Result : C0ZB21
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 30S ribosomal protein S20 |
| NCBI Accession ID | AP008955.1 |
| Organism | Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) |
| Left | 2089064 |
| Right | 2089339 |
| Strand | - |
| Nucleotide Sequence | ATGCCAAACATTAAATCCGCGATTAAACGCACCAAAACAATCGAAAAGCGTCGCGCACACCGCGCTTCTCAAAAGTCTGATCTGCGTACTTCCATCAAGAACTTTGAGAAAGCTGTCGCTGCTTCCGATGTAGCATTGGCGAAATCTACTCTTCTGGTGGCTGTGAAAAAGCTGGACAAGGCCGCTTCGAAAGGTCTCATTCATAAAAACGCAGCAAACCGTCAAAAGTCTCGTTTGATGAAAAAGCTTAACGTTCTGAGCGCTCCTGTAGCGTAA |
| Sequence | MPNIKSAIKRTKTIEKRRAHRASQKSDLRTSIKNFEKAVAASDVALAKSTLLVAVKKLDKAASKGLIHKNAANRQKSRLMKKLNVLSAPVA |
| Source of smORF | Swiss-Prot |
| Function | Binds directly to 16S ribosomal RNA. {ECO:0000255|HAMAP-Rule:MF_00500}. |
| Pubmed ID | |
| Domain | CDD:412349 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | C0ZB21 |
| ORF Length (Amino Acid) | 91 |
++ More..
| Conservation Analysis |
No. of Species: 417
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3871483 | 3871758 | + | NZ_CP026363.1 | Brevibacillus agri |
| 2 | 4115128 | 4115403 | + | NZ_LR134338.1 | Brevibacillus brevis |
| 3 | 3684065 | 3684340 | - | NZ_CP017705.1 | Brevibacillus laterosporus DSM 25 |
| 4 | 1314639 | 1314905 | - | NZ_AP017312.1 | Aneurinibacillus soli |
| 5 | 1734855 | 1735127 | + | NZ_CP035492.1 | Paenibacillus protaetiae |
| 6 | 4242136 | 4242408 | - | NZ_CP011058.1 | Paenibacillus beijingensis |
| 7 | 2337478 | 2337750 | - | NZ_CP048209.1 | Paenibacillus lycopersici |
| 8 | 766971 | 767243 | - | NZ_CP033433.1 | Cohnella candidum |
| 9 | 1320667 | 1320939 | + | NZ_CP048286.1 | Paenibacillus rhizovicinus |
| 10 | 90688 | 90954 | + | NZ_CP063356.1 | Anaerobacillus isosaccharinicus |
| 11 | 2949305 | 2949577 | + | NZ_CP019659.1 | Paenibacillus larvae subsp. larvae |
| 12 | 2844367 | 2844639 | - | NZ_CP034437.1 | Paenibacillus albus |
| 13 | 2890825 | 2891097 | + | NZ_AP019308.1 | Paenibacillus baekrokdamisoli |
| 14 | 6751188 | 6751460 | + | NC_017672.3 | Paenibacillus mucilaginosus K02 |
| 15 | 1773073 | 1773339 | - | NC_014829.1 | Evansella cellulosilytica DSM 2522 |
| 16 | 1974129 | 1974395 | + | NZ_CP012152.1 | Anoxybacillus gonensis |
| 17 | 5154317 | 5154589 | + | NZ_CP026520.1 | Paenibacillus chitinolyticus |
| 18 | 747599 | 747868 | - | NZ_CP014342.1 | Geobacillus subterraneus |
| 19 | 2532216 | 2532485 | + | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 20 | 1733055 | 1733324 | + | NZ_CP061470.1 | Geobacillus zalihae |
| 21 | 1404000 | 1404269 | - | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 22 | 3405030 | 3405299 | - | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 23 | 902348 | 902620 | - | NZ_CP013652.1 | Paenibacillus naphthalenovorans |
| 24 | 4332809 | 4333075 | + | NZ_CP024035.1 | Priestia aryabhattai |
| 25 | 2586172 | 2586438 | + | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 26 | 1085717 | 1085983 | - | NC_013791.2 | Alkalihalobacillus pseudofirmus OF4 |
| 27 | 2865308 | 2865580 | - | NZ_CP034235.1 | Paenibacillus psychroresistens |
| 28 | 2149612 | 2149878 | + | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 29 | 3870304 | 3870576 | + | NZ_CP004078.1 | Paenibacillus sabinae T27 |
| 30 | 4501134 | 4501406 | + | NZ_CP009288.1 | Paenibacillus durus |
| 31 | 3454838 | 3455107 | + | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 32 | 5305178 | 5305450 | + | NZ_CP021780.1 | Paenibacillus donghaensis |
| 33 | 2791442 | 2791708 | + | NZ_CP015378.1 | Fictibacillus phosphorivorans |
| 34 | 4179713 | 4179985 | + | NZ_CP009286.1 | Paenibacillus stellifer |
| 35 | 1423793 | 1424068 | - | NC_002570.2 | Alkalihalobacillus halodurans C-125 |
| 36 | 5297975 | 5298247 | + | NZ_CP009428.1 | Paenibacillus odorifer |
| 37 | 6276105 | 6276377 | + | NZ_CP009285.1 | Paenibacillus borealis |
| 38 | 4035097 | 4035363 | - | NZ_CP068053.1 | Peribacillus psychrosaccharolyticus |
| 39 | 284235 | 284507 | + | NZ_CP048429.1 | Paenibacillus jilunlii |
| 40 | 5548366 | 5548638 | + | NZ_CP009287.1 | Paenibacillus graminis |
| 41 | 260500 | 260772 | + | NZ_CP068595.1 | Paenibacillus sonchi |
| 42 | 6082503 | 6082775 | + | NZ_LN831776.1 | Paenibacillus riograndensis SBR5 |
| 43 | 1845735 | 1846007 | + | NZ_CP054614.1 | Paenibacillus barcinonensis |
| 44 | 3141566 | 3141832 | + | NZ_CP018866.1 | Sutcliffiella cohnii |
| 45 | 751066 | 751332 | + | NZ_CP030926.1 | Peribacillus butanolivorans |
| 46 | 4408964 | 4409230 | - | NZ_CP017704.1 | Peribacillus simplex NBRC 15720 = DSM 1321 |
| 47 | 4717399 | 4717671 | + | NZ_CP043611.1 | Paenibacillus antarcticus |
| 48 | 1594864 | 1595127 | - | NZ_CP065425.1 | Heyndrickxia vini |
| 49 | 1425834 | 1426103 | - | NZ_CP070511.1 | Parageobacillus toebii |
| 50 | 1122490 | 1122750 | + | NZ_CP019699.1 | Novibacillus thermophilus |
| 51 | 4311547 | 4311819 | + | NZ_CP013023.1 | Paenibacillus bovis |
| 52 | 466916 | 467188 | + | NZ_CP045298.1 | Paenibacillus brasilensis |
| 53 | 1855223 | 1855495 | - | NZ_CP020028.1 | Paenibacillus kribbensis |
| 54 | 2560201 | 2560467 | + | NZ_CP048103.1 | Kroppenstedtia eburnea |
| 55 | 3297144 | 3297416 | - | NZ_CP011388.1 | Paenibacillus swuensis |
| 56 | 3827086 | 3827352 | + | NZ_CP017703.1 | Aeribacillus pallidus |
| 57 | 2545967 | 2546233 | + | NZ_CP023704.1 | Caldibacillus thermoamylovorans |
| 58 | 687235 | 687507 | - | NZ_CP045293.1 | Paenibacillus guangzhouensis |
| 59 | 789737 | 790012 | + | NZ_CP041217.1 | Saccharibacillus brassicae |
| 60 | 2432429 | 2432695 | + | NZ_CP051464.1 | Bacillus mojavensis |
| 61 | 3621827 | 3622093 | - | NZ_CP029364.1 | Bacillus halotolerans |
| 62 | 3091974 | 3092231 | + | NZ_CP024109.1 | Bacillus cytotoxicus |
| 63 | 2547825 | 2548097 | + | NZ_CP014167.1 | Paenibacillus yonginensis |
| 64 | 1416959 | 1417225 | - | NZ_CP011937.1 | Bacillus velezensis |
| 65 | 2582718 | 2582984 | + | NZ_CP053376.1 | Bacillus amyloliquefaciens |
| 66 | 2509239 | 2509505 | + | NZ_CP034943.1 | Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 |
| 67 | 1985983 | 1986255 | - | NZ_CP034346.1 | Paenibacillus lutimineralis |
| 68 | 1538873 | 1539145 | + | NZ_CP045295.1 | Paenibacillus cellulositrophicus |
| 69 | 5575305 | 5575577 | + | NC_016641.1 | Paenibacillus terrae HPL-003 |
| 70 | 4306676 | 4306933 | + | NC_011725.1 | Bacillus cereus B4264 |
| 71 | 2507910 | 2508176 | + | NZ_CP048852.1 | Bacillus tequilensis |
| 72 | 2494801 | 2495067 | + | NZ_CP013984.1 | Bacillus inaquosorum |
| 73 | 2635815 | 2636081 | + | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 74 | 1061761 | 1062018 | - | NZ_CP040336.1 | Bacillus luti |
| 75 | 4136729 | 4136986 | + | NC_007530.2 | Bacillus anthracis str. 'Ames Ancestor' |
| 76 | 4172249 | 4172506 | + | NZ_CP064875.1 | Bacillus toyonensis |
| 77 | 4630322 | 4630594 | + | NZ_AP019400.1 | Cohnella abietis |
| 78 | 2035281 | 2035547 | + | NZ_AP021853.1 | Sporolactobacillus terrae |
| 79 | 2317545 | 2317811 | + | NZ_CP029797.1 | Paraliobacillus zengyii |
| 80 | 3482276 | 3482542 | + | NZ_CP053989.1 | Niallia circulans |
| 81 | 4345747 | 4346004 | + | NZ_CP032365.1 | Bacillus wiedmannii |
| 82 | 784388 | 784648 | + | NZ_CP009709.1 | Weizmannia coagulans DSM 1 = ATCC 7050 |
| 83 | 2604174 | 2604440 | + | NZ_CP033052.1 | Bacillus vallismortis |
| 84 | 2258069 | 2258335 | + | NZ_CP024848.1 | Oceanobacillus zhaokaii |
| 85 | 2067748 | 2068014 | + | NZ_CP041666.1 | Radiobacillus deserti |
| 86 | 2005105 | 2005365 | + | NC_004193.1 | Oceanobacillus iheyensis HTE831 |
| 87 | 2079575 | 2079829 | + | NZ_CP009416.1 | Jeotgalibacillus malaysiensis |
| 88 | 2363709 | 2363975 | + | NZ_CP048104.1 | Kroppenstedtia pulmonis |
| 89 | 3044882 | 3045148 | - | NZ_CP017786.1 | Bacillus xiamenensis |
| 90 | 1284450 | 1284716 | - | NZ_CP016020.1 | Bacillus weihaiensis |
| 91 | 2330327 | 2330593 | + | NZ_CP011150.1 | Bacillus altitudinis |
| 92 | 2418421 | 2418687 | - | NC_010337.2 | Heliomicrobium modesticaldum Ice1 |
| 93 | 3383131 | 3383397 | + | NC_022524.1 | Bacillus infantis NRRL B-14911 |
| 94 | 983759 | 984022 | - | NZ_CP039710.1 | Thermoactinomyces vulgaris |
| 95 | 1807504 | 1807770 | + | NZ_CP008876.1 | Terribacillus goriensis |
| 96 | 2724750 | 2725013 | + | NZ_CP053187.1 | Turicibacter sanguinis |
| 97 | 1733744 | 1734013 | + | NZ_CP045875.1 | Heliorestis convoluta |
| 98 | 3418501 | 3418767 | + | NZ_CP022657.1 | Tumebacillus algifaecis |
| 99 | 1437190 | 1437444 | + | NZ_LR134483.1 | Listeria grayi |
| 100 | 2956558 | 2956824 | - | NZ_CP043404.1 | Bacillus safensis |
| 101 | 1370820 | 1371092 | + | NZ_CP016809.1 | Paenibacillus ihbetae |
| 102 | 1827888 | 1828157 | + | NZ_CP034118.1 | Staphylospora marina |
| 103 | 1316399 | 1316665 | - | NZ_CP012502.1 | Bacillus beveridgei |
| 104 | 1662079 | 1662342 | - | NZ_LS483476.1 | Lederbergia lentus |
| 105 | 1901529 | 1901789 | - | NZ_CP020772.1 | Halobacillus mangrovi |
| 106 | 1141566 | 1141832 | - | NC_018704.1 | Amphibacillus xylanus NBRC 15112 |
| 107 | 2298769 | 2299029 | + | NZ_CP012024.1 | Bacillus smithii |
| 108 | 979041 | 979307 | - | NC_006085.1 | Cutibacterium acnes KPA171202 |
| 109 | 1894866 | 1895120 | + | NZ_CP011102.1 | Listeria weihenstephanensis |
| 110 | 2868749 | 2869015 | - | NZ_CP022315.1 | Virgibacillus phasianinus |
| 111 | 2939750 | 2940016 | - | NZ_CP021434.1 | Tumebacillus avium |
| 112 | 1959045 | 1959311 | - | NZ_CP022437.1 | Virgibacillus necropolis |
| 113 | 1641239 | 1641505 | - | NZ_CP017962.1 | Virgibacillus halodenitrificans |
| 114 | 2728512 | 2728784 | - | NZ_CP034248.1 | Paenibacillus lentus |
| 115 | 1790410 | 1790664 | - | NZ_CP016843.1 | Carnobacterium divergens |
| 116 | 1426491 | 1426745 | + | NC_013891.1 | Listeria seeligeri serovar 1/2b str. SLCC3954 |
| 117 | 1449075 | 1449341 | + | NC_021064.1 | Cutibacterium avidum 44067 |
| 118 | 2509827 | 2510102 | + | NC_019897.1 | Thermobacillus composti KWC4 |
| 119 | 3447627 | 3447890 | - | NZ_CP022983.1 | Cytobacillus kochii |
| 120 | 3257594 | 3257860 | + | NC_014624.2 | Eubacterium callanderi |
| 121 | 4112589 | 4112855 | - | NZ_CP029487.1 | Eubacterium maltosivorans |
| 122 | 2904341 | 2904607 | + | NZ_CP040635.1 | Acidipropionibacterium jensenii |
| 123 | 2545010 | 2545270 | + | NC_017668.1 | Halobacillus halophilus DSM 2266 |
| 124 | 1740462 | 1740725 | + | NZ_AP018437.1 | Pelolinea submarina |
| 125 | 1723165 | 1723431 | + | NC_008593.1 | Clostridium novyi NT |
| 126 | 3428550 | 3428816 | - | NZ_CP018622.1 | Virgibacillus dokdonensis |
| 127 | 1925137 | 1925403 | - | NZ_CP019962.1 | Eubacterium limosum |
| 128 | 1607426 | 1607680 | - | NC_020207.1 | Enterococcus faecium ATCC 8459 = NRRL B-2354 |
| 129 | 1581374 | 1581628 | + | NZ_CP065211.1 | Enterococcus lactis |
| 130 | 2683830 | 2684102 | + | NZ_CP059066.1 | Koleobacter methoxysyntrophicus |
| 131 | 2335015 | 2335281 | + | NZ_CP032416.1 | Clostridium fermenticellae |
| 132 | 1409967 | 1410218 | - | NZ_CP016543.2 | Planococcus donghaensis |
| 133 | 2918667 | 2918933 | + | NZ_LT603683.1 | Bacillus glycinifermentans |
| 134 | 1625188 | 1625442 | + | NZ_CP023074.1 | Enterococcus thailandicus |
| 135 | 1548001 | 1548255 | + | NZ_CP009577.1 | Listeria ivanovii subsp. ivanovii |
| 136 | 1513917 | 1514171 | + | NC_003210.1 | Listeria monocytogenes EGD-e |
| 137 | 1561092 | 1561340 | - | NZ_CP010820.1 | Lysinibacillus fusiformis |
| 138 | 1153183 | 1153437 | - | NZ_CP018061.1 | Enterococcus mundtii |
| 139 | 2254874 | 2255128 | + | NZ_CP023011.2 | Enterococcus hirae |
| 140 | 1494849 | 1495097 | - | NZ_CP016539.2 | Planococcus plakortidis |
| 141 | 1458621 | 1458869 | - | NZ_CP016538.2 | Planococcus maritimus |
| 142 | 1468627 | 1468875 | - | NZ_CP059540.1 | Planococcus maritimus |
| 143 | 2432230 | 2432484 | - | NZ_CP034465.1 | Jeotgalibaca ciconiae |
| 144 | 1464852 | 1465103 | - | NZ_CP016537.2 | Planococcus halocryophilus |
| 145 | 264755 | 265015 | - | NZ_CP039712.1 | Vagococcus zengguangii |
| 146 | 5244179 | 5244445 | - | NZ_CP011803.1 | Clostridium carboxidivorans P7 |
| 147 | 1491010 | 1491264 | + | NZ_LT906444.1 | Listeria welshimeri |
| 148 | 472908 | 473174 | - | NZ_CP020953.1 | Clostridium drakei |
| 149 | 3774083 | 3774349 | + | NZ_CP009933.1 | Clostridium scatologenes |
| 150 | 955818 | 956084 | + | NZ_CP044427.1 | Ornithinimicrobium pratense |
| 151 | 1519501 | 1519761 | + | NZ_CP066802.1 | Actinomyces weissii |
| 152 | 112396 | 112662 | - | NZ_CP019400.1 | Acidipropionibacterium acidipropionici |
| 153 | 2055295 | 2055549 | - | NZ_CP023643.1 | Brochothrix thermosphacta |
| 154 | 2658258 | 2658521 | + | NZ_CP019698.1 | Desulfotomaculum ferrireducens |
| 155 | 2865119 | 2865373 | + | NZ_CP049887.1 | Vagococcus hydrophili |
| 156 | 1211730 | 1211978 | - | NZ_CP013659.2 | Planococcus rifietoensis |
| 157 | 4134012 | 4134290 | + | NZ_CP060009.1 | Pseudomonas sediminis |
| 158 | 3962818 | 3963096 | + | NZ_CP013124.1 | Pseudomonas mendocina S5.2 |
| 159 | 3440475 | 3440753 | - | NZ_CP070505.1 | Pseudomonas toyotomiensis |
| 160 | 1096640 | 1096918 | - | NZ_CP068551.1 | Pseudomonas khazarica |
| 161 | 879717 | 879980 | - | NZ_CP017253.2 | Clostridium taeniosporum |
| 162 | 1586759 | 1587031 | + | NZ_CP016379.1 | Anoxybacter fermentans |
| 163 | 2147980 | 2148246 | + | NC_018870.1 | Thermacetogenium phaeum DSM 12270 |
| 164 | 1261345 | 1261599 | + | NZ_LS483306.1 | Enterococcus cecorum |
| 165 | 277452 | 277700 | + | NZ_CP013661.2 | Planococcus kocurii |
| 166 | 1505418 | 1505666 | - | NZ_CP019401.1 | Planococcus faecalis |
| 167 | 1192876 | 1193136 | + | NZ_LR134357.1 | Actinomyces israelii |
| 168 | 3692896 | 3693168 | + | NC_018017.1 | Desulfitobacterium dehalogenans ATCC 51507 |
| 169 | 1084212 | 1084478 | - | NZ_CP014989.1 | Serinicoccus hydrothermalis |
| 170 | 531603 | 531857 | - | NZ_CP019728.1 | Jeotgalibaca dankookensis |
| 171 | 857682 | 857933 | - | NZ_CP029544.1 | Lactobacillus helsingborgensis |
| 172 | 1938494 | 1938748 | + | NC_020995.1 | Enterococcus casseliflavus EC20 |
| 173 | 826296 | 826550 | + | NZ_CP021874.1 | Enterococcus wangshanyuanii |
| 174 | 1583955 | 1584203 | - | NZ_CP016534.2 | Planococcus antarcticus DSM 14505 |
| 175 | 4498779 | 4499039 | - | NZ_AP022568.1 | Mycobacterium simiae |
| 176 | 5743428 | 5743706 | + | NZ_CP035088.1 | Pseudomonas viciae |
| 177 | 5805019 | 5805297 | + | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 178 | 5702621 | 5702887 | + | NZ_CP030862.1 | Streptomyces globosus |
| 179 | 2956820 | 2957086 | + | NZ_CP014176.1 | Clostridium argentinense |
| 180 | 2053248 | 2053535 | + | NC_013205.1 | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
| 181 | 1385448 | 1385702 | - | NZ_CP060720.1 | Vagococcus carniphilus |
| 182 | 2854017 | 2854283 | + | NZ_LN614827.1 | Legionella fallonii LLAP-10 |
| 183 | 573632 | 573922 | - | NC_020134.1 | Thermoclostridium stercorarium subsp. stercorarium DSM 8532 |
| 184 | 1418990 | 1419256 | - | NC_015687.1 | Clostridium acetobutylicum DSM 1731 |
| 185 | 794762 | 795022 | - | NC_022538.1 | Acholeplasma palmae J233 |
| 186 | 1390274 | 1390531 | + | NZ_CP059829.1 | Lactobacillus ultunensis |
| 187 | 1102531 | 1102794 | - | NZ_LR215048.1 | Acholeplasma axanthum |
| 188 | 5060038 | 5060307 | + | NZ_CP047698.1 | Pseudomonas knackmussii |
| 189 | 6110681 | 6110950 | + | NZ_CP048833.1 | Pseudomonas multiresinivorans |
| 190 | 1098386 | 1098655 | - | NZ_CP014158.1 | Pseudomonas citronellolis |
| 191 | 1347663 | 1347923 | - | NC_015671.1 | Cellulomonas gilvus ATCC 13127 |
| 192 | 2618986 | 2619264 | + | NZ_CP014262.1 | Pseudomonas corrugata |
| 193 | 5155333 | 5155611 | - | NZ_CP048810.1 | Pseudomonas bijieensis |
| 194 | 1317771 | 1318025 | - | NZ_CP017713.1 | Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 |
| 195 | 4575886 | 4576158 | + | NC_011830.1 | Desulfitobacterium hafniense DCB-2 |
| 196 | 996213 | 996473 | - | NZ_CP053642.1 | Actinomyces marmotae |
| 197 | 3359032 | 3359298 | + | NZ_CP011663.1 | Clostridium sporogenes |
| 198 | 2204081 | 2204347 | + | NZ_CP042266.1 | Streptomyces qinzhouensis |
| 199 | 2080799 | 2081059 | + | NZ_CP031961.1 | Pseudoalteromonas tunicata |
| 200 | 4078905 | 4079165 | + | NZ_CP072425.1 | Pseudoalteromonas viridis |
| 201 | 823884 | 824144 | - | NC_010556.1 | Exiguobacterium sibiricum 255-15 |
| 202 | 1998337 | 1998591 | - | NZ_CP023392.1 | Lactococcus raffinolactis |
| 203 | 1431926 | 1432177 | - | NZ_CP016540.2 | Planococcus versutus |
| 204 | 1641457 | 1641717 | + | NZ_HG917868.1 | Clostridium bornimense |
| 205 | 2375749 | 2376015 | + | NZ_CP020700.1 | Streptomyces tsukubensis |
| 206 | 4203774 | 4204046 | + | NC_018068.1 | Desulfosporosinus acidiphilus SJ4 |
| 207 | 2548780 | 2549028 | + | NZ_CP031223.1 | Psychrobacillus glaciei |
| 208 | 6258077 | 6258343 | - | NZ_CP060404.1 | Streptomyces buecherae |
| 209 | 1982122 | 1982385 | + | NZ_CP016786.1 | Clostridium isatidis |
| 210 | 701649 | 701903 | - | NZ_CP041364.1 | Schleiferilactobacillus harbinensis |
| 211 | 1647887 | 1648165 | + | NZ_CP045302.1 | Azotobacter salinestris |
| 212 | 1335741 | 1336016 | - | NZ_LR026975.1 | Mycolicibacterium hassiacum DSM 44199 |
| 213 | 1085727 | 1085975 | - | NZ_LT906464.1 | Staphylococcus muscae |
| 214 | 434321 | 434575 | + | NZ_CP049889.1 | Jeotgalibaca porci |
| 215 | 3125387 | 3125653 | - | NZ_CP012395.1 | Clostridium autoethanogenum DSM 10061 |
| 216 | 875801 | 876067 | - | NC_014328.1 | Clostridium ljungdahlii DSM 13528 |
| 217 | 895200 | 895466 | - | NC_011837.1 | Clostridium kluyveri NBRC 12016 |
| 218 | 1933281 | 1933535 | - | NZ_CP049740.1 | Jeotgalibaca arthritidis |
| 219 | 1419732 | 1419992 | - | NZ_CP036536.1 | Salinimonas lutimaris |
| 220 | 4044862 | 4045137 | + | NZ_LR215729.2 | Pseudomonas marincola |
| 221 | 3618817 | 3619086 | + | NZ_CP011131.1 | Lysobacter gummosus |
| 222 | 5963042 | 5963320 | + | NZ_CP051487.1 | Pseudomonas umsongensis |
| 223 | 4844654 | 4844932 | - | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 224 | 823782 | 824039 | - | NC_021181.2 | Lactobacillus acidophilus La-14 |
| 225 | 2169526 | 2169795 | - | NC_008278.1 | Frankia alni ACN14a |
| 226 | 2802874 | 2803140 | + | NZ_CP023665.1 | Bacillus paralicheniformis |
| 227 | 1343447 | 1343707 | + | NZ_CP020468.1 | Actinomyces gaoshouyii |
| 228 | 195153 | 195413 | - | NZ_LR134350.1 | Actinomyces howellii |
| 229 | 1013923 | 1014174 | + | NZ_CP044496.1 | Lactobacillus acetotolerans |
| 230 | 1505927 | 1506196 | - | NC_007777.1 | Frankia casuarinae |
| 231 | 567675 | 567941 | - | NZ_CP038254.1 | Legionella israelensis |
| 232 | 3538327 | 3538605 | + | NZ_CP011835.1 | Azotobacter chroococcum |
| 233 | 617854 | 618111 | - | NZ_CP015444.1 | Lactobacillus helveticus |
| 234 | 3737761 | 3738021 | - | NZ_CP012150.1 | Mycobacterium goodii |
| 235 | 731570 | 731848 | - | NZ_CP014870.1 | Pseudomonas silesiensis |
| 236 | 436001 | 436264 | + | NZ_LR134167.1 | Avibacterium volantium |
| 237 | 1668738 | 1668989 | + | NZ_CP033460.1 | Staphylococcus debuckii |
| 238 | 2644114 | 2644380 | + | NC_006270.3 | Bacillus licheniformis DSM 13 = ATCC 14580 |
| 239 | 2981816 | 2982076 | + | NZ_CP011853.1 | Gordonia phthalatica |
| 240 | 3171772 | 3172032 | - | NZ_CP072133.1 | Pseudoalteromonas xiamenensis |
| 241 | 736374 | 736634 | - | NZ_AP022563.1 | Mycolicibacterium duvalii |
| 242 | 652635 | 652913 | - | NZ_CP012400.2 | Pseudomonas yamanorum |
| 243 | 1425477 | 1425728 | - | NZ_CP018776.1 | Staphylococcus condimenti |
| 244 | 664146 | 664409 | - | NZ_CP029256.1 | Christensenella minuta |
| 245 | 3365935 | 3366195 | + | NC_016906.1 | Gordonia polyisoprenivorans VH2 |
| 246 | 162961 | 163227 | + | NZ_LR134418.1 | Legionella adelaidensis |
| 247 | 1021977 | 1022249 | - | NZ_CP070503.1 | Pseudomonas atacamensis |
| 248 | 5612968 | 5613240 | + | NZ_CP062253.1 | Pseudomonas gozinkensis |
| 249 | 5634456 | 5634728 | + | NZ_CP062252.1 | Pseudomonas allokribbensis |
| 250 | 5413544 | 5413816 | + | NZ_CP029608.1 | Pseudomonas kribbensis |
| 251 | 5778002 | 5778274 | + | NZ_CP014205.2 | Pseudomonas glycinae |
| 252 | 2983972 | 2984232 | + | NZ_CP031769.1 | Salinimonas sediminis |
| 253 | 363464 | 363727 | + | NZ_CP046531.1 | Mannheimia ovis |
| 254 | 390818 | 391081 | + | NZ_CP055305.1 | Mannheimia pernigra |
| 255 | 1680559 | 1680819 | + | NZ_CP049933.1 | Leucobacter coleopterorum |
| 256 | 1734268 | 1734528 | - | NC_014393.1 | Clostridium cellulovorans 743B |
| 257 | 2036282 | 2036545 | + | NZ_CP048649.1 | Aminipila butyrica |
| 258 | 2138370 | 2138639 | - | NZ_CP023465.1 | Lysobacter capsici |
| 259 | 829951 | 830229 | - | NZ_CP067022.1 | Pseudomonas cannabina pv. alisalensis |
| 260 | 1465963 | 1466214 | - | NZ_CP018888.1 | Amylolactobacillus amylophilus DSM 20533 = JCM 1125 |
| 261 | 3218291 | 3218551 | + | NZ_CP019066.1 | Tsukamurella tyrosinosolvens |
| 262 | 744080 | 744358 | - | NZ_CP042804.1 | Pseudomonas amygdali pv. tabaci str. ATCC 11528 |
| 263 | 5124912 | 5125190 | + | NZ_CP007039.1 | Pseudomonas cichorii JBC1 |
| 264 | 846915 | 847169 | - | NC_016605.1 | Pediococcus claussenii ATCC BAA-344 |
| 265 | 925332 | 925610 | - | NZ_CP018420.1 | Pseudomonas veronii |
| 266 | 1778048 | 1778305 | + | NZ_LT906477.1 | Clostridium cochlearium |
| 267 | 1277437 | 1277691 | - | NZ_AP022822.1 | Enterococcus saigonensis |
| 268 | 838924 | 839202 | - | NZ_CP068034.2 | Pseudomonas syringae |
| 269 | 5911837 | 5912115 | + | NZ_LS999205.1 | Pseudomonas protegens CHA0 |
| 270 | 2129287 | 2129514 | - | NC_017583.1 | Spirochaeta thermophila DSM 6578 |
| 271 | 1870638 | 1870892 | + | NZ_CP046037.1 | Latilactobacillus sakei |
| 272 | 2762138 | 2762404 | + | NZ_CP025491.2 | Legionella sainthelensi |
| 273 | 867260 | 867538 | - | NC_004578.1 | Pseudomonas syringae pv. tomato str. DC3000 |
| 274 | 411513 | 411773 | + | NZ_CP049863.1 | Leucobacter viscericola |
| 275 | 3764091 | 3764363 | + | NC_013510.1 | Thermomonospora curvata DSM 43183 |
| 276 | 685487 | 685738 | - | NZ_AP019750.1 | Lactobacillus delbrueckii subsp. delbrueckii |
| 277 | 1665543 | 1665794 | + | NZ_LR134304.1 | Staphylococcus schweitzeri |
| 278 | 659808 | 660074 | + | NZ_LN849456.1 | Devriesea agamarum |
| 279 | 1115989 | 1116243 | + | NZ_CP045007.1 | Latilactobacillus graminis |
| 280 | 2107074 | 2107340 | + | NZ_CP024957.1 | Streptomyces cavourensis |
| 281 | 3313742 | 3314008 | + | NZ_LT906442.1 | Legionella waltersii |
| 282 | 2486200 | 2486472 | + | NC_015172.1 | Syntrophobotulus glycolicus DSM 8271 |
| 283 | 864786 | 865052 | + | NZ_AP019711.1 | Amedibacterium intestinale |
| 284 | 5222055 | 5222327 | + | NC_016584.1 | Desulfosporosinus orientis DSM 765 |
| 285 | 1600106 | 1600357 | + | NC_007795.1 | Staphylococcus aureus subsp. aureus NCTC 8325 |
| 286 | 5892677 | 5892955 | + | NZ_CP061079.1 | Pseudomonas chlororaphis |
| 287 | 1473930 | 1474187 | - | NZ_CP044499.1 | Lapidilactobacillus dextrinicus |
| 288 | 8561451 | 8561717 | - | NC_016582.1 | Streptomyces bingchenggensis BCW-1 |
| 289 | 329793 | 330041 | - | NZ_CP065729.1 | Macrococcus caseolyticus |
| 290 | 1417089 | 1417337 | + | NZ_CP047361.1 | Macrococcus canis |
| 291 | 2298586 | 2298846 | + | NZ_AP022601.1 | Mycobacterium gallinarum |
| 292 | 2227038 | 2227262 | - | NZ_CP011129.1 | Lysobacter antibioticus |
| 293 | 1859364 | 1859627 | + | NZ_CP016605.1 | Bisgaardia hudsonensis |
| 294 | 364702 | 364956 | - | NZ_CP012034.1 | Companilactobacillus ginsenosidimutans |
| 295 | 3106612 | 3106878 | + | NC_013861.1 | Legionella longbeachae NSW150 |
| 296 | 2773476 | 2773736 | - | NZ_CP059694.1 | Gordonia rubripertincta |
| 297 | 1529993 | 1530241 | + | NZ_CP054482.1 | Macrococcus bohemicus |
| 298 | 4679504 | 4679764 | + | NZ_LN831039.1 | Mycolicibacterium smegmatis |
| 299 | 5105086 | 5105352 | - | NZ_CP023202.1 | Streptomyces xinghaiensis S187 |
| 300 | 3091855 | 3092103 | + | NZ_CP006837.1 | Lysinibacillus varians |
| 301 | 1562212 | 1562460 | - | NZ_CP019980.1 | Lysinibacillus sphaericus |
| 302 | 1332702 | 1332953 | + | NZ_CP038012.1 | Sporosarcina pasteurii |
| 303 | 1338521 | 1338796 | - | NC_015672.1 | Flexistipes sinusarabici DSM 4947 |
| 304 | 2491396 | 2491662 | + | NZ_CP013019.1 | Clostridium pasteurianum |
| 305 | 1468541 | 1468807 | + | NZ_CP029254.1 | Streptomyces spongiicola |
| 306 | 828958 | 829212 | - | NZ_CP049886.1 | Vagococcus coleopterorum |
| 307 | 2477284 | 2477550 | + | NZ_CP072827.1 | Streptomyces mobaraensis NBRC 13819 = DSM 40847 |
| 308 | 1722741 | 1723004 | - | NZ_CP018804.1 | Histophilus somni |
| 309 | 1895624 | 1895875 | - | NZ_CP014616.1 | Sporosarcina psychrophila |
| 310 | 5793472 | 5793738 | - | NZ_CP011340.1 | Streptomyces pristinaespiralis |
| 311 | 1093862 | 1094128 | - | NZ_LS483427.1 | Arcanobacterium haemolyticum |
| 312 | 2509593 | 2509853 | - | NZ_LR134352.1 | Nocardia asteroides |
| 313 | 5800284 | 5800550 | + | NC_013947.1 | Stackebrandtia nassauensis DSM 44728 |
| 314 | 1292690 | 1292947 | + | NZ_CP061341.1 | Lactobacillus kefiranofaciens |
| 315 | 509252 | 509515 | - | NZ_CP061280.1 | Mannheimia bovis |
| 316 | 1546791 | 1547051 | + | NZ_CP066060.1 | Actinomyces oris |
| 317 | 520231 | 520491 | - | NZ_LR134477.1 | Actinomyces viscosus |
| 318 | 2588742 | 2589002 | + | NZ_CP066049.1 | Actinomyces naeslundii |
| 319 | 92791 | 93042 | + | NZ_CP018906.1 | Lentilactobacillus curieae |
| 320 | 1154344 | 1154604 | - | NC_016041.1 | Glaciecola nitratireducens FR1064 |
| 321 | 1892726 | 1892992 | + | NZ_CP017316.1 | Streptomyces rubrolavendulae |
| 322 | 2028176 | 2028442 | + | NZ_CP023696.1 | Streptomyces fradiae ATCC 10745 = DSM 40063 |
| 323 | 1588538 | 1588789 | + | NZ_LT906460.1 | Staphylococcus simiae |
| 324 | 2563983 | 2564243 | - | NZ_CP027114.1 | Gordonia alkanivorans |
| 325 | 5383227 | 5383487 | - | NZ_CP041146.1 | Nocardioides humi |
| 326 | 799116 | 799379 | + | NZ_CP045562.1 | Fructilactobacillus fructivorans |
| 327 | 1814169 | 1814435 | + | NZ_CP029188.1 | Streptomyces tirandamycinicus |
| 328 | 1173314 | 1173571 | + | NC_008530.1 | Lactobacillus gasseri ATCC 33323 = JCM 1131 |
| 329 | 1214534 | 1214791 | + | NZ_AP018549.1 | Lactobacillus paragasseri |
| 330 | 1530694 | 1530954 | - | NZ_CP018082.1 | Nocardia mangyaensis |
| 331 | 4410511 | 4410771 | + | NZ_CP022088.2 | Nocardia brasiliensis |
| 332 | 916094 | 916342 | - | NZ_CP024610.1 | Lactobacillus terrae |
| 333 | 1544795 | 1545055 | + | NZ_AP022603.1 | Mycolicibacterium fallax |
| 334 | 4185380 | 4185652 | + | NC_018515.1 | Desulfosporosinus meridiei DSM 13257 |
| 335 | 1158796 | 1159050 | + | NZ_CP017195.1 | Lactococcus paracarnosus |
| 336 | 2345394 | 2345660 | + | NZ_CP015866.1 | Streptomyces parvulus |
| 337 | 557661 | 557912 | - | NZ_CP032626.1 | Apilactobacillus bombintestini |
| 338 | 1326017 | 1326283 | - | NZ_CP061539.1 | Rothia terrae |
| 339 | 5809274 | 5809540 | - | NZ_CP032698.1 | Streptomyces hundungensis |
| 340 | 2048423 | 2048683 | - | NZ_CP061336.1 | Ruminiclostridium herbifermentans |
| 341 | 2243180 | 2243410 | - | NC_015500.1 | Treponema brennaborense DSM 12168 |
| 342 | 1175057 | 1175314 | + | NZ_CP059276.1 | Lactobacillus taiwanensis |
| 343 | 267966 | 268220 | + | NZ_CP029971.1 | Lentilactobacillus kefiri |
| 344 | 992228 | 992494 | - | NZ_LN614830.1 | Tatlockia micdadei |
| 345 | 1388144 | 1388407 | + | NZ_CP035130.1 | Gudongella oleilytica |
| 346 | 1127323 | 1127577 | + | NZ_CP017194.1 | Lactococcus carnosus |
| 347 | 2406169 | 2406435 | + | NZ_CP029196.1 | Streptomyces venezuelae |
| 348 | 672534 | 672788 | - | NZ_CP011403.1 | Ligilactobacillus salivarius str. Ren |
| 349 | 3945822 | 3946082 | - | NZ_CP015235.1 | Rhodococcus fascians D188 |
| 350 | 1605709 | 1605936 | - | NZ_CP023406.1 | Luteimonas chenhongjianii |
| 351 | 142177 | 142431 | + | NZ_CP018796.1 | Lentilactobacillus parabuchneri |
| 352 | 5303151 | 5303417 | - | NZ_CP023702.1 | Streptomyces nitrosporeus |
| 353 | 1105397 | 1105657 | - | NZ_AP012273.1 | Thiolapillus brandeum |
| 354 | 4966585 | 4966851 | - | NZ_CP023692.1 | Streptomyces vinaceus |
| 355 | 630979 | 631233 | + | NZ_CP014163.1 | Aerococcus urinaehominis |
| 356 | 6746776 | 6747042 | + | NZ_CP051486.1 | Streptomyces pratensis |
| 357 | 4182375 | 4182635 | + | NC_008726.1 | Mycolicibacterium vanbaalenii PYR-1 |
| 358 | 3566850 | 3567116 | + | NZ_CP023690.1 | Streptomyces spectabilis |
| 359 | 1654202 | 1654435 | + | NZ_CP070872.1 | Lactococcus taiwanensis |
| 360 | 415685 | 415909 | - | NZ_CP029556.1 | Lysobacter oculi |
| 361 | 2193379 | 2193627 | + | NZ_CP019323.1 | Companilactobacillus allii |
| 362 | 3427023 | 3427283 | + | NZ_CP022295.1 | Nocardioides aromaticivorans |
| 363 | 2008057 | 2008317 | + | NZ_CP038266.1 | Microbacterium wangchenii |
| 364 | 1951683 | 1951943 | + | NZ_CP044232.1 | Microbacterium lushaniae |
| 365 | 6291016 | 6291282 | - | NZ_CP023688.1 | Streptomyces rimosus |
| 366 | 3563824 | 3564084 | + | NZ_CP009896.1 | Pimelobacter simplex |
| 367 | 678426 | 678686 | - | NZ_LT985188.1 | Micropruina glycogenica |
| 368 | 1568403 | 1568690 | + | NZ_AP018712.1 | Tepiditoga spiralis |
| 369 | 729806 | 730057 | - | NZ_CP029476.1 | Lactobacillus apis |
| 370 | 1447468 | 1447722 | + | NZ_CP018180.1 | Liquorilactobacillus nagelii |
| 371 | 1266104 | 1266364 | - | NZ_CP031421.1 | Microbacterium oleivorans |
| 372 | 1234984 | 1235244 | - | NZ_CP031421.1 | Microbacterium oleivorans |
| 373 | 441730 | 441996 | + | NZ_CP044548.2 | Janibacter melonis |
| 374 | 847305 | 847553 | - | NZ_CP049366.1 | Companilactobacillus pabuli |
| 375 | 1603950 | 1604198 | + | NZ_CP017702.1 | Companilactobacillus farciminis KCTC 3681 = DSM 20184 |
| 376 | 1494139 | 1494387 | + | NZ_CP040736.1 | Companilactobacillus futsaii |
| 377 | 687389 | 687643 | - | NZ_CP045530.1 | Limosilactobacillus pontis |
| 378 | 156818 | 157069 | - | NC_021284.1 | Spiroplasma syrphidicola EA-1 |
| 379 | 1147196 | 1147450 | + | NC_008525.1 | Pediococcus pentosaceus ATCC 25745 |
| 380 | 703032 | 703286 | - | NZ_CP044534.1 | Limosilactobacillus frumenti |
| 381 | 2511776 | 2512042 | + | NZ_CP072931.1 | Streptomyces auratus AGR0001 |
| 382 | 2686327 | 2686551 | - | NZ_CP060820.1 | Lysobacter solisilvae (ex Woo and Kim 2020) |
| 383 | 1243220 | 1243483 | - | NZ_CP056080.1 | Rothia nasimurium |
| 384 | 89568 | 89846 | - | NZ_CP012676.1 | Pseudomonas versuta |
| 385 | 725174 | 725428 | - | NZ_CP045605.1 | Limosilactobacillus reuteri |
| 386 | 925402 | 925653 | - | NZ_CP029477.1 | Lactobacillus kullabergensis |
| 387 | 779795 | 780046 | + | NZ_CP031835.1 | Lactobacillus amylolyticus |
| 388 | 2922489 | 2922755 | + | NZ_CP019457.1 | Streptomyces lydicus |
| 389 | 673411 | 673665 | - | NZ_CP045240.1 | Limosilactobacillus vaginalis |
| 390 | 2995578 | 2995844 | + | NZ_CP023691.1 | Streptomyces platensis |
| 391 | 966673 | 966936 | - | NZ_CP027286.1 | Clostridium chauvoei |
| 392 | 888472 | 888744 | - | NC_014377.1 | Thermosediminibacter oceani DSM 16646 |
| 393 | 1425031 | 1425309 | - | NZ_CP049044.1 | Pseudomonas psychrophila |
| 394 | 828417 | 828695 | - | NZ_CP062158.2 | Pseudomonas lundensis |
| 395 | 3472101 | 3472361 | - | NZ_CP035806.1 | Leucobacter triazinivorans |
| 396 | 3354115 | 3354360 | + | NZ_CP020569.1 | Streptomyces gilvosporeus |
| 397 | 1251364 | 1251618 | + | NZ_CP053421.1 | Pediococcus acidilactici |
| 398 | 1667005 | 1667265 | - | NZ_CP031422.1 | Microbacterium oxydans |
| 399 | 1169939 | 1170190 | + | NZ_CP018809.1 | Lactobacillus jensenii |
| 400 | 3851284 | 3851547 | - | NZ_CP044060.1 | Aeromonas veronii |
| 401 | 4100734 | 4100997 | - | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 402 | 4131196 | 4131459 | + | NZ_AP022188.1 | Aeromonas media |
| 403 | 717250 | 717513 | - | NZ_CP050851.1 | Aeromonas hydrophila |
| 404 | 1324729 | 1324989 | + | NZ_AP014680.1 | Paucilactobacillus hokkaidonensis JCM 18461 |
| 405 | 842290 | 842526 | - | NC_017581.1 | Streptococcus thermophilus JIM 8232 |
| 406 | 3241217 | 3241480 | + | NC_012691.1 | Tolumonas auensis DSM 9187 |
| 407 | 911367 | 911627 | - | NZ_CP019606.1 | Tessaracoccus aquimaris |
| 408 | 1293178 | 1293444 | - | NZ_CP040924.1 | Clostridium thermarum |
| 409 | 2774781 | 2775041 | - | NZ_CP033719.1 | Propionibacterium acidifaciens |
| 410 | 3478692 | 3478952 | + | NZ_CP035494.1 | Microbacterium protaetiae |
| 411 | 135236 | 135496 | + | NZ_CP019607.1 | Tessaracoccus flavescens |
| 412 | 602315 | 602584 | + | NZ_CP047156.1 | Epidermidibacterium keratini |
| 413 | 2577864 | 2578127 | + | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
| 414 | 3321558 | 3321821 | - | NZ_CP053564.1 | Pseudonocardia broussonetiae |
| 415 | 2360690 | 2360959 | - | NZ_CP045572.1 | Nonomuraea nitratireducens |
| 416 | 334605 | 334865 | - | NZ_CP049253.1 | Microbacterium amylolyticum |
| 417 | 622689 | 622949 | - | NZ_CP007490.1 | Rhodoluna lacicola |
| 418 | 4161222 | 4161500 | + | NZ_AP021861.1 | Lacipirellula parvula |
| 419 | 2002282 | 2002533 | - | NZ_CP011454.1 | Gemmatimonas phototrophica |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP033433.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF06144.15 | 0.74 | 310 | 97 | opposite-strand | DNA polymerase III, delta subunit |
| 2 | PF03772.18 | 0.63 | 262 | 1489.5 | opposite-strand | Competence protein |
| 3 | PF00009.29 | 0.65 | 269 | 3067.0 | opposite-strand | Elongation factor Tu GTP binding domain |
| 4 | PF03144.27 | 0.64 | 267 | 3067.0 | opposite-strand | Elongation factor Tu domain 2 |
| 5 | PF01926.25 | 0.63 | 264 | 3077 | opposite-strand | 50S ribosome-binding GTPase |
++ More..