | 2282505 | 2282768 | - | NZ_CP020737.1 | Paraburkholderia acidophila |
| 235 | 4103305 | 4103556 | - | NZ_LR134494.1 | Serratia quinivorans |
| 236 | 4898251 | 4898493 | - | NZ_CP067022.1 | Pseudomonas cannabina pv. alisalensis |
| 237 | 1849930 | 1850196 | - | NC_006526.2 | Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 |
| 238 | 1142621 | 1142914 | - | NZ_CP070505.1 | Pseudomonas toyotomiensis |
| 239 | 2808852 | 2809124 | + | NC_002977.6 | Methylococcus capsulatus str. Bath |
| 240 | 3009943 | 3010218 | - | NC_002977.6 | Methylococcus capsulatus str. Bath |
| 241 | 1074083 | 1074364 | + | NZ_CP011039.1 | Pseudoalteromonas spongiae UST010723-006 |
| 242 | 1368682 | 1368936 | + | NZ_CP060009.1 | Pseudomonas sediminis |
| 243 | 1959488 | 1959778 | + | NC_008709.1 | Psychromonas ingrahamii 37 |
| 244 | 1098359 | 1098607 | + | NZ_CP013124.1 | Pseudomonas mendocina S5.2 |
| 245 | 2174063 | 2174341 | - | NC_008340.1 | Alkalilimnicola ehrlichii MLHE-1 |
| 246 | 4963849 | 4964106 | - | NZ_CP068034.2 | Pseudomonas syringae |
| 247 | 5082748 | 5082990 | - | NC_004578.1 | Pseudomonas syringae pv. tomato str. DC3000 |
| 248 | 5335392 | 5335640 | - | NZ_AP014862.1 | Pseudomonas furukawaii |
| 249 | 4272742 | 4272990 | - | NZ_CP068551.1 | Pseudomonas khazarica |
| 250 | 2270358 | 2270684 | - | NZ_CP029822.1 | Entomomonas moraniae |
| 251 | 5030071 | 5030325 | - | NZ_CP042804.1 | Pseudomonas amygdali pv. tabaci str. ATCC 11528 |
| 252 | 5267841 | 5268119 | - | NZ_CP047698.1 | Pseudomonas knackmussii |
| 253 | 5771631 | 5771873 | - | NZ_CP014870.1 | Pseudomonas silesiensis |
| 254 | 2509266 | 2509508 | - | NZ_AP014936.1 | Sulfurifustis variabilis |
| 255 | 909724 | 909966 | + | NZ_CP062252.1 | Pseudomonas allokribbensis |
| 256 | 3224436 | 3224678 | - | NZ_CP048810.1 | Pseudomonas bijieensis |
| 257 | 963833 | 964075 | + | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 258 | 5193751 | 5193996 | - | NZ_CP049044.1 | Pseudomonas psychrophila |
| 259 | 4118909 | 4119157 | - | NZ_CP062158.2 | Pseudomonas lundensis |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP031781.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01025.21 | 0.72 | 184 | 3358 | same-strand | GrpE |
| 2 | PF20143.1 | 0.7 | 179 | 2373.0 | opposite-strand | ATP-NAD kinase C-terminal domain |
| 3 | PF02463.21 | 0.77 | 199 | 626 | opposite-strand | RecF/RecN/SMC N terminal domain |
| 4 | PF04355.15 | 0.83 | 214 | 76 | opposite-strand | SmpA / OmlA family |
| 5 | PF03364.22 | 0.96 | 247 | 17.0 | same-strand | Polyketide cyclase / dehydrase and lipid transport |
| 6 | PF10604.11 | 0.95 | 244 | 17 | same-strand | Polyketide cyclase / dehydrase and lipid transport |
| 7 | PF01668.20 | 0.94 | 242 | 611 | opposite-strand | SmpB protein |
| 8 | PF01513.23 | 0.63 | 163 | 2373.0 | opposite-strand | ATP-NAD kinase N-terminal domain |
| 9 | PF13476.8 | 0.74 | 190 | 624 | opposite-strand | AAA domain |
++ More..