ProsmORF-pred
Result : C0QM36
Protein Information
Information Type Description
Protein name 50S ribosomal protein L28
NCBI Accession ID CP001087.1
Organism Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)
Left 1394683
Right 1394907
Strand -
Nucleotide Sequence ATGTCCAAGGAATGCAAGATATGCGGAAAAAAACCCATGGTTGGAAACAATGTCAGCCATGCACACAATGTTAACAAAAGAAGGTTCAACCCCAACCTTCAGCGGGTAAAGGCCCTTTTTGATGGCCAGGTAAGACGTATCGATGTATGCACAAGCTGCATCAAGGCCGGCAAGGTAGTCAAGGCCCCGACCATGGGCCAGGGAAAGGTCACCAGCGCTTCCTAA
Sequence MSKECKICGKKPMVGNNVSHAHNVNKRRFNPNLQRVKALFDGQVRRIDVCTSCIKAGKVVKAPTMGQGKVTSAS
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl00367. Profile Description: Ribosomal L28 family. This model describes bacterial and chloroplast forms of the 50S ribosomal protein L28, a polypeptide about 60 amino acids in length. Mitochondrial homologs differ substantially in architecture (e.g. SP|P36525 from Saccharomyces cerevisiae, which is 258 amino acids long) and are not included. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Pubmed ID 19187283
Domain CDD:412338
Functional Category Ribosomal_protein
Uniprot ID C0QM36
ORF Length (Amino Acid) 74
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 257
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 1394683 1394907 - NC_012108.1 Desulfobacterium autotrophicum HRM2
2 395950 396141 - NZ_CP061800.1 Desulfonema magnum
3 4129354 4129545 - NZ_AP021875.1 Desulfosarcina widdelii
4 84611 84805 - NC_018645.1 Desulfobacula toluolica Tol2
5 5655213 5655404 + NZ_AP021876.1 Desulfosarcina ovata subsp. sediminis
6 1353011 1353202 + NZ_CP061799.1 Desulfonema limicola
7 3137974 3138165 - NC_011768.1 Desulfatibacillum aliphaticivorans
8 3400021 3400212 - NZ_AP021874.1 Desulfosarcina alkanivorans
9 2506165 2506356 + NC_009943.1 Desulfococcus oleovorans Hxd3
10 590425 590613 + NC_016631.1 Granulicella mallensis MP5ACTX8
11 127051 127239 - NZ_CP042806.1 Terriglobus albidus
12 1474432 1474641 - NZ_CP039543.1 Desulfovibrio marinus
13 2259177 2259371 + NZ_AP017470.1 Thermotomaculum hydrothermale
14 1149930 1150121 - NZ_CP018799.1 Mariprofundus aestuarium
15 1229619 1229810 + NZ_CP018800.1 Mariprofundus ferrinatatus
16 6894698 6894889 + NZ_CP015136.1 Luteitalea pratensis
17 2986008 2986229 + NC_011891.1 Anaeromyxobacter dehalogenans 2CP-1
18 1394517 1394708 + NC_014365.1 Desulfarculus baarsii DSM 2075
19 515443 515655 - NC_014963.1 Terriglobus saanensis SP1PR4
20 2530059 2530250 + NC_015388.1 Desulfobacca acetoxidans DSM 11109
21 1383459 1383650 - NC_013205.1 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
22 1396935 1397135 - NZ_CP014230.1 Desulfomicrobium orale DSM 12838
23 1642582 1642779 - NC_013223.1 Desulfohalobium retbaense DSM 5692
24 1524820 1525011 - NZ_CP010311.1 Geoalkalibacter subterraneus
25 4079088 4079276 + NZ_CP030840.1 Acidisarcina polymorpha
26 1437234 1437443 - NZ_CP014229.1 Desulfovibrio fairfieldensis
27 5419634 5419825 + NZ_CP012109.1 Myxococcus hansupus
28 2960011 2960202 + NZ_CP022657.1 Tumebacillus algifaecis
29 2055762 2055953 - NC_020520.1 Ilumatobacter coccineus YM16-304
30 1789531 1789722 - NC_012785.1 Kosmotoga olearia TBF 19.5.1
31 2327689 2327883 - NZ_CP040098.1 Desulfoglaeba alkanexedens ALDC
32 3217293 3217499 + NZ_CP036250.1 Egicoccus halophilus
33 1510522 1510713 - NC_007498.2 Syntrophotalea carbinolica DSM 2380
34 1843116 1843313 - NZ_CP018099.1 Caldithrix abyssi DSM 13497
35 210188 210385 + NZ_CP021255.1 Desulfobulbus oralis
36 2370058 2370267 - NZ_AP017378.1 Desulfovibrio ferrophilus
37 3146240 3146431 - NZ_CP022203.1 Corallococcus macrosporus DSM 14697
38 2726838 2727026 + NZ_CP035108.1 Geovibrio thiophilus
39 93627 93827 + NC_013173.1 Desulfomicrobium baculatum DSM 4028
40 6725459 6725650 + NC_017030.1 Corallococcus coralloides DSM 2259
41 1568009 1568200 + NC_017094.1 Leptospirillum ferrooxidans C2-3
42 4200533 4200724 + NC_015064.1 Granulicella tundricola MP5ACTX9
43 2591419 2591607 + NC_014830.1 Intrasporangium calvum DSM 43043
44 3928090 3928281 - NC_020126.1 Myxococcus stipitatus DSM 14675
45 3146723 3146914 - NC_008095.1 Myxococcus xanthus DK 1622
46 2296892 2297083 + NZ_CP009788.1 Geobacter pickeringii
47 2382681 2382872 - NC_011979.1 Geobacter daltonii FRC-32
48 3406436 3406627 - NZ_CP021434.1 Tumebacillus avium
49 1293914 1294099 - NZ_CP026952.1 Aeromicrobium chenweiae
50 694167 694361 - NZ_AP013035.1 Thermosulfidibacter takaii ABI70S6
51 591229 591420 + NZ_CP011232.1 Kosmotoga pacifica
52 922055 922249 + NC_015318.1 Hippea maritima DSM 10411
53 521886 522074 + NC_013943.1 Denitrovibrio acetiphilus DSM 12809
54 290288 290476 + NC_014216.1 Desulfurivibrio alkaliphilus AHT 2
55 323349 323540 - NZ_CP012332.1 Vulgatibacter incomptus
56 721284 721496 + NC_012881.1 Maridesulfovibrio salexigens DSM 2638
57 3729871 3730062 + NC_009483.1 Geobacter uraniireducens Rf4
58 1366684 1366878 - NZ_CP045851.1 Actinomarinicola tropica
59 5095063 5095248 - NZ_CP041146.1 Nocardioides humi
60 2466617 2466808 + NC_013530.1 Xylanimonas cellulosilytica DSM 15894
61 2218127 2218312 + NZ_CP023692.1 Streptomyces vinaceus
62 530935 531126 + NZ_CP022163.1 Melittangium boletus DSM 14713
63 2449918 2450109 + NC_002939.5 Geobacter sulfurreducens PCA
64 1195526 1195711 - NZ_CP045737.1 Aeromicrobium yanjiei
65 3038123 3038308 + NZ_CP045643.1 Streptomyces fagopyri
66 1396902 1397087 - NZ_CP030862.1 Streptomyces globosus
67 1372361 1372549 + NC_015499.1 Thermodesulfobium narugense DSM 14796
68 2631537 2631728 + NC_007517.1 Geobacter metallireducens GS-15
69 5710884 5711069 - NZ_CP023695.1 Streptomyces alboniger
70 6643681 6643866 - NZ_CP022685.1 Streptomyces formicae
71 3061509 3061694 + NZ_CP023699.1 Streptomyces kanamyceticus
72 315048 315236 - NC_013939.1 Deferribacter desulfuricans SSM1
73 457448 457639 + NC_017934.1 Mesotoga prima MesG1.Ag.4.2
74 4770317 4770502 - NZ_CP054938.1 Streptomyces harbinensis
75 4671955 4672140 - NZ_CP009922.3 Streptomyces xiamenensis
76 6740455 6740640 - NZ_CP023690.1 Streptomyces spectabilis
77 923699 923896 - NZ_CP042909.1 Thermosulfurimonas marina
78 1025625 1025834 - NC_020127.1 Lawsonia intracellularis N343
79 3249090 3249281 + NZ_CP041694.1 Cellulosimicrobium cellulans
80 2959362 2959547 + NZ_CP022744.1 Streptomyces lincolnensis
81 1017872 1018063 - NZ_CP033325.1 Georgenia faecalis
82 6348770 6348955 - NZ_CP071139.1 Streptomyces nojiriensis
83 2074614 2074811 + NC_014246.1 Mobiluncus curtisii ATCC 43063
84 5448150 5448335 - NZ_CP023693.1 Streptomyces cinereoruber
85 756705 756896 - NZ_CP048877.1 Thermosulfuriphilus ammonigenes
86 3019090 3019275 + NC_013929.1 Streptomyces scabiei 87.22
87 3732350 3732535 + NZ_CP009896.1 Pimelobacter simplex
88 3578334 3578519 + NZ_CP022295.1 Nocardioides aromaticivorans
89 1812845 1813036 + NZ_CP024955.1 Kyrpidia spormannii
90 1884609 1884794 + NZ_CP048882.1 Streptomyces bathyalis
91 1176413 1176604 - NZ_AP023213.1 Citrifermentans bremense
92 3699566 3699757 + NC_011146.1 Citrifermentans bemidjiense Bem
93 5364040 5364225 - NZ_CP021080.1 Streptomyces pluripotens
94 5841343 5841528 - NZ_CP063374.1 Streptomyces chromofuscus
95 5584811 5584996 - NZ_CP010849.1 Streptomyces cyaneogriseus subsp. noncyanogenus
96 2271767 2271952 + NZ_CP022310.1 Streptomyces calvus
97 2572251 2572436 + NZ_LN831790.1 Streptomyces leeuwenhoekii
98 6015956 6016141 - NC_021985.1 Streptomyces collinus Tu 365
99 2815077 2815262 + NZ_CP051006.1 Streptomyces griseofuscus
100 6605788 6605973 - NZ_CP047020.1 Streptomyces broussonetiae
101 3069884 3070069 + NZ_CP023689.1 Streptomyces chartreusis
102 7943860 7944045 + NZ_CP063373.1 Streptomyces ferrugineus
103 7634474 7634659 - NZ_CP045096.1 Streptomyces phaeolivaceus
104 7367716 7367901 - NZ_CP034463.1 Streptomyces aquilus
105 7180840 7181025 - NZ_CP034539.1 Streptomyces cyaneochromogenes
106 2329441 2329632 - NC_015672.1 Flexistipes sinusarabici DSM 4947
107 1519730 1519921 - NC_011661.1 Dictyoglomus turgidum DSM 6724
108 1335333 1335524 - NC_011297.1 Dictyoglomus thermophilum H-6-12
109 4482923 4483108 - NZ_CP032229.1 Streptomyces seoulensis
110 5433798 5433983 - NZ_AP023439.1 Streptomyces tuirus
111 5367710 5367895 - NZ_CP029043.1 Streptomyces nigra
112 5649434 5649619 - NZ_CP012382.1 Streptomyces ambofaciens ATCC 23877
113 6199638 6199823 - NZ_CP021978.1 Streptomyces hawaiiensis
114 2738369 2738554 + NZ_CP034687.1 Streptomyces griseoviridis
115 3283164 3283349 + NC_003155.5 Streptomyces avermitilis MA-4680 = NBRC 14893
116 6390075 6390260 - NZ_CP015098.1 Streptomyces qaidamensis
117 6620101 6620286 - NZ_CP023694.1 Streptomyces coeruleorubidus
118 1495687 1495872 + NC_020990.1 Streptomyces albidoflavus
119 1874723 1874908 + NZ_CP031742.1 Streptomyces koyangensis
120 2714694 2714885 + NC_015514.1 Cellulomonas fimi ATCC 484
121 1445310 1445501 - NC_014098.1 Kyrpidia tusciae DSM 2912
122 656825 657016 - NC_013170.1 Cryptobacterium curtum DSM 15641
123 4976326 4976511 - NZ_CP029188.1 Streptomyces tirandamycinicus
124 2705666 2705851 + NZ_CP011340.1 Streptomyces pristinaespiralis
125 6269978 6270163 - NZ_CP059991.1 Streptomyces gardneri
126 1093601 1093786 - NZ_CP049257.1 Nocardioides anomalus
127 5192162 5192347 - NZ_CP015866.1 Streptomyces parvulus
128 5388546 5388731 - NZ_CP072827.1 Streptomyces mobaraensis NBRC 13819 = DSM 40847
129 5531952 5532137 - NZ_CP029196.1 Streptomyces venezuelae
130 2581635 2581829 + NC_020304.1 Desulfocapsa sulfexigens DSM 10523
131 430164 430376 - NC_011978.1 Thermotoga neapolitana DSM 4359
132 2595584 2595775 + NC_008609.1 Pelobacter propionicus DSM 2379
133 1282007 1282195 + NZ_CP020921.1 Thermodesulfobium acidiphilum
134 2615176 2615379 + NC_016629.1 Desulfocurvibacter africanus subsp. africanus str. Walvis Bay
135 789975 790184 - NZ_CP045508.1 Desulfolutivibrio sulfoxidireducens
136 1815415 1815627 - NZ_CP046400.1 Pseudodesulfovibrio cashew
137 5827510 5827695 - NZ_CP031194.1 Streptomyces paludis
138 3245726 3245917 + NZ_CP019066.1 Tsukamurella tyrosinosolvens
139 388766 388966 + NZ_AP014509.1 Thermotoga caldifontis AZM44c09
140 2135153 2135344 + NC_012483.1 Acidobacterium capsulatum ATCC 51196
141 716113 716304 - NZ_CP009302.1 Berryella intestinalis
142 2443775 2443969 + NC_010814.1 Geobacter lovleyi SZ
143 67925 68119 - NZ_CP054140.1 Desulfobulbus oligotrophicus
144 614068 614265 - NC_015681.1 Thermodesulfatator indicus DSM 15286
145 2582491 2582676 - NZ_LR134442.1 Propionibacterium australiense
146 5290158 5290343 - NZ_CP040752.1 Streptomyces rectiverticillatus
147 680094 680306 - NC_023151.1 Thermotoga maritima MSB8
148 1411440 1411637 + NC_015682.1 Thermodesulfobacterium geofontis OPF15
149 617399 617605 + NZ_CP026538.1 Desulfovibrio carbinolicus
150 4515650 4515856 - NC_012796.1 Desulfovibrio magneticus RS-1
151 1723106 1723303 + NC_009828.1 Pseudothermotoga lettingae TMO
152 1758161 1758358 + NC_022792.1 Pseudothermotoga elfii DSM 9442 = NBRC 107921
153 4011924 4012118 - NC_008554.1 Syntrophobacter fumaroxidans MPOB
154 2859890 2860084 - NC_014972.1 Desulfobulbus propionicus DSM 2032
155 2859120 2859311 + NC_021184.1 Desulfoscipio gibsoniae DSM 7213
156 1846451 1846666 + NC_016803.1 Pseudodesulfovibrio mercurii
157 4458691 4458885 + NC_018025.1 Desulfomonile tiedjei DSM 6799
158 6692422 6692607 - NZ_CP031455.1 Streptomyces olivoreticuli subsp. olivoreticuli
159 1094020 1094211 + NC_022567.1 Adlercreutzia equolifaciens DSM 19450
160 1618180 1618371 - NC_013204.1 Eggerthella lenta DSM 2243
161 1011008 1011199 - NZ_CP011402.1 Denitrobacterium detoxificans
162 575850 576047 + NZ_AP014945.1 Caldimicrobium thiodismutans
163 8842384 8842575 - NZ_CP022088.2 Nocardia brasiliensis
164 2447280 2447489 - NC_007519.1 Desulfovibrio alaskensis G20
165 1311653 1311841 + NC_007503.1 Carboxydothermus hydrogenoformans Z-2901
166 2762051 2762266 - NZ_LT907975.1 Pseudodesulfovibrio profundus
167 6294779 6294967 + NC_008278.1 Frankia alni ACN14a
168 916606 916818 + NC_013642.1 Thermotoga naphthophila RKU-10
169 3937136 3937324 - NC_013739.1 Conexibacter woesei DSM 14684
170 269708 269899 + NC_017583.1 Spirochaeta thermophila DSM 6578
171 1345495 1345716 - NZ_CP014334.1 Fervidobacterium islandicum
172 678002 678214 - NC_009486.1 Thermotoga petrophila RKU-1
173 3046959 3047150 + NZ_CP042430.1 Baekduia soli
174 1584701 1584889 + NC_013124.1 Acidimicrobium ferrooxidans DSM 10331
175 9254051 9254236 + NZ_CP045572.1 Nonomuraea nitratireducens
176 1884862 1885056 + NC_006138.1 Desulfotalea psychrophila LSv54
177 3083832 3084020 + NC_014624.2 Eubacterium callanderi
178 1355825 1356013 + NZ_CP029487.1 Eubacterium maltosivorans
179 3628791 3629000 - NZ_CP045504.1 Desulfovibrio sulfodismutans DSM 3696
180 1983993 1984184 + NC_013385.1 Ammonifex degensii KC4
181 5205514 5205708 - NC_022663.1 Mycobacterium kansasii ATCC 12478
182 2162608 2162796 - NZ_CP019962.1 Eubacterium limosum
183 1005839 1006033 - NZ_CP013290.1 Janibacter indicus
184 1304751 1304960 + NC_017310.1 Desulfovibrio vulgaris RCH1
185 382962 383156 + NZ_AP012326.1 Bifidobacterium dentium JCM 1195 = DSM 20436
186 1129980 1130171 - NC_014831.1 Thermaerobacter marianensis DSM 12885
187 242257 242454 - NZ_CP008796.1 Thermodesulfobacterium commune DSM 2178
188 2937586 2937777 + NC_014158.1 Tsukamurella paurometabola DSM 20162
189 4347103 4347294 + NC_006361.1 Nocardia farcinica IFM 10152
190 786207 786398 - NZ_LT821227.1 Phoenicibacter congonensis
191 1187869 1188060 - NC_013216.1 Desulfofarcimen acetoxidans DSM 771
192 5318037 5318231 + NZ_AP022598.1 Mycolicibacterium parafortuitum
193 580664 580855 - NZ_CP009498.1 Endomicrobium proavitum
194 426032 426226 - NZ_AP022620.1 Mycolicibacterium anyangense
195 1559822 1560010 + NZ_LT906462.1 Mammaliicoccus stepanovicii
196 2973280 2973468 - NZ_CP034248.1 Paenibacillus lentus
197 2009884 2010084 - NZ_AP014510.1 Thermotoga profunda AZM34c06
198 2273276 2273467 - NZ_AP023396.1 Nocardia wallacei
199 1381423 1381617 + NZ_CP044548.2 Janibacter melonis
200 2488385 2488579 + NZ_AP022563.1 Mycolicibacterium duvalii
201 3440892 3441086 + NZ_AP024310.1 Mycobacterium heckeshornense
202 2072091 2072282 - NZ_CP029146.1 Rhodococcus ruber
203 5755575 5755766 + NZ_LR134352.1 Nocardia asteroides
204 4871441 4871632 + NZ_CP018082.1 Nocardia mangyaensis
205 4838869 4839060 + NZ_CP041695.1 Nocardia otitidiscaviarum
206 3238715 3238906 + NC_015564.1 Hoyosella subflava DQS3-9A1
207 2550460 2550654 - NZ_LN831039.1 Mycolicibacterium smegmatis
208 1012236 1012430 - NZ_LR026975.1 Mycolicibacterium hassiacum DSM 44199
209 2119133 2119327 - NZ_CP011491.1 Mycolicibacterium vaccae 95051
210 4362491 4362685 + NZ_AP022560.1 Mycolicibacterium moriokaense
211 3023339 3023536 + NZ_CP010271.1 Mycobacteroides saopaulense
212 3636426 3636620 + NZ_CP009360.4 Mycobacterium avium subsp. hominissuis
213 3623828 3624019 - NZ_CP026746.1 Nocardia cyriacigeorgica
214 3035497 3035709 + NC_014844.1 Pseudodesulfovibrio aespoeensis Aspo-2
215 3315522 3315716 - NZ_AP022583.1 Mycobacterium noviomagense
216 4714809 4714994 - NC_016111.1 Streptomyces cattleya NRRL 8057 = DSM 46488
217 4062347 4062544 - NZ_AP022600.1 Mycolicibacterium tokaiense
218 4947002 4947196 + NZ_AP022606.1 Mycobacterium branderi
219 5643442 5643636 - NZ_AP022573.1 Mycobacterium saskatchewanense
220 2263333 2263524 - NZ_AP017900.1 Nocardia seriolae
221 2530773 2530964 + NZ_CP048813.1 Rhodococcus triatomae
222 4551528 4551722 - NZ_AP022596.1 Mycolicibacterium helvum
223 606344 606538 - NZ_AP022601.1 Mycobacterium gallinarum
224 2441800 2441991 - NZ_CP022208.1 Rhodococcus pyridinivorans
225 2035275 2035466 - NZ_LT906450.1 Rhodococcus rhodochrous
226 1792707 1792901 + NZ_AP022608.1 Mycolicibacterium gadium
227 1325255 1325443 - NC_014666.1 Frankia inefficax
228 3096161 3096358 + NZ_CP024633.1 Mycobacteroides salmoniphilum
229 3228204 3228401 + NZ_AP018165.1 [Mycobacterium] stephanolepidis
230 3289385 3289582 + NZ_CP007220.1 Mycobacteroides chelonae CCUG 47445
231 3326828 3327025 + NZ_CP014955.1 Mycobacteroides abscessus
232 3525205 3525402 + NZ_CP011530.1 Mycobacteroides immunogenum
233 2172400 2172594 - NZ_CP025546.1 Mycobacterium paragordonae
234 3722952 3723146 + NZ_CP023147.1 Mycobacterium marseillense
235 2406914 2407105 + NZ_CP020559.1 Clostridium formicaceticum
236 1552813 1553007 + NZ_AP022593.1 Mycolicibacterium arabiense
237 764391 764585 - NZ_AP022575.1 Mycobacterium shinjukuense
238 2213134 2213328 - NZ_AP022610.1 Mycolicibacterium madagascariense
239 1675601 1675798 + NC_007759.1 Syntrophus aciditrophicus SB
240 3009524 3009715 + NZ_CP011853.1 Gordonia phthalatica
241 1191438 1191632 - NZ_LT906453.1 Dermatophilus congolensis
242 376605 376796 + NZ_AP022599.1 Mycolicibacterium pulveris
243 881915 882109 + NZ_AP022568.1 Mycobacterium simiae
244 126608 126802 - NZ_AP022590.1 Mycobacterium mantenii
245 3876218 3876409 + NC_016946.1 Mycobacterium intracellulare ATCC 13950
246 3993744 3993935 + NC_016948.1 Mycobacterium paraintracellulare
247 2073714 2073908 - NZ_AP022618.1 Mycolicibacterium insubricum
248 3185062 3185256 + NZ_AP022612.1 Mycolicibacterium confluentis
249 505554 505748 + NZ_AP022615.1 Mycobacterium heidelbergense
250 2773017 2773208 + NC_019903.1 Desulfitobacterium dichloroeliminans LMG P-21439
251 2325919 2326110 + NZ_CP007032.1 Desulfitobacterium metallireducens DSM 15288
252 3122061 3122255 + NZ_AP022581.1 Mycobacterium lacus
253 2503137 2503325 - NZ_AP019307.1 Nocardioides baekrokdamisoli
254 3290355 3290546 + NC_018017.1 Desulfitobacterium dehalogenans ATCC 51507
255 4078588 4078779 + NC_011830.1 Desulfitobacterium hafniense DCB-2
256 2234165 2234356 + NZ_AP022609.1 Mycolicibacter hiberniae
257 2441646 2441867 - NZ_CP011454.1 Gemmatimonas phototrophica
++ More..