ProsmORF-pred
Result : C1DI68
Protein Information
Information Type Description
Protein name UPF0235 protein Avin_03050
NCBI Accession ID CP001157.1
Organism Azotobacter vinelandii (strain DJ / ATCC BAA-1303)
Left 285367
Right 285666
Strand -
Nucleotide Sequence ATGAGTTGGTACCGTTGGGACGGCGAGGACCTGATCCTCGCCTGCCACCTGCAGCCCAAGGCCAGCAAGGACGAATTCGCCGGGCTGCATGGCGAGCGCCTGAAGATCCGCCTCACCGCCCCGCCGGTGGAGGGCAAGGCCAACGCCCACCTGCTGGCCTTCCTCGCCGGCGTCTTCGGTGTGCCGAAGAGCCAGGTGAGCCTGGAAAGCGGCGAGTCGAACCGCCAGAAGCGGGTGCGCATCCGCCGGCCCCGGCAGCTTCCGGCGCTGCCCGGCCTGGCGCCGCGACCGGACGCCTGA
Sequence MSWYRWDGEDLILACHLQPKASKDEFAGLHGERLKIRLTAPPVEGKANAHLLAFLAGVFGVPKSQVSLESGESNRQKRVRIRRPRQLPALPGLAPRPDA
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl00811. Profile Description: Uncharacterized ACR, YggU family COG1872. hypothetical protein; Validated
Pubmed ID 19429624
Domain CDD:412584
Functional Category Others
Uniprot ID C1DI68
ORF Length (Amino Acid) 99
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Conservation Analysis
Conservation Analysis
No. of Species: 206
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 285367 285666 - NC_012560.1 Azotobacter vinelandii DJ
2 2420402 2420701 + NZ_CP045302.1 Azotobacter salinestris
3 4302640 4302939 + NZ_CP011835.1 Azotobacter chroococcum
4 293714 294010 - NZ_CP043311.1 Pseudomonas lalkuanensis
5 378342 378638 - NZ_AP022642.1 Pseudomonas otitidis
6 1695843 1696133 + NZ_CP070505.1 Pseudomonas toyotomiensis
7 277939 278235 - NZ_AP014862.1 Pseudomonas furukawaii
8 6443367 6443660 + NZ_LS999205.1 Pseudomonas protegens CHA0
9 341618 341914 - NZ_CP062158.2 Pseudomonas lundensis
10 503691 503981 - NZ_CP013124.1 Pseudomonas mendocina S5.2
11 993597 993896 - NZ_CP049044.1 Pseudomonas psychrophila
12 582232 582528 - NZ_CP014158.1 Pseudomonas citronellolis
13 487641 487937 - NZ_CP047698.1 Pseudomonas knackmussii
14 4818895 4819188 - NZ_CP012676.1 Pseudomonas versuta
15 811563 811853 - NZ_CP060009.1 Pseudomonas sediminis
16 4813943 4814233 + NZ_CP068551.1 Pseudomonas khazarica
17 6396868 6397161 + NZ_CP061079.1 Pseudomonas chlororaphis
18 148203 148493 + NZ_CP048833.1 Pseudomonas multiresinivorans
19 4611880 4612170 - NZ_CP048810.1 Pseudomonas bijieensis
20 6345598 6345891 + NZ_CP034725.1 Pseudomonas brassicacearum
21 5915040 5915330 + NZ_CP029608.1 Pseudomonas kribbensis
22 6132347 6132637 + NZ_CP062253.1 Pseudomonas gozinkensis
23 6132354 6132644 + NZ_CP062252.1 Pseudomonas allokribbensis
24 4332019 4332315 - NZ_CP005960.1 Pseudomonas mandelii JR-1
25 484006 484302 - NZ_LR215729.2 Pseudomonas marincola
26 2789868 2790155 - NZ_CP014205.2 Pseudomonas glycinae
27 272159 272452 - NZ_AP014545.1 Amphritea japonica ATCC BAA-1530
28 3703816 3704127 + NC_020888.1 Thalassolituus oleivorans MIL-1
29 3017368 3017661 - NZ_CP022684.1 Ketobacter alkanivorans
30 851801 852109 - NZ_CP007142.1 Gynuella sunshinyii YC6258
31 29310 29603 + NZ_AP018724.1 Sulfurivermis fontis
32 2505115 2505405 + NZ_AP014879.1 Sulfuricaulis limicola
33 2160162 2160404 + NZ_CP011412.1 Sedimenticola thiotaurini
34 308827 309093 + NZ_AP017928.1 Methylocaldum marinum
35 290158 290406 - NZ_AP018725.1 Sulfuriflexus mobilis
36 3393341 3393649 - NC_007484.1 Nitrosococcus oceani ATCC 19707
37 4000112 4000399 + NZ_CP012373.2 Beggiatoa leptomitoformis
38 814561 814863 - NC_019940.1 Thioflavicoccus mobilis 8321
39 1810246 1810527 + NZ_CP012362.1 Oblitimonas alkaliphila
40 3910036 3910344 + NC_013960.1 Nitrosococcus halophilus Nc 4
41 686337 686648 + NZ_CP038033.1 Nitrosococcus wardiae
42 935366 935656 - NC_013456.1 Vibrio antiquarius
43 3904577 3904876 + NZ_CP014544.1 Zhongshania aliphaticivorans
44 135436 135681 + NC_010995.1 Cellvibrio japonicus Ueda107
45 2761334 2761624 - NZ_CP025792.1 Vibrio jasicida 090810c
46 3243631 3243939 - NC_014315.1 Nitrosococcus watsonii C-113
47 509716 510006 - NZ_CP031781.1 Vibrio parahaemolyticus
48 484266 484556 - NZ_CP032093.1 Vibrio alfacsensis
49 303746 304036 - NZ_CP018312.1 Vibrio rotiferianus
50 2339292 2339582 - NZ_CP019959.1 Vibrio owensii
51 328888 329139 + NZ_CP072793.1 Thiothrix unzii
52 163277 163567 - NZ_CP009977.1 Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
53 2591104 2591391 + NZ_CP020373.1 Shewanella khirikhana
54 2982473 2982760 + NC_008700.1 Shewanella amazonensis SB2B
55 2741096 2741386 + NZ_CP030788.1 Vibrio campbellii
56 3540814 3541101 + NZ_CP046378.1 Shewanella algae
57 941488 941775 + NZ_CP042941.1 Atlantibacter hermannii
58 359215 359505 - NZ_CP022741.1 Vibrio qinghaiensis
59 341352 341642 - NZ_CP009354.1 Vibrio tubiashii ATCC 19109
60 3300192 3300446 + NZ_CP009467.1 Vibrio harveyi
61 4033280 4033567 + NZ_CP004387.1 Alcanivorax pacificus W11-5
62 782305 782580 - NZ_CP070624.1 Photobacterium damselae subsp. damselae
63 712244 712540 - NZ_CP034752.1 Jinshanibacter zhutongyuii
64 35804 36094 - NZ_AP019657.1 Vibrio ponticus
65 727978 728265 - NZ_CP054058.1 Scandinavium goeteborgense
66 1045036 1045326 - NC_012691.1 Tolumonas auensis DSM 9187
67 2942091 2942378 + NZ_CP069213.1 Shewanella litorisediminis
68 484150 484452 + NZ_CP050150.1 Hafnia alvei
69 2627815 2628069 + NZ_CP016414.1 Vibrio scophthalmi
70 341148 341393 - NZ_CP016605.1 Bisgaardia hudsonensis
71 2896483 2896773 + NZ_CP044069.1 Vibrio vulnificus
72 476540 476857 + NZ_LR134510.1 Actinobacillus delphinicola
73 684655 684951 - NZ_CP029185.2 Limnobaculum parvum
74 3164547 3164843 + NZ_CP046268.1 Vibrio spartinae
75 25429 25707 + NZ_CP020388.1 Pluralibacter gergoviae
76 715477 715770 + NZ_LS483443.1 Aggregatibacter segnis ATCC 33393
77 3790911 3791201 + NZ_CP012871.1 [Enterobacter] lignolyticus
78 2912629 2912919 + NZ_CP040449.1 Aeromonas simiae
79 2873667 2873957 + NC_011753.2 Vibrio atlanticus
80 806339 806596 - NZ_CP005974.1 Photobacterium gaetbulicola Gung47
81 818899 819162 - NZ_CP006569.1 Sodalis praecaptivus
82 1389622 1389912 + NZ_CP023706.1 Edwardsiella tarda
83 3420395 3420685 + NZ_CP016043.1 Edwardsiella hoshinae
84 286404 286694 - NC_012779.2 Edwardsiella ictaluri 93-146
85 2624659 2624949 + NZ_AP019651.1 Vibrio taketomensis
86 795489 795779 - NZ_CP050508.1 Raoultella terrigena
87 1893606 1893896 - NZ_CP065150.1 Vibrio kanaloae
88 365888 366178 - NZ_AP014524.1 Vibrio cholerae MS6
89 749107 749397 - NZ_CP041247.1 Raoultella electrica
90 894232 894522 + NZ_CP026047.1 Raoultella planticola
91 800648 800938 - NZ_CP046672.1 Raoultella ornithinolytica
92 268065 268358 - NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H
93 2049435 2049725 - NZ_CP006664.1 Edwardsiella anguillarum ET080813
94 119322 119615 - NZ_CP035688.1 Vibrio metoecus
95 2609641 2609898 + NZ_CP067057.1 Rahnella aceris
96 3315679 3315933 + NC_014541.1 Ferrimonas balearica DSM 9799
97 910534 910824 - NZ_CP036175.1 Klebsiella huaxiensis
98 419874 420164 - NZ_CP039700.1 Vibrio cyclitrophicus
99 828987 829277 - NZ_CP060111.1 Klebsiella michiganensis
100 763128 763433 + NZ_CP014056.2 Grimontia hollisae
101 3272243 3272545 - NC_013851.1 Allochromatium vinosum DSM 180
102 3794318 3794608 + NZ_CP038498.1 Pectobacterium punjabense
103 4125603 4125902 - NZ_CP050851.1 Aeromonas hydrophila
104 3044210 3044467 + NZ_CP034035.1 Brenneria rubrifaciens
105 3369917 3370165 + NZ_CP022358.1 Shewanella bicestrii
106 764699 764989 - NZ_CP054254.1 Klebsiella variicola
107 1870938 1871195 + NZ_CP009781.1 Yersinia aldovae 670-83
108 1413092 1413391 - NZ_CP011451.1 Nitrosomonas communis
109 2551876 2552118 - NZ_CP058952.1 Chitinibacter fontanus
110 2378520 2378825 - NZ_CP039268.1 Thermochromatium tepidum ATCC 43061
111 458038 458283 - NZ_CP071325.1 Photobacterium ganghwense
112 4471676 4471948 + NZ_CP048784.1 Serratia liquefaciens
113 4491393 4491683 + NC_016845.1 Klebsiella pneumoniae subsp. pneumoniae HS11286
114 24104 24394 - NZ_CP011602.1 Phytobacter ursingii
115 219742 220014 + NZ_CP054043.1 Yersinia mollaretii ATCC 43969
116 830740 831036 - NZ_CP013990.1 Leclercia adecarboxylata
117 8806715 8806975 + NZ_CP017641.1 Fuerstia marisgermanicae
118 743907 744197 - NZ_CP065838.1 Klebsiella quasipneumoniae
119 1914455 1914742 - NZ_CP040863.1 Rodentibacter heylii
120 1021334 1021621 - NZ_LT906463.1 Haemophilus pittmaniae
121 1951565 1951861 + NZ_AP018689.1 Vibrio aphrogenes
122 807643 807933 - NZ_CP014007.2 Kosakonia oryzae
123 5284384 5284674 - NC_013716.1 Citrobacter rodentium ICC168
124 733620 733874 - NZ_CP046293.1 Yersinia intermedia
125 3742285 3742542 + NC_008709.1 Psychromonas ingrahamii 37
126 896534 896824 - NZ_CP040990.1 Vibrio furnissii
127 4421238 4421513 + NZ_CP038662.1 Serratia nematodiphila
128 4535361 4535633 + NC_015567.1 Serratia plymuthica AS9
129 1682556 1682843 - NC_010506.1 Shewanella woodyi ATCC 51908
130 4158482 4158736 + NZ_CP051883.1 Aeromonas salmonicida
131 4064631 4064933 - NZ_CP065745.1 Aeromonas allosaccharophila
132 577065 577322 - NZ_CP013940.1 Cronobacter malonaticus LMG 23826
133 4382997 4383251 + NZ_CP015113.1 Kosakonia radicincitans
134 4076881 4077135 + NZ_CP063425.1 Kosakonia pseudosacchari
135 3706868 3707140 + NZ_CP016948.1 Serratia surfactantfaciens
136 4139394 4139651 - NZ_CP027107.1 Cronobacter sakazakii
137 3507402 3507659 + NZ_CP012257.1 Cronobacter universalis NCTC 9529
138 3923834 3924088 - NZ_CP016337.1 Kosakonia sacchari
139 47112 47402 - NZ_CP014137.1 Brenneria goodwinii
140 1366730 1367023 + NZ_CP046793.1 Vibrio metschnikovii
141 3815184 3815486 - NZ_CP044060.1 Aeromonas veronii
142 2718732 2719028 - NZ_CP010554.1 Rugosibacter aromaticivorans
143 2166887 2167177 - NZ_LT556085.1 Citrobacter amalonaticus
144 3496028 3496318 - NZ_CP014136.1 Gibbsiella quercinecans
145 1699129 1699395 + NZ_LT906448.1 Pasteurella dagmatis
146 3772421 3772693 + NZ_CP032487.1 Yersinia hibernica
147 4404158 4404430 + NZ_LT906479.1 Serratia ficaria
148 3583162 3583416 + NZ_CP012264.1 Cronobacter condimenti 1330
149 3893434 3893730 + NZ_CP027986.1 Enterobacter sichuanensis
150 699649 699921 - NZ_CP071320.1 Serratia ureilytica
151 812366 812638 - NZ_CP011118.1 Yersinia enterocolitica
152 4010712 4011002 + NC_009792.1 Citrobacter koseri ATCC BAA-895
153 3785845 3786117 + NZ_CP043727.1 Yersinia canariae
154 1148407 1148664 + NZ_CP015137.1 Dickeya solani IPO 2222
155 429543 429803 - NZ_CP012268.1 Cronobacter muytjensii ATCC 51329
156 3706161 3706415 + NZ_CP012266.1 Cronobacter dublinensis subsp. dublinensis LMG 23823
157 3888325 3888609 - NZ_CP016210.1 Azoarcus olearius
158 3894956 3895252 + NC_015968.1 Enterobacter soli
159 2017513 2017785 + NZ_CP009787.1 Yersinia rohdei
160 872135 872392 - NC_012912.1 Dickeya chrysanthemi Ech1591
161 568133 568399 - NZ_LR134201.1 Cedecea lapagei
162 877645 877902 - NZ_CP034036.1 Brenneria nigrifluens DSM 30175 = ATCC 13028
163 3784030 3784320 + NZ_CP025799.1 Dickeya zeae
164 1933825 1934097 - NZ_CP007044.2 Chania multitudinisentens RB-25
165 819035 819292 - NZ_CP042220.2 Dickeya poaceiphila
166 3782862 3783119 - NZ_CP009460.1 Dickeya fangzhongdai
167 1169465 1169794 + NZ_CP012371.1 Nitrosospira briensis C-128
168 2653710 2654003 + NZ_CP059467.1 Aromatoleum bremense
169 4472699 4472971 + NZ_LR134494.1 Serratia quinivorans
170 3940779 3941036 + NC_014500.1 Dickeya dadantii 3937
171 713231 713488 + NZ_CP011254.1 Serratia fonticola
172 1306674 1306919 - NZ_CP041730.1 Chitinimonas arctica
173 262465 262713 - NZ_AP018738.1 Ferriphaselus amnicola
174 595924 596172 + NZ_LR134376.1 Aeromonas encheleia
175 1030084 1030377 - NC_006513.1 Aromatoleum aromaticum EbN1
176 4203758 4204048 - NZ_CP038469.1 Citrobacter tructae
177 624334 624624 + NZ_CP065640.1 Serratia rubidaea
178 299623 299910 + NC_006300.1 [Mannheimia] succiniciproducens MBEL55E
179 3290020 3290271 - NZ_CP022579.1 Oryzomicrobium terrae
180 3633841 3634131 - NZ_CP007031.1 Marichromatium purpuratum 984
181 1362771 1363043 - NC_009901.1 Shewanella pealeana ATCC 700345
182 3096383 3096673 + NC_000913.3 Escherichia coli str. K-12 substr. MG1655
183 1780427 1780741 + NZ_CP021376.1 Oceanisphaera avium
184 1422834 1423106 - NC_010334.1 Shewanella halifaxensis HAW-EB4
185 769173 769427 + NZ_CP028926.1 Pasteurella multocida
186 2172533 2172820 + NZ_CP015031.1 Basfia succiniciproducens
187 296228 296482 - NZ_LR134167.1 Avibacterium volantium
188 2146442 2146693 - NZ_CP018804.1 Histophilus somni
189 3373571 3373867 - NZ_CP025034.2 Enterobacter sp. SGAir0187
190 864753 865040 - NZ_LS483458.1 Haemophilus haemolyticus
191 680353 680643 - NZ_AP018685.1 Vibrio rumoiensis
192 551041 551304 - NZ_CP023525.1 Cedecea neteri
193 351502 351789 + NZ_CP006954.1 Bibersteinia trehalosi USDA-ARS-USMARC-188
194 1237599 1237856 - NZ_CP041036.1 Shewanella polaris
195 1146769 1147020 + NZ_CP021377.1 Oceanisphaera profunda
196 1557435 1557695 - NZ_CP020472.1 Shewanella japonica
197 476016 476318 - NZ_CP012621.1 Zobellella denitrificans
198 540401 540646 - NZ_CP028897.1 Dongshaea marina
199 1213795 1214082 - NC_014012.1 Shewanella violacea DSS12
200 1140591 1140908 - NZ_CP021106.3 Nitrosospira lacus
201 41300 41608 - NZ_AP022853.1 Sulfurimicrobium lacus
202 2773664 2773954 + NZ_CP015519.1 Syntrophotalea acetylenivorans
203 501381 501683 + NZ_CP064781.1 Azospira restricta
204 4962577 4962885 + NC_008554.1 Syntrophobacter fumaroxidans MPOB
205 4012051 4012296 + NZ_CP043473.1 Chromobacterium paludis
206 360614 360859 + NZ_AP019312.1 Chromobacterium haemolyticum
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NC_012560.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF04055.23 0.66 135 672 same-strand Radical SAM superfamily
2 PF06969.18 0.65 134 670.0 same-strand HemN C-terminal domain
3 PF01725.18 0.73 151 471 same-strand Ham1 family
4 PF02325.19 0.98 201 6 same-strand YGGT family
5 PF14748.8 0.71 147 610 same-strand Pyrroline-5-carboxylate reductase dimerisation
6 PF03807.19 0.71 146 610.0 same-strand NADP oxidoreductase coenzyme F420-dependent
7 PF01168.22 0.86 178 1470.5 same-strand Alanine racemase, N-terminal domain
8 PF00437.22 0.74 152 2281 opposite-strand Type II/IV secretion system protein
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