Result : C4K838
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Cell division topological specificity factor |
| NCBI Accession ID | CP001277.1 |
| Organism | Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) |
| Left | 18789 |
| Right | 19073 |
| Strand | + |
| Nucleotide Sequence | ATGGGTTTTTTTGATTTCTTTTCACCCGATAAAAAAAACAGTGCTGCAAATATTGCGAAAGATCGGTTGCAAATTATCGTGAGGGAGCGTCGTTGTTGTGACAGAGATCCTCTTTATTTATCTGATATGAAGCGCGATATCTTGGCGGTGATTTGTAAATATGTTCAGTTGGATCCCAACGCGCTTCATGTTCAATTTGAGCAAAAGGAAGATGATGTTTCGGTTTTGGAGCTGAATGTCATCTTACCGGAAGTCAGTAGCACAGGTGATTGTTCTAAGCCCTGA |
| Sequence | MGFFDFFSPDKKNSAANIAKDRLQIIVRERRCCDRDPLYLSDMKRDILAVICKYVQLDPNALHVQFEQKEDDVSVLELNVILPEVSSTGDCSKP |
| Source of smORF | Swiss-Prot |
| Function | Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. {ECO:0000255|HAMAP-Rule:MF_00262}. |
| Pubmed ID | 19451630 |
| Domain | CDD:412433 |
| Functional Category | Others |
| Uniprot ID | C4K838 |
| ORF Length (Amino Acid) | 94 |
++ More..
| Conservation Analysis |
No. of Species: 210
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 253414 | 253683 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 2 | 476200 | 476469 | - | NZ_CP009787.1 | Yersinia rohdei |
| 3 | 611196 | 611465 | + | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 4 | 2237500 | 2237769 | + | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 5 | 2137179 | 2137448 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 6 | 2031630 | 2031899 | + | NZ_CP032487.1 | Yersinia hibernica |
| 7 | 4020128 | 4020397 | - | NZ_CP007230.1 | Yersinia similis |
| 8 | 2096282 | 2096551 | - | NZ_CP046293.1 | Yersinia intermedia |
| 9 | 2416684 | 2416953 | + | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 10 | 3206692 | 3206988 | + | NZ_CP023536.1 | Providencia alcalifaciens |
| 11 | 1762545 | 1762814 | + | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 12 | 2520919 | 2521188 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 13 | 5080805 | 5081074 | + | NZ_CP011254.1 | Serratia fonticola |
| 14 | 68808 | 69077 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 15 | 2146940 | 2147209 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 16 | 2173740 | 2174009 | - | NZ_CP071320.1 | Serratia ureilytica |
| 17 | 2223119 | 2223388 | + | NZ_CP016948.1 | Serratia surfactantfaciens |
| 18 | 2954073 | 2954342 | + | NZ_LT906479.1 | Serratia ficaria |
| 19 | 2925791 | 2926060 | + | NZ_CP038662.1 | Serratia nematodiphila |
| 20 | 3027685 | 3027954 | + | NZ_CP048784.1 | Serratia liquefaciens |
| 21 | 3031787 | 3032056 | + | NZ_LR134494.1 | Serratia quinivorans |
| 22 | 3692923 | 3693192 | + | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 23 | 2502596 | 2502865 | + | NZ_CP043727.1 | Yersinia canariae |
| 24 | 1647013 | 1647282 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 25 | 3036130 | 3036399 | + | NC_015567.1 | Serratia plymuthica AS9 |
| 26 | 2364186 | 2364455 | + | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 27 | 955710 | 955979 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 28 | 4649667 | 4649936 | + | NZ_CP011104.1 | Photorhabdus thracensis |
| 29 | 2776600 | 2776869 | + | NC_012962.1 | Photorhabdus asymbiotica |
| 30 | 1229919 | 1230188 | - | NC_010554.1 | Proteus mirabilis HI4320 |
| 31 | 4233055 | 4233324 | + | NZ_CP065640.1 | Serratia rubidaea |
| 32 | 3516300 | 3516569 | + | NZ_CP026364.1 | Proteus hauseri |
| 33 | 1959799 | 1960068 | + | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 34 | 2390966 | 2391244 | + | NZ_LS483422.1 | Providencia heimbachae |
| 35 | 2701824 | 2702108 | - | NZ_CP029736.1 | Providencia rettgeri |
| 36 | 1510297 | 1510566 | + | NZ_CP067057.1 | Rahnella aceris |
| 37 | 1367213 | 1367497 | - | NZ_CP031123.2 | Providencia huaxiensis |
| 38 | 3442967 | 3443236 | - | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 39 | 2449891 | 2450169 | + | NZ_CP048796.1 | Providencia vermicola |
| 40 | 2035304 | 2035573 | - | NZ_CP050150.1 | Hafnia alvei |
| 41 | 2528846 | 2529112 | + | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 42 | 250428 | 250697 | + | NZ_CP023706.1 | Edwardsiella tarda |
| 43 | 2959770 | 2960036 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 44 | 145232 | 145498 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 45 | 2247424 | 2247690 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 46 | 284065 | 284331 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 47 | 2830480 | 2830746 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 48 | 1993136 | 1993405 | + | NZ_CP034035.1 | Brenneria rubrifaciens |
| 49 | 2348134 | 2348403 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 50 | 1918885 | 1919154 | + | NZ_CP065534.1 | Lonsdalea populi |
| 51 | 924842 | 925108 | - | NZ_CP027107.1 | Cronobacter sakazakii |
| 52 | 1656490 | 1656756 | - | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 53 | 2484678 | 2484944 | + | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 54 | 1492895 | 1493161 | - | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 55 | 2566816 | 2567082 | + | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 56 | 3156407 | 3156676 | + | NZ_CP023009.1 | Lonsdalea britannica |
| 57 | 1864040 | 1864309 | + | NZ_CP014137.1 | Brenneria goodwinii |
| 58 | 2387535 | 2387819 | + | NC_012880.1 | Musicola paradisiaca Ech703 |
| 59 | 2601611 | 2601880 | + | NZ_CP034938.1 | Pectobacterium odoriferum |
| 60 | 1090401 | 1090670 | - | NZ_CP017482.1 | Pectobacterium polaris |
| 61 | 2280954 | 2281223 | - | NZ_CP038498.1 | Pectobacterium punjabense |
| 62 | 3872786 | 3873055 | - | NZ_CP047495.1 | Pectobacterium brasiliense |
| 63 | 2507973 | 2508242 | + | NZ_CP051652.1 | Pectobacterium carotovorum |
| 64 | 1682339 | 1682608 | + | NZ_CP015749.1 | Pectobacterium parmentieri |
| 65 | 4070336 | 4070605 | - | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 66 | 2400470 | 2400739 | - | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 67 | 2191887 | 2192156 | + | NZ_CP016043.1 | Edwardsiella hoshinae |
| 68 | 1583040 | 1583309 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 69 | 3487604 | 3487873 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 70 | 2439247 | 2439516 | + | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 71 | 2463348 | 2463638 | + | NZ_LT615367.1 | Dickeya aquatica |
| 72 | 3744566 | 3744832 | + | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 73 | 2516730 | 2516996 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 74 | 2467673 | 2467963 | + | NZ_CP025799.1 | Dickeya zeae |
| 75 | 2280260 | 2280553 | - | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 76 | 2548895 | 2549176 | + | NC_014500.1 | Dickeya dadantii 3937 |
| 77 | 215914 | 216195 | - | NZ_CP009460.1 | Dickeya fangzhongdai |
| 78 | 2082335 | 2082604 | + | NZ_LS483470.1 | Leminorella richardii |
| 79 | 2474765 | 2475046 | + | NZ_CP031560.1 | Dickeya dianthicola |
| 80 | 4718349 | 4718630 | + | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 81 | 3462353 | 3462622 | - | NZ_CP019706.1 | Pantoea alhagi |
| 82 | 1849562 | 1849834 | - | NZ_LR134531.1 | Pragia fontium |
| 83 | 3561381 | 3561647 | - | NZ_CP042941.1 | Atlantibacter hermannii |
| 84 | 2657567 | 2657836 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 85 | 2774881 | 2775150 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 86 | 2775918 | 2776187 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 87 | 4514860 | 4515129 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 88 | 2864124 | 2864393 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 89 | 1995545 | 1995814 | + | NZ_CP017279.1 | Enterobacter ludwigii |
| 90 | 2987557 | 2987823 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 91 | 1850958 | 1851224 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 92 | 2160116 | 2160388 | + | NZ_LN907827.1 | Erwinia gerundensis |
| 93 | 4235462 | 4235731 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 94 | 2485754 | 2486020 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 95 | 1205395 | 1205661 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 96 | 1224279 | 1224545 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 97 | 1215650 | 1215916 | - | NZ_AP014857.1 | Escherichia albertii |
| 98 | 1665904 | 1666170 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 99 | 2832711 | 2832977 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 100 | 674315 | 674584 | + | NZ_CP049115.1 | Pantoea stewartii |
| 101 | 1943807 | 1944085 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 102 | 1903133 | 1903402 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 103 | 2013161 | 2013430 | - | NZ_CP041247.1 | Raoultella electrica |
| 104 | 3314017 | 3314286 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 105 | 5180352 | 5180621 | + | NZ_CP026047.1 | Raoultella planticola |
| 106 | 1980445 | 1980714 | - | NZ_CP054254.1 | Klebsiella variicola |
| 107 | 2285391 | 2285660 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 108 | 2375226 | 2375495 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 109 | 2005015 | 2005284 | + | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 110 | 1523052 | 1523321 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 111 | 581208 | 581477 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 112 | 4424512 | 4424778 | + | NZ_CP053416.1 | Salmonella bongori |
| 113 | 1141789 | 1142055 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 114 | 1904840 | 1905109 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 115 | 2706335 | 2706601 | + | NC_015968.1 | Enterobacter soli |
| 116 | 1913628 | 1913894 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 117 | 714773 | 715039 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 118 | 537108 | 537374 | + | NZ_CP033744.1 | Citrobacter freundii |
| 119 | 1959309 | 1959575 | + | NC_013716.1 | Citrobacter rodentium ICC168 |
| 120 | 2753984 | 2754253 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 121 | 2409095 | 2409364 | + | NZ_CP061511.1 | Mixta calida |
| 122 | 2532579 | 2532848 | + | NZ_CP026377.1 | Mixta gaviniae |
| 123 | 1610434 | 1610703 | + | NZ_CP028271.1 | Mixta intestinalis |
| 124 | 2035003 | 2035272 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 125 | 1822514 | 1822783 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 126 | 1901573 | 1901839 | - | NZ_LR134340.1 | Escherichia marmotae |
| 127 | 817038 | 817304 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 128 | 2133662 | 2133931 | - | NC_017554.1 | Pantoea ananatis PA13 |
| 129 | 2224367 | 2224636 | + | NZ_CP015581.1 | Tatumella citrea |
| 130 | 4039365 | 4039634 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 131 | 2223095 | 2223364 | + | NZ_CP034148.1 | Pantoea agglomerans |
| 132 | 1851606 | 1851875 | - | NZ_CP045720.1 | Pantoea eucalypti |
| 133 | 1834041 | 1834310 | - | NZ_CP038853.1 | Pantoea vagans |
| 134 | 4116980 | 4117246 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 135 | 2757518 | 2757787 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 136 | 1342035 | 1342301 | + | NZ_CP038469.1 | Citrobacter tructae |
| 137 | 4550237 | 4550503 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 138 | 1848264 | 1848539 | - | NZ_LR134201.1 | Cedecea lapagei |
| 139 | 1926310 | 1926585 | - | NZ_CP023525.1 | Cedecea neteri |
| 140 | 2128199 | 2128468 | - | NZ_CP050508.1 | Raoultella terrigena |
| 141 | 2031154 | 2031423 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 142 | 2151846 | 2152121 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 143 | 2061711 | 2061986 | + | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 144 | 1946878 | 1947147 | + | NZ_CP029185.2 | Limnobaculum parvum |
| 145 | 2065217 | 2065501 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 146 | 1923338 | 1923607 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 147 | 1744991 | 1745266 | - | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 148 | 1799657 | 1799923 | + | NZ_CP022741.1 | Vibrio qinghaiensis |
| 149 | 1157566 | 1157826 | - | NC_011312.1 | Aliivibrio salmonicida LFI1238 |
| 150 | 868298 | 868561 | - | NZ_CP030788.1 | Vibrio campbellii |
| 151 | 917421 | 917684 | + | NZ_CP019959.1 | Vibrio owensii |
| 152 | 1112162 | 1112425 | - | NZ_CP009467.1 | Vibrio harveyi |
| 153 | 1325639 | 1325902 | + | NZ_CP025792.1 | Vibrio jasicida 090810c |
| 154 | 2781428 | 2781691 | - | NZ_CP046793.1 | Vibrio metschnikovii |
| 155 | 506195 | 506458 | + | NZ_CP065150.1 | Vibrio kanaloae |
| 156 | 1071837 | 1072100 | - | NZ_CP045350.1 | Vibrio aquimaris |
| 157 | 2311633 | 2311896 | + | NZ_CP009354.1 | Vibrio tubiashii ATCC 19109 |
| 158 | 2235833 | 2236096 | + | NZ_CP032093.1 | Vibrio alfacsensis |
| 159 | 2749595 | 2749858 | + | NC_013456.1 | Vibrio antiquarius |
| 160 | 1768183 | 1768446 | + | NZ_CP033078.1 | Vibrio zhugei |
| 161 | 2068059 | 2068322 | + | NZ_CP016414.1 | Vibrio scophthalmi |
| 162 | 2212883 | 2213146 | + | NZ_CP018312.1 | Vibrio rotiferianus |
| 163 | 891424 | 891687 | - | NZ_AP019651.1 | Vibrio taketomensis |
| 164 | 354884 | 355135 | - | NC_004545.1 | Buchnera aphidicola str. Bp (Baizongia pistaciae) |
| 165 | 1745334 | 1745597 | + | NZ_CP014035.2 | Vibrio fluvialis |
| 166 | 1498073 | 1498336 | - | NZ_CP040990.1 | Vibrio furnissii |
| 167 | 1952142 | 1952405 | + | NZ_AP019657.1 | Vibrio ponticus |
| 168 | 2356689 | 2356952 | + | NZ_CP031781.1 | Vibrio parahaemolyticus |
| 169 | 1638877 | 1639140 | + | NZ_CP035688.1 | Vibrio metoecus |
| 170 | 1344664 | 1344927 | - | NZ_CP005974.1 | Photobacterium gaetbulicola Gung47 |
| 171 | 2391403 | 2391666 | + | NZ_AP014635.1 | Vibrio tritonius |
| 172 | 1967995 | 1968258 | + | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 173 | 998649 | 998918 | - | NZ_CP040021.1 | Salinivibrio kushneri |
| 174 | 921152 | 921415 | - | NZ_CP039700.1 | Vibrio cyclitrophicus |
| 175 | 1001025 | 1001288 | - | NZ_CP071325.1 | Photobacterium ganghwense |
| 176 | 1339722 | 1339985 | - | NZ_CP046268.1 | Vibrio spartinae |
| 177 | 2013100 | 2013363 | + | NZ_CP009977.1 | Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 |
| 178 | 1040193 | 1040456 | - | NZ_CP044069.1 | Vibrio vulnificus |
| 179 | 1364644 | 1364907 | - | NZ_CP031416.1 | Gallaecimonas mangrovi |
| 180 | 1947085 | 1947345 | + | NZ_CP047475.1 | Vibrio astriarenae |
| 181 | 906441 | 906704 | - | NC_011753.2 | Vibrio atlanticus |
| 182 | 885224 | 885484 | - | NZ_AP018689.1 | Vibrio aphrogenes |
| 183 | 982614 | 982877 | - | NZ_CP013188.1 | Pseudoalteromonas phenolica |
| 184 | 182028 | 182288 | + | NZ_CP014056.2 | Grimontia hollisae |
| 185 | 394442 | 394705 | + | NZ_CP072426.1 | Pseudoalteromonas viridis |
| 186 | 1824710 | 1824970 | + | NZ_AP018685.1 | Vibrio rumoiensis |
| 187 | 583554 | 583820 | - | NZ_CP072135.1 | Pseudoalteromonas xiamenensis |
| 188 | 3265004 | 3265264 | - | NZ_CP041660.1 | Catenovulum sediminis |
| 189 | 2618446 | 2618712 | + | NZ_CP050851.1 | Aeromonas hydrophila |
| 190 | 714221 | 714484 | - | NZ_CP011029.1 | Pseudoalteromonas espejiana DSM 9414 |
| 191 | 69295 | 69558 | + | NZ_CP027524.1 | Pseudoalteromonas carrageenovora |
| 192 | 572335 | 572598 | - | NZ_CP033066.1 | Pseudoalteromonas agarivorans |
| 193 | 2429591 | 2429854 | + | NZ_CP070624.1 | Photobacterium damselae subsp. damselae |
| 194 | 718100 | 718363 | - | NZ_CP011026.1 | Pseudoalteromonas arctica A 37-1-2 |
| 195 | 2169004 | 2169267 | + | NZ_LT960611.1 | Vibrio tapetis subsp. tapetis |
| 196 | 571583 | 571849 | - | NC_007482.1 | Pseudoalteromonas translucida |
| 197 | 614880 | 615146 | - | NZ_CP011037.1 | Pseudoalteromonas nigrifaciens |
| 198 | 302146 | 302409 | - | NZ_CP019628.1 | Pseudoalteromonas aliena |
| 199 | 659827 | 660090 | - | NZ_CP011031.1 | Pseudoalteromonas issachenkonii |
| 200 | 660107 | 660370 | - | NZ_CP011042.1 | Pseudoalteromonas tetraodonis |
| 201 | 2192157 | 2192417 | - | NC_010334.1 | Shewanella halifaxensis HAW-EB4 |
| 202 | 743353 | 743619 | - | NZ_CP044060.1 | Aeromonas veronii |
| 203 | 912491 | 912757 | - | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 204 | 1111767 | 1112027 | - | NZ_CP022355.1 | Paraphotobacterium marinum |
| 205 | 192822 | 193085 | - | NZ_CP032091.1 | Pseudoalteromonas donghaensis |
| 206 | 764458 | 764721 | - | NZ_CP031962.1 | Pseudoalteromonas tunicata |
| 207 | 2020668 | 2020961 | + | NZ_CP012621.1 | Zobellella denitrificans |
| 208 | 1455812 | 1456075 | - | NZ_CP044399.1 | Moritella marina ATCC 15381 |
| 209 | 854337 | 854597 | + | NZ_LS483250.1 | Moritella yayanosii |
| 210 | 1338607 | 1338855 | - | NZ_CP021425.1 | Oleiphilus messinensis |
| 211 | 982815 | 983069 | - | NZ_CP031093.1 | Hydrocarboniclastica marina |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP011078.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF03843.15 | 0.72 | 152 | 3345.5 | opposite-strand | Outer membrane lipoprotein Slp family |
| 2 | PF00501.30 | 0.82 | 172 | 1354.5 | opposite-strand | AMP-binding enzyme |
| 3 | PF13193.8 | 0.82 | 173 | 1356 | opposite-strand | AMP-binding enzyme C-terminal domain |
| 4 | PF01612.22 | 0.85 | 179 | 111 | opposite-strand | 3'-5' exonuclease |
| 5 | PF00570.25 | 0.85 | 179 | 111 | opposite-strand | HRDC domain |
| 6 | PF01656.25 | 1.0 | 209 | 4.0 | same-strand | CobQ/CobB/MinD/ParA nucleotide binding domain |
| 7 | PF13614.8 | 1.0 | 209 | 4.0 | same-strand | AAA domain |
| 8 | PF05209.15 | 1.0 | 210 | 840 | same-strand | Septum formation inhibitor MinC, N-terminal domain |
| 9 | PF03775.18 | 1.0 | 210 | 840 | same-strand | Septum formation inhibitor MinC, C-terminal domain |
| 10 | PF05166.15 | 0.97 | 204 | 1674.0 | opposite-strand | YcgL domain |
| 11 | PF01557.20 | 0.66 | 138 | 2268.0 | opposite-strand | Fumarylacetoacetate (FAA) hydrolase family |
++ More..