Result : C4K1B7
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 50S ribosomal protein L28 |
| NCBI Accession ID | CP001227.1 |
| Organism | Rickettsia peacockii (strain Rustic) |
| Left | 472074 |
| Right | 472367 |
| Strand | + |
| Nucleotide Sequence | ATGTCTCGTAAGTGCGAACTCACAGGTGTGGGTGTTTTATACGGCAACAATGTATCACATTCTCAGCGTAAAACTAGAAGACGTTTTAAACCTAACCTAAGATCGGTTAAGTTTACAAGTGATATAACAGCCGGGGAATATAGATTATCGGTTAATGCTAGATGTATTAGTTCAGTGGAAAAAGCCGGGGGTTTTGATGCATATATTCTAAAAGCCGATGATAATGTTTTATCAAGTAACGCTAGAGCTATTAAGAAAAAAATAATTCAGACTAAAACAGCAAAATCATTATGA |
| Sequence | MSRKCELTGVGVLYGNNVSHSQRKTRRRFKPNLRSVKFTSDITAGEYRLSVNARCISSVEKAGGFDAYILKADDNVLSSNARAIKKKIIQTKTAKSL |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl00367. Profile Description: Ribosomal L28 family. This model describes bacterial and chloroplast forms of the 50S ribosomal protein L28, a polypeptide about 60 amino acids in length. Mitochondrial homologs differ substantially in architecture (e.g. SP|P36525 from Saccharomyces cerevisiae, which is 258 amino acids long) and are not included. [Protein synthesis, Ribosomal proteins: synthesis and modification] |
| Pubmed ID | 20027221 |
| Domain | CDD:412338 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | C4K1B7 |
| ORF Length (Amino Acid) | 97 |
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| Conservation Analysis |
No. of Species: 125
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 129131 | 129424 | + | NC_003103.1 | Rickettsia conorii str. Malish 7 |
| 2 | 132391 | 132684 | + | NC_016639.1 | Rickettsia slovaca 13-B |
| 3 | 26055 | 26348 | - | NC_017058.1 | Rickettsia australis str. Cutlack |
| 4 | 131717 | 132010 | + | NC_010263.3 | Rickettsia rickettsii str. Iowa |
| 5 | 134219 | 134512 | + | NC_009881.1 | Rickettsia akari str. Hartford |
| 6 | 134491 | 134784 | + | NZ_AP019864.1 | Rickettsia heilongjiangensis |
| 7 | 248078 | 248371 | + | NZ_LN794217.1 | Rickettsia monacensis |
| 8 | 113381 | 113674 | - | NZ_AP019563.1 | Rickettsia asiatica |
| 9 | 109845 | 110138 | + | NC_016929.1 | Rickettsia canadensis str. CA410 |
| 10 | 1379657 | 1379950 | - | NC_007940.1 | Rickettsia bellii RML369-C |
| 11 | 109500 | 109793 | + | NC_017049.1 | Rickettsia prowazekii str. Chernikova |
| 12 | 49441 | 49734 | - | NC_017066.1 | Rickettsia typhi str. TH1527 |
| 13 | 2245902 | 2246219 | - | NC_012846.1 | Bartonella grahamii as4aup |
| 14 | 860267 | 860554 | - | NZ_CP058235.1 | Bartonella alsatica |
| 15 | 1779616 | 1779933 | - | NZ_LR134527.1 | Bartonella elizabethae |
| 16 | 196397 | 196714 | - | NZ_CP031843.2 | Bartonella kosoyi |
| 17 | 149722 | 150027 | - | NZ_LR134529.1 | Bartonella vinsonii |
| 18 | 2482443 | 2482760 | - | NC_010161.1 | Bartonella tribocorum CIP 105476 |
| 19 | 1912119 | 1912436 | - | NZ_CP031844.2 | Bartonella krasnovii |
| 20 | 1442438 | 1442731 | - | NC_014932.1 | Bartonella clarridgeiae 73 |
| 21 | 4370865 | 4371161 | - | NZ_CP010803.1 | Martelella endophytica |
| 22 | 1500586 | 1500879 | - | NZ_AP019773.1 | Bartonella quintana |
| 23 | 410328 | 410621 | - | NZ_CP010401.1 | Bartonella ancashensis |
| 24 | 3347085 | 3347381 | - | NZ_AP014648.1 | Methyloceanibacter caenitepidi |
| 25 | 3980491 | 3980790 | + | NZ_CP032694.1 | Rhizobium jaguaris |
| 26 | 3342346 | 3342645 | + | NZ_LR723670.1 | Pseudorhizobium flavum |
| 27 | 1808764 | 1809057 | - | NZ_HG965802.1 | Bartonella henselae |
| 28 | 3667556 | 3667855 | + | NZ_HG938353.1 | Neorhizobium galegae bv. orientalis str. HAMBI 540 |
| 29 | 3279287 | 3279583 | - | NZ_CP046052.1 | Methylocystis heyeri |
| 30 | 2909399 | 2909689 | + | NZ_CP015880.1 | Ensifer adhaerens |
| 31 | 3356328 | 3356627 | + | NZ_FO082820.1 | Pseudorhizobium banfieldiae |
| 32 | 1459784 | 1460074 | + | NZ_CP071454.1 | Rhizobium lentis |
| 33 | 2538301 | 2538600 | + | NZ_CP064063.1 | Brucella anthropi |
| 34 | 2379176 | 2379469 | + | NZ_CP022604.1 | [Ochrobactrum] quorumnocens |
| 35 | 1172253 | 1172543 | + | NZ_CP049241.1 | Rhizobium pseudoryzae |
| 36 | 859438 | 859728 | + | NZ_CP004393.1 | Celeribacter indicus |
| 37 | 3790546 | 3790836 | + | NZ_CP006877.1 | Rhizobium gallicum bv. gallicum R602sp |
| 38 | 87569 | 87865 | + | NC_008783.1 | Bartonella bacilliformis KC583 |
| 39 | 742446 | 742739 | + | NZ_LT605585.1 | Brucella inopinata |
| 40 | 2392095 | 2392391 | + | NZ_CP020330.1 | Martelella mediterranea DSM 17316 |
| 41 | 4105290 | 4105589 | + | NZ_CP013532.1 | Rhizobium phaseoli |
| 42 | 3570284 | 3570574 | + | NZ_CP041238.1 | Ensifer mexicanus |
| 43 | 4762110 | 4762406 | + | NZ_CP018171.1 | Mesorhizobium oceanicum |
| 44 | 4145723 | 4146013 | + | NZ_CP071604.1 | Rhizobium binae |
| 45 | 1939108 | 1939401 | - | NC_010103.1 | Brucella canis ATCC 23365 |
| 46 | 1940936 | 1941229 | - | NC_004310.3 | Brucella suis 1330 |
| 47 | 1949931 | 1950224 | - | NC_013119.1 | Brucella microti CCM 4915 |
| 48 | 52604 | 52897 | + | NC_003317.1 | Brucella melitensis bv. 1 str. 16M |
| 49 | 52846 | 53139 | + | NC_022905.1 | Brucella ceti TE10759-12 |
| 50 | 1954780 | 1955073 | - | NC_007618.1 | Brucella abortus 2308 |
| 51 | 2875013 | 2875303 | + | NC_020528.1 | Sinorhizobium meliloti 2011 |
| 52 | 3956124 | 3956420 | + | NZ_CP020906.1 | Rhizobium etli |
| 53 | 4131868 | 4132164 | + | NZ_CP013500.1 | Rhizobium esperanzae |
| 54 | 4022176 | 4022472 | + | NZ_CP071612.1 | Rhizobium bangladeshense |
| 55 | 2972653 | 2972943 | + | NZ_CP029451.1 | Sinorhizobium fredii CCBAU 25509 |
| 56 | 2611201 | 2611491 | + | NZ_CP023067.1 | Ensifer sojae CCBAU 05684 |
| 57 | 3326350 | 3326649 | + | NC_020059.1 | Rhizobium tropici CIAT 899 |
| 58 | 2615803 | 2616093 | + | NZ_CP034909.1 | Ensifer alkalisoli |
| 59 | 3041078 | 3041368 | + | NZ_CP013107.1 | Sinorhizobium americanum |
| 60 | 336395 | 336685 | + | NC_015259.1 | Polymorphum gilvum SL003B-26A1 |
| 61 | 3780782 | 3781081 | + | NZ_CP034998.1 | Rhizobium acidisoli |
| 62 | 4327172 | 4327474 | + | NZ_CP032509.1 | Georhizobium profundi |
| 63 | 168110 | 168400 | - | NZ_CP059896.1 | Ciceribacter thiooxidans |
| 64 | 1402853 | 1403143 | - | NZ_CP049250.1 | Rhizobium rhizoryzae |
| 65 | 383631 | 383930 | - | NZ_CP054027.1 | Rhizobium hidalgonense |
| 66 | 2046133 | 2046432 | - | NZ_CP019948.1 | Methylocystis bryophila |
| 67 | 2498003 | 2498293 | + | NZ_CP044331.1 | Methylocystis parvus |
| 68 | 2951224 | 2951514 | - | NZ_CP061498.1 | Roseicitreum antarcticum |
| 69 | 425228 | 425527 | - | NZ_CP017940.1 | Phyllobacterium zundukense |
| 70 | 1524543 | 1524833 | - | NZ_CP029553.1 | Methylobacterium terrae |
| 71 | 688254 | 688544 | + | NZ_CP053857.1 | Rhizobium pusense |
| 72 | 1945512 | 1945805 | - | NC_009505.1 | Brucella ovis ATCC 25840 |
| 73 | 1846023 | 1846313 | + | NC_009719.1 | Parvibaculum lavamentivorans DS-1 |
| 74 | 723413 | 723703 | + | NZ_CP012661.1 | Defluviimonas alba |
| 75 | 692661 | 692951 | + | NZ_CP048635.1 | Rhizobium oryzihabitans |
| 76 | 4569859 | 4570149 | + | NC_011894.1 | Methylobacterium nodulans ORS 2060 |
| 77 | 1783219 | 1783512 | - | NZ_CP019937.1 | Ketogulonicigenium robustum |
| 78 | 2231363 | 2231659 | - | NZ_CP012908.1 | Ketogulonicigenium vulgare |
| 79 | 3671724 | 3672029 | + | NZ_CP054836.1 | Oricola thermophila |
| 80 | 363602 | 363892 | - | NC_011666.1 | Methylocella silvestris BL2 |
| 81 | 4713490 | 4713786 | + | NZ_LT960614.1 | Hartmannibacter diazotrophicus |
| 82 | 3729014 | 3729301 | + | NZ_CP022196.1 | Celeribacter ethanolicus |
| 83 | 1947187 | 1947498 | + | NZ_CP072611.1 | Aureimonas populi |
| 84 | 746515 | 746805 | + | NZ_CP061004.1 | Agrobacterium tumefaciens |
| 85 | 566781 | 567071 | - | NZ_CP045423.1 | Microvirga thermotolerans |
| 86 | 161435 | 161731 | + | NZ_CP015318.1 | Mesorhizobium amorphae CCNWGS0123 |
| 87 | 2825288 | 2825572 | + | NZ_CP042304.1 | Devosia ginsengisoli |
| 88 | 31300 | 31590 | - | NZ_CP012946.1 | Blastochloris viridis |
| 89 | 2767725 | 2768000 | - | NC_022041.1 | Paracoccus aminophilus JCM 7686 |
| 90 | 1065935 | 1066222 | + | NZ_CP025086.1 | Methylovirgula ligni |
| 91 | 3809743 | 3810039 | + | NZ_CP025430.1 | Paracoccus zhejiangensis |
| 92 | 128624 | 128926 | + | NZ_CP025583.1 | Paracoccus jeotgali |
| 93 | 3131128 | 3131424 | - | NZ_CP054021.1 | Rhizobium indicum |
| 94 | 2736309 | 2736596 | - | NZ_CP040818.1 | Paraoceanicella profunda |
| 95 | 69419 | 69709 | + | NZ_CP071057.1 | Marinicauda algicola |
| 96 | 4596911 | 4597207 | + | NZ_CP071678.1 | Rhizobium ruizarguesonis |
| 97 | 588410 | 588700 | - | NZ_CP021404.1 | Pacificitalea manganoxidans |
| 98 | 130119 | 130406 | - | NZ_CP030918.1 | Paracoccus suum |
| 99 | 1600032 | 1600328 | - | NZ_CP033361.1 | Mesorhizobium erdmanii |
| 100 | 3888276 | 3888572 | + | NC_010581.1 | Beijerinckia indica subsp. indica ATCC 9039 |
| 101 | 3046610 | 3046900 | - | NZ_CP016616.1 | Microvirga ossetica |
| 102 | 793321 | 793617 | + | NC_011144.1 | Phenylobacterium zucineum HLK1 |
| 103 | 549491 | 549784 | + | NZ_CP040517.1 | Luteithermobacter gelatinilyticus |
| 104 | 1630252 | 1630548 | - | NC_019973.1 | Mesorhizobium australicum WSM2073 |
| 105 | 415354 | 415662 | - | NZ_CP042968.1 | Bradyrhizobium paxllaeri |
| 106 | 3677828 | 3678139 | - | NZ_CP044543.1 | Bradyrhizobium betae |
| 107 | 4764879 | 4765178 | - | NZ_CP042582.1 | Hypericibacter adhaerens |
| 108 | 1976066 | 1976377 | + | NZ_CP050066.1 | Bradyrhizobium symbiodeficiens |
| 109 | 1624188 | 1624484 | - | NC_015675.1 | Mesorhizobium opportunistum WSM2075 |
| 110 | 2864296 | 2864592 | + | NC_002678.2 | Mesorhizobium japonicum MAFF 303099 |
| 111 | 752640 | 752948 | - | NC_014664.1 | Rhodomicrobium vannielii ATCC 17100 |
| 112 | 1584819 | 1585115 | - | NZ_CP033507.1 | Mesorhizobium jarvisii |
| 113 | 2096946 | 2097242 | + | NZ_CP050296.1 | Mesorhizobium huakuii |
| 114 | 653041 | 653346 | - | NZ_CP030051.1 | Bradyrhizobium guangdongense |
| 115 | 372112 | 372420 | - | NZ_CP016428.1 | Bradyrhizobium icense |
| 116 | 665421 | 665732 | - | NC_017082.1 | Bradyrhizobium cosmicum |
| 117 | 1748615 | 1748920 | + | NZ_CP020612.1 | Paracoccus contaminans |
| 118 | 3084280 | 3084585 | + | NZ_CP039546.1 | Methylorubrum populi |
| 119 | 7951219 | 7951527 | + | NC_020453.1 | Bradyrhizobium oligotrophicum S58 |
| 120 | 534935 | 535240 | + | NZ_CP058907.1 | Rhodopseudomonas palustris |
| 121 | 4929089 | 4929388 | - | NZ_CP042906.1 | Hypericibacter terrae |
| 122 | 3176983 | 3177270 | + | NZ_CP061202.1 | Rhodobacter capsulatus |
| 123 | 315649 | 315960 | - | NZ_CP029426.1 | Bradyrhizobium amphicarpaeae |
| 124 | 1101205 | 1101492 | + | NZ_CP053562.1 | Thioclava electrotropha |
| 125 | 1321666 | 1321953 | + | NZ_CP019437.1 | Thioclava nitratireducens |
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