Protein Information |
Information Type | Description |
---|---|
Protein name | Sec-independent protein translocase protein TatA |
NCBI Accession ID | CP001227.1 |
Organism | Rickettsia peacockii (strain Rustic) |
Left | 547678 |
Right | 547845 |
Strand | + |
Nucleotide Sequence | ATGGGAATGAGCTTTAGCCATTTATTAATAGTTTTATTAATTATTTTTGTATTATTCGGTGCCGGCAAATTACCGCAAGTCATGTCCGATCTTGCTAAAGGTCTTAAAGCTTTTAAAGACGGCATGAAAGACGACGGTAGTGATAATGATAATGATAAAAATAAATAA |
Sequence | MGMSFSHLLIVLLIIFVLFGAGKLPQVMSDLAKGLKAFKDGMKDDGSDNDNDKNK |
Source of smORF | Swiss-Prot |
Function | Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. {ECO:0000255|HAMAP-Rule:MF_00236}. |
Pubmed ID | 20027221 |
Domain | CDD:294511 |
Functional Category | Others |
Uniprot ID | C4K1G9 |
ORF Length (Amino Acid) | 55 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 1066231 | 1066392 | - | NC_010263.3 | Rickettsia rickettsii str. Iowa |
2 | 1072854 | 1073015 | - | NC_016639.1 | Rickettsia slovaca 13-B |
3 | 1077394 | 1077555 | - | NZ_AP019864.1 | Rickettsia heilongjiangensis |
4 | 393931 | 394092 | - | NC_017058.1 | Rickettsia australis str. Cutlack |
5 | 1109874 | 1110035 | + | NZ_AP019563.1 | Rickettsia asiatica |
6 | 964765 | 964929 | - | NC_016929.1 | Rickettsia canadensis str. CA410 |
7 | 1064977 | 1065138 | - | NC_003103.1 | Rickettsia conorii str. Malish 7 |
8 | 1015813 | 1015974 | + | NC_009881.1 | Rickettsia akari str. Hartford |
9 | 935568 | 935732 | - | NC_017049.1 | Rickettsia prowazekii str. Chernikova |
10 | 522899 | 523060 | + | NZ_LN794217.1 | Rickettsia monacensis |
11 | 935830 | 935991 | - | NC_017066.1 | Rickettsia typhi str. TH1527 |
12 | 1506316 | 1506471 | + | NC_007940.1 | Rickettsia bellii RML369-C |
13 | 48079 | 48252 | + | NZ_CP029356.1 | Azospirillum thermophilum |
14 | 2705345 | 2705485 | - | NC_013959.1 | Sideroxydans lithotrophicus ES-1 |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF00590.22 | 0.86 | 12 | 1305.5 | same-strand | Tetrapyrrole (Corrin/Porphyrin) Methylases |
2 | PF04608.15 | 0.86 | 12 | 78.5 | opposite-strand | Phosphatidylglycerophosphatase A |
3 | PF00829.23 | 0.86 | 12 | 769.0 | opposite-strand | Ribosomal prokaryotic L21 protein |
4 | PF01016.21 | 0.86 | 12 | 1111.0 | opposite-strand | Ribosomal L27 protein |
5 | PF00696.30 | 0.79 | 11 | 1656 | opposite-strand | Amino acid kinase family |
6 | PF13840.8 | 0.79 | 11 | 1656 | opposite-strand | ACT domain |