Result : C0H462
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein YrzR |
| NCBI Accession ID | AL009126.3 |
| Organism | Bacillus subtilis (strain 168) |
| Left | 2805501 |
| Right | 2805692 |
| Strand | - |
| Nucleotide Sequence | ATGCTTATATGCCCGAATTGCAAAAGTAAGGATATCGGCAAAATCGGCGTGAACCAATATTATTGCTGGGGCTGTTTTATTGAACTGACAGTGGCGAAAGGGAAGATTGCAACTCATCAGGTGGAAGAAGACGGAACGTTAAGCAGCTTGGATGATTTGTTTTCTGAGGATGAACGCAGCATCAATTTTTAA |
| Sequence | MLICPNCKSKDIGKIGVNQYYCWGCFIELTVAKGKIATHQVEEDGTLSSLDDLFSEDERSINF |
| Source of smORF | Swiss-Prot |
| Function | |
| Pubmed ID | 9384377 |
| Domain | |
| Functional Category | Others |
| Uniprot ID | C0H462 |
| ORF Length (Amino Acid) | 63 |
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| Conservation Analysis |
No. of Species: 111
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2686083 | 2686274 | - | NZ_CP033052.1 | Bacillus vallismortis |
| 2 | 2620746 | 2620937 | - | NZ_CP048852.1 | Bacillus tequilensis |
| 3 | 2613027 | 2613218 | - | NZ_CP034943.1 | Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 |
| 4 | 2638267 | 2638458 | - | NZ_CP013984.1 | Bacillus inaquosorum |
| 5 | 2805501 | 2805692 | - | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 6 | 1336248 | 1336439 | + | NZ_CP011937.1 | Bacillus velezensis |
| 7 | 2651596 | 2651787 | - | NZ_CP053376.1 | Bacillus amyloliquefaciens |
| 8 | 2538737 | 2538928 | - | NZ_CP051464.1 | Bacillus mojavensis |
| 9 | 3491864 | 3492055 | + | NZ_CP029364.1 | Bacillus halotolerans |
| 10 | 2951185 | 2951376 | - | NZ_CP023665.1 | Bacillus paralicheniformis |
| 11 | 2963336 | 2963527 | + | NZ_CP017786.1 | Bacillus xiamenensis |
| 12 | 3098326 | 3098517 | - | NZ_LT603683.1 | Bacillus glycinifermentans |
| 13 | 2760489 | 2760680 | - | NC_006270.3 | Bacillus licheniformis DSM 13 = ATCC 14580 |
| 14 | 2427057 | 2427248 | - | NZ_CP011150.1 | Bacillus altitudinis |
| 15 | 2877423 | 2877614 | + | NZ_CP043404.1 | Bacillus safensis |
| 16 | 1251648 | 1251839 | + | NZ_CP016020.1 | Bacillus weihaiensis |
| 17 | 3186897 | 3187091 | - | NZ_CP018866.1 | Sutcliffiella cohnii |
| 18 | 4367600 | 4367791 | - | NZ_CP024035.1 | Priestia aryabhattai |
| 19 | 2198223 | 2198414 | - | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 20 | 2023946 | 2024137 | - | NZ_CP012152.1 | Anoxybacillus gonensis |
| 21 | 3854269 | 3854454 | - | NZ_CP017703.1 | Aeribacillus pallidus |
| 22 | 1001240 | 1001428 | + | NZ_CP040336.1 | Bacillus luti |
| 23 | 4197790 | 4197978 | - | NC_007530.2 | Bacillus anthracis str. 'Ames Ancestor' |
| 24 | 4232779 | 4232967 | - | NZ_CP064875.1 | Bacillus toyonensis |
| 25 | 4369070 | 4369258 | - | NC_011725.1 | Bacillus cereus B4264 |
| 26 | 4407572 | 4407760 | - | NZ_CP032365.1 | Bacillus wiedmannii |
| 27 | 1387808 | 1387999 | + | NZ_CP070511.1 | Parageobacillus toebii |
| 28 | 3492699 | 3492887 | - | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 29 | 710985 | 711176 | + | NZ_CP014342.1 | Geobacillus subterraneus |
| 30 | 2571438 | 2571629 | - | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 31 | 1774531 | 1774722 | - | NZ_CP061470.1 | Geobacillus zalihae |
| 32 | 3364024 | 3364215 | + | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 33 | 3421626 | 3421817 | - | NC_022524.1 | Bacillus infantis NRRL B-14911 |
| 34 | 3141442 | 3141630 | - | NZ_CP024109.1 | Bacillus cytotoxicus |
| 35 | 1349846 | 1350037 | + | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 36 | 2669731 | 2669922 | - | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 37 | 3306251 | 3306442 | + | NZ_CP041305.1 | Cytobacillus ciccensis |
| 38 | 3465016 | 3465207 | - | NZ_CP042593.1 | Bacillus dafuensis |
| 39 | 3584617 | 3584805 | - | NZ_CP053989.1 | Niallia circulans |
| 40 | 2581636 | 2581830 | - | NZ_CP023704.1 | Caldibacillus thermoamylovorans |
| 41 | 3413442 | 3413633 | + | NZ_CP022983.1 | Cytobacillus kochii |
| 42 | 2329584 | 2329772 | - | NZ_CP012024.1 | Bacillus smithii |
| 43 | 3994557 | 3994745 | + | NZ_CP068053.1 | Peribacillus psychrosaccharolyticus |
| 44 | 824465 | 824650 | - | NZ_CP009709.1 | Weizmannia coagulans DSM 1 = ATCC 7050 |
| 45 | 1561677 | 1561865 | + | NZ_CP065425.1 | Heyndrickxia vini |
| 46 | 788137 | 788331 | - | NZ_CP030926.1 | Peribacillus butanolivorans |
| 47 | 4372227 | 4372421 | + | NZ_CP017704.1 | Peribacillus simplex NBRC 15720 = DSM 1321 |
| 48 | 1631766 | 1631954 | + | NZ_LS483476.1 | Lederbergia lentus |
| 49 | 1165234 | 1165425 | - | NZ_CP013862.1 | Lentibacillus amyloliquefaciens |
| 50 | 1361070 | 1361258 | + | NC_002570.2 | Alkalihalobacillus halodurans C-125 |
| 51 | 179844 | 180035 | - | NZ_CP063356.1 | Anaerobacillus isosaccharinicus |
| 52 | 5065105 | 5065314 | - | NZ_CP034346.1 | Paenibacillus lutimineralis |
| 53 | 277804 | 278007 | + | NZ_CP035492.1 | Paenibacillus protaetiae |
| 54 | 746759 | 746953 | + | NZ_AP019308.1 | Paenibacillus baekrokdamisoli |
| 55 | 4506175 | 4506369 | - | NZ_CP048209.1 | Paenibacillus lycopersici |
| 56 | 6226508 | 6226702 | + | NZ_CP048286.1 | Paenibacillus rhizovicinus |
| 57 | 1842324 | 1842524 | - | NZ_CP048286.1 | Paenibacillus rhizovicinus |
| 58 | 7218760 | 7218957 | - | NC_017672.3 | Paenibacillus mucilaginosus K02 |
| 59 | 3200300 | 3200497 | + | NZ_CP011388.1 | Paenibacillus swuensis |
| 60 | 1836112 | 1836312 | - | NZ_CP008876.1 | Terribacillus goriensis |
| 61 | 5320530 | 5320739 | - | NZ_CP009428.1 | Paenibacillus odorifer |
| 62 | 2734117 | 2734314 | - | NZ_CP013652.1 | Paenibacillus naphthalenovorans |
| 63 | 2894794 | 2895006 | - | NZ_CP014167.1 | Paenibacillus yonginensis |
| 64 | 2844377 | 2844574 | - | NZ_CP015378.1 | Fictibacillus phosphorivorans |
| 65 | 5039685 | 5039879 | - | NZ_CP034437.1 | Paenibacillus albus |
| 66 | 1611673 | 1611861 | + | NZ_CP017962.1 | Virgibacillus halodenitrificans |
| 67 | 3997050 | 3997253 | + | NZ_CP011058.1 | Paenibacillus beijingensis |
| 68 | 5292922 | 5293119 | - | NZ_CP026520.1 | Paenibacillus chitinolyticus |
| 69 | 2099254 | 2099442 | - | NZ_CP041666.1 | Radiobacillus deserti |
| 70 | 4653041 | 4653247 | - | NZ_CP013023.1 | Paenibacillus bovis |
| 71 | 1523259 | 1523468 | - | NZ_CP016809.1 | Paenibacillus ihbetae |
| 72 | 6334213 | 6334422 | - | NZ_CP009285.1 | Paenibacillus borealis |
| 73 | 191165 | 191377 | + | NZ_CP045293.1 | Paenibacillus guangzhouensis |
| 74 | 2339936 | 2340124 | - | NZ_CP029797.1 | Paraliobacillus zengyii |
| 75 | 304272 | 304481 | - | NZ_CP048429.1 | Paenibacillus jilunlii |
| 76 | 5572893 | 5573102 | - | NZ_CP009287.1 | Paenibacillus graminis |
| 77 | 6123326 | 6123535 | - | NZ_LN831776.1 | Paenibacillus riograndensis SBR5 |
| 78 | 5338130 | 5338339 | - | NZ_CP021780.1 | Paenibacillus donghaensis |
| 79 | 2387684 | 2387896 | + | NZ_CP034248.1 | Paenibacillus lentus |
| 80 | 2598998 | 2599192 | + | NZ_CP034235.1 | Paenibacillus psychroresistens |
| 81 | 2729156 | 2729353 | - | NZ_CP048103.1 | Kroppenstedtia eburnea |
| 82 | 6023320 | 6023532 | - | NC_016641.1 | Paenibacillus terrae HPL-003 |
| 83 | 4904932 | 4905141 | - | NZ_CP043611.1 | Paenibacillus antarcticus |
| 84 | 879008 | 879220 | - | NZ_CP045298.1 | Paenibacillus brasilensis |
| 85 | 1447094 | 1447306 | + | NZ_CP020028.1 | Paenibacillus kribbensis |
| 86 | 2275264 | 2275473 | - | NZ_CP054614.1 | Paenibacillus barcinonensis |
| 87 | 4702446 | 4702652 | - | NZ_AP019400.1 | Cohnella abietis |
| 88 | 1702684 | 1702890 | - | NZ_CP045295.1 | Paenibacillus cellulositrophicus |
| 89 | 3393765 | 3393959 | + | NZ_CP018622.1 | Virgibacillus dokdonensis |
| 90 | 4531858 | 4532067 | - | NZ_CP009288.1 | Paenibacillus durus |
| 91 | 2592501 | 2592701 | - | NC_019897.1 | Thermobacillus composti KWC4 |
| 92 | 3060848 | 3061042 | - | NZ_CP019659.1 | Paenibacillus larvae subsp. larvae |
| 93 | 2060986 | 2061183 | - | NZ_AP021853.1 | Sporolactobacillus terrae |
| 94 | 3956077 | 3956283 | - | NZ_CP026363.1 | Brevibacillus agri |
| 95 | 4198878 | 4199084 | - | NZ_LR134338.1 | Brevibacillus brevis |
| 96 | 1929187 | 1929375 | + | NZ_CP022437.1 | Virgibacillus necropolis |
| 97 | 1720708 | 1720899 | + | NC_014829.1 | Evansella cellulosilytica DSM 2522 |
| 98 | 931560 | 931766 | - | NZ_CP041217.1 | Saccharibacillus brassicae |
| 99 | 2840504 | 2840692 | + | NZ_CP022315.1 | Virgibacillus phasianinus |
| 100 | 1036525 | 1036722 | + | NZ_CP019699.1 | Novibacillus thermophilus |
| 101 | 2035280 | 2035465 | - | NC_004193.1 | Oceanobacillus iheyensis HTE831 |
| 102 | 2297748 | 2297933 | - | NZ_CP024848.1 | Oceanobacillus zhaokaii |
| 103 | 3609320 | 3609517 | + | NZ_CP017705.1 | Brevibacillus laterosporus DSM 25 |
| 104 | 896128 | 896328 | + | NZ_CP039710.1 | Thermoactinomyces vulgaris |
| 105 | 1872664 | 1872840 | + | NZ_CP020772.1 | Halobacillus mangrovi |
| 106 | 2493266 | 2493466 | - | NZ_CP048104.1 | Kroppenstedtia pulmonis |
| 107 | 1197519 | 1197722 | + | NZ_AP017312.1 | Aneurinibacillus soli |
| 108 | 2574108 | 2574293 | - | NC_017668.1 | Halobacillus halophilus DSM 2266 |
| 109 | 1953603 | 1953803 | - | NZ_CP034118.1 | Staphylospora marina |
| 110 | 1118065 | 1118250 | + | NC_018704.1 | Amphibacillus xylanus NBRC 15112 |
| 111 | 360140 | 360313 | + | NC_014220.1 | Syntrophothermus lipocalidus DSM 12680 |
| 112 | 1648950 | 1649108 | - | NZ_CP017237.1 | Moorella thermoacetica |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP033052.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF03652.17 | 0.66 | 73 | 4661 | same-strand | Holliday junction resolvase |
| 2 | PF06135.14 | 0.76 | 84 | 4389.5 | same-strand | IreB regulatory phosphoprotein |
| 3 | PF01411.21 | 0.8 | 89 | 1666 | same-strand | tRNA synthetases class II (A) |
| 4 | PF02272.21 | 0.8 | 89 | 1666 | same-strand | DHHA1 domain |
| 5 | PF07973.16 | 0.8 | 89 | 1666 | same-strand | Threonyl and Alanyl tRNA synthetase second additional domain |
| 6 | PF01594.18 | 0.86 | 96 | 239.0 | same-strand | AI-2E family transporter |
| 7 | PF05239.18 | 0.64 | 71 | 15 | same-strand | PRC-barrel domain |
| 8 | PF13604.8 | 0.65 | 72 | 531.0 | same-strand | AAA domain |
| 9 | PF13245.8 | 0.65 | 72 | 531.0 | same-strand | AAA domain |
| 10 | PF14490.8 | 0.66 | 73 | 533 | same-strand | Helix-hairpin-helix containing domain |
| 11 | PF18335.3 | 0.66 | 73 | 529 | same-strand | ATP-dependent RecD-like DNA helicase SH3 domain |
| 12 | PF13538.8 | 0.66 | 73 | 529 | same-strand | UvrD-like helicase C-terminal domain |
| 13 | PF03054.18 | 0.8 | 89 | 3342 | same-strand | tRNA methyl transferase |
| 14 | PF00266.21 | 0.86 | 96 | 4365.5 | same-strand | Aminotransferase class-V |
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