Result : EXP04252
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP04252 |
| NCBI Accession ID | NC_004663.1 |
| Organism | Bacteroides thetaiotaomicron VPI-5482 |
| Left | 1126423 |
| Right | 1126581 |
| Strand | - |
| Nucleotide Sequence | ATGGCAAAGAAAACAGTAGCAAGTTTGCACGAAGGCTCTAAAGAAGGTCGTGCTTACACCAAGGTTATCAAAATGGTGAAATCTCCGAAAACTGGAGCTTACGTTTTTGATGAACAAATGGTTGCAAACGAAAAAGTACAAGACTTTTTCAAAAAATAA |
| Sequence | MAKKTVASLHEGSKEGRAYTKVIKMVKSPKTGAYVFDEQMVANEKVQDFFKK |
| Source of smORF | Protein-level |
| Function | |
| Pubmed ID | 31402174 |
| Domain | |
| Functional Category | Function not yet assigned |
| Uniprot ID | |
| ORF Length (Amino Acid) | 52 |
++ More..
| Conservation Analysis |
No. of Species: 207
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 4704519 | 4704677 | - | NZ_CP040530.1 | Bacteroides thetaiotaomicron |
| 2 | 914913 | 915071 | + | NZ_CP012938.1 | Bacteroides ovatus |
| 3 | 1994477 | 1994635 | + | NZ_CP015401.2 | Bacteroides caecimuris |
| 4 | 2843094 | 2843252 | - | NZ_LN877293.1 | Bacteroides fragilis |
| 5 | 2773911 | 2774069 | + | NC_014933.1 | Bacteroides helcogenes P 36-108 |
| 6 | 1079640 | 1079798 | - | NZ_CP027234.1 | Bacteroides heparinolyticus |
| 7 | 458432 | 458590 | - | NZ_CP027231.1 | Bacteroides zoogleoformans |
| 8 | 882667 | 882825 | + | NC_014033.1 | Prevotella ruminicola 23 |
| 9 | 2013356 | 2013514 | - | NZ_LR134384.1 | Prevotella oris |
| 10 | 505448 | 505606 | - | NZ_CP012075.1 | Prevotella fusca JCM 17724 |
| 11 | 550530 | 550688 | + | NZ_CP013195.1 | Prevotella enoeca |
| 12 | 527383 | 527541 | + | NZ_CP024728.1 | Prevotella intermedia |
| 13 | 617071 | 617226 | + | NC_015164.1 | Phocaeicola salanitronis DSM 18170 |
| 14 | 4111321 | 4111476 | + | NC_009614.1 | Phocaeicola vulgatus ATCC 8482 |
| 15 | 4519425 | 4519580 | + | NZ_LR699004.1 | Phocaeicola dorei |
| 16 | 1392172 | 1392327 | + | NZ_CP069440.1 | Phocaeicola coprophilus |
| 17 | 476020 | 476178 | - | NC_014371.1 | Prevotella melaninogenica ATCC 25845 |
| 18 | 417095 | 417253 | + | NZ_CP023864.1 | Prevotella jejuni |
| 19 | 612248 | 612406 | + | NZ_LR215980.1 | Paraprevotella xylaniphila YIT 11841 |
| 20 | 2977028 | 2977180 | + | NZ_CP007034.1 | Barnesiella viscericola DSM 18177 |
| 21 | 2116651 | 2116803 | + | NC_015501.1 | Porphyromonas asaccharolytica DSM 20707 |
| 22 | 2107357 | 2107506 | - | NC_010729.1 | Porphyromonas gingivalis ATCC 33277 |
| 23 | 5077667 | 5077819 | + | NZ_AP018042.1 | Labilibaculum antarcticum |
| 24 | 3229210 | 3229359 | + | NZ_CP045696.1 | Sodaliphilus pleomorphus |
| 25 | 1421735 | 1421887 | - | NC_014734.1 | Paludibacter propionicigenes WB4 |
| 26 | 1224071 | 1224223 | + | NZ_CP054012.1 | Parabacteroides distasonis |
| 27 | 582686 | 582835 | + | NZ_CP015402.2 | Muribaculum intestinale |
| 28 | 1146679 | 1146840 | + | NZ_LT608328.1 | Petrimonas mucosa |
| 29 | 994015 | 994170 | + | NZ_LR134506.1 | Porphyromonas cangingivalis |
| 30 | 1036265 | 1036417 | - | NZ_LT906459.1 | Odoribacter splanchnicus |
| 31 | 1988765 | 1988914 | - | NZ_LS483447.1 | Porphyromonas crevioricanis |
| 32 | 870594 | 870755 | + | NZ_LT605205.1 | Proteiniphilum saccharofermentans |
| 33 | 876404 | 876556 | - | NZ_CP032819.1 | Butyricimonas faecalis |
| 34 | 1542172 | 1542321 | - | NZ_LR134404.1 | Weeksella virosa |
| 35 | 4335761 | 4335913 | + | NZ_CP007451.1 | Draconibacterium orientale |
| 36 | 333323 | 333478 | + | NZ_AP023049.1 | Alistipes indistinctus |
| 37 | 3966186 | 3966338 | + | NZ_CP012898.1 | Algibacter alginicilyticus |
| 38 | 3221624 | 3221776 | - | NZ_CP069450.1 | Butyricimonas virosa |
| 39 | 4804477 | 4804632 | - | NZ_CP013118.1 | Salinivirga cyanobacteriivorans |
| 40 | 4362037 | 4362192 | - | NZ_CP021904.1 | Alkalitalea saponilacus |
| 41 | 1700765 | 1700923 | - | NZ_LR027382.1 | Alistipes megaguti |
| 42 | 2262528 | 2262680 | + | NC_018013.1 | Aequorivita sublithincola DSM 14238 |
| 43 | 3934493 | 3934645 | - | NZ_CP042831.1 | Flavobacterium alkalisoli |
| 44 | 1348891 | 1349043 | - | NZ_CP025791.1 | Flavivirga eckloniae |
| 45 | 354990 | 355142 | - | NZ_CP025938.1 | Tamlana carrageenivorans |
| 46 | 578841 | 578993 | - | NZ_CP039456.1 | Changchengzhania lutea |
| 47 | 1289163 | 1289312 | - | NZ_CP018153.1 | Gramella salexigens |
| 48 | 3189144 | 3189296 | - | NZ_CP047984.1 | Pontibacter russatus |
| 49 | 1160878 | 1161030 | + | NZ_CP053348.1 | Winogradskyella forsetii |
| 50 | 1847818 | 1847970 | + | NZ_CP053352.1 | Winogradskyella helgolandensis |
| 51 | 1083820 | 1083972 | + | NZ_CP053351.1 | Winogradskyella schleiferi |
| 52 | 938779 | 938937 | + | NZ_AP019736.1 | Alistipes dispar |
| 53 | 2388117 | 2388266 | - | NC_008571.1 | Gramella forsetii KT0803 |
| 54 | 22856 | 23005 | - | NZ_CP013210.1 | Empedobacter brevis |
| 55 | 6019775 | 6019927 | - | NC_009441.1 | Flavobacterium johnsoniae UW101 |
| 56 | 1531634 | 1531786 | + | NZ_CP007202.1 | Siansivirga zeaxanthinifaciens CC-SAMT-1 |
| 57 | 1718148 | 1718300 | - | NZ_CP042476.1 | Antarcticibacterium arcticum |
| 58 | 330042 | 330194 | - | NZ_CP017774.1 | Flavobacterium commune |
| 59 | 3574385 | 3574537 | + | NZ_CP040812.1 | Antarcticibacterium flavum |
| 60 | 1693248 | 1693400 | - | NZ_CP019342.1 | Nonlabens tegetincola |
| 61 | 2932236 | 2932388 | - | NC_014230.1 | Croceibacter atlanticus HTCC2559 |
| 62 | 3075597 | 3075749 | - | NZ_CP015125.1 | Dokdonia donghaensis DSW-1 |
| 63 | 4126115 | 4126267 | - | NZ_CP017479.1 | Flavobacterium gilvum |
| 64 | 3659390 | 3659542 | + | NZ_CP021235.1 | Pontibacter actiniarum |
| 65 | 2894744 | 2894896 | + | NZ_CP016907.1 | Flavobacterium anhuiense |
| 66 | 2830114 | 2830266 | + | NZ_CP043612.1 | Flavobacterium nitrogenifigens |
| 67 | 5794492 | 5794644 | - | NZ_CP029255.1 | Flavobacterium crocinum |
| 68 | 2185065 | 2185214 | + | NZ_CP061703.1 | Mesoflavibacter profundi |
| 69 | 1352984 | 1353133 | + | NC_014041.1 | Zunongwangia profunda SM-A87 |
| 70 | 4917951 | 4918100 | + | NZ_CP019288.1 | Kordia antarctica |
| 71 | 1629680 | 1629832 | + | NZ_CP041345.1 | Tenuifilum thalassicum |
| 72 | 2613948 | 2614100 | + | NZ_CP028136.1 | Gramella fulva |
| 73 | 2193304 | 2193456 | + | NZ_CP020918.1 | Flavobacterium faecale |
| 74 | 2465202 | 2465354 | + | NC_016001.1 | Flavobacterium branchiophilum FL-15 |
| 75 | 1539053 | 1539205 | - | NZ_CP037933.1 | Flavobacterium nackdongense |
| 76 | 498381 | 498530 | + | NZ_CP040908.1 | Empedobacter falsenii |
| 77 | 940621 | 940773 | + | NZ_CP063145.1 | Cruoricaptor ignavus |
| 78 | 662043 | 662195 | - | NZ_CP006828.1 | Ornithobacterium rhinotracheale ORT-UMN 88 |
| 79 | 2354186 | 2354347 | - | NZ_CP066775.1 | Mucilaginibacter ginkgonis |
| 80 | 1399660 | 1399812 | + | NZ_CP034549.1 | Nonlabens ponticola |
| 81 | 2779897 | 2780052 | - | NZ_CP034120.1 | Glaciecola amylolytica |
| 82 | 678255 | 678407 | - | NZ_LT906449.1 | Capnocytophaga haemolytica |
| 83 | 1499573 | 1499725 | + | NZ_CP034930.1 | Apibacter raozihei |
| 84 | 2273956 | 2274114 | - | NC_018011.1 | Alistipes finegoldii DSM 17242 |
| 85 | 3910986 | 3911141 | + | NZ_CP054139.1 | Mucilaginibacter mali |
| 86 | 5468693 | 5468854 | - | NZ_AP017313.1 | Mucilaginibacter gotjawali |
| 87 | 2053959 | 2054111 | - | NZ_LT906465.1 | Chryseobacterium taklimakanense |
| 88 | 3338005 | 3338157 | + | NZ_CP047897.1 | Nibribacter ruber |
| 89 | 3903569 | 3903721 | - | NZ_CP010777.1 | Rufibacter radiotolerans |
| 90 | 1604161 | 1604313 | - | NZ_CP012643.1 | Rufibacter tibetensis |
| 91 | 140682 | 140831 | + | NZ_CP053698.1 | Empedobacter stercoris |
| 92 | 969590 | 969748 | - | NZ_AP019735.1 | Alistipes communis |
| 93 | 32833 | 32985 | - | NZ_CP031188.1 | Flavobacterium arcticum |
| 94 | 2557250 | 2557402 | + | NC_013162.1 | Capnocytophaga ochracea DSM 7271 |
| 95 | 3821528 | 3821680 | - | NZ_CP020919.1 | Flavobacterium kingsejongi |
| 96 | 235221 | 235373 | - | NZ_CP054494.1 | Flavobacterium columnare |
| 97 | 3967469 | 3967621 | - | NZ_CP029186.1 | Flavobacterium album |
| 98 | 3097832 | 3097984 | + | NC_015321.1 | Fluviicola taffensis DSM 16823 |
| 99 | 4321480 | 4321635 | + | NZ_CP060723.1 | Pedobacter roseus |
| 100 | 1934946 | 1935098 | + | NZ_CP028811.1 | Flavobacterium magnum |
| 101 | 2064295 | 2064447 | + | NZ_CP029187.1 | Flavobacterium pallidum |
| 102 | 497609 | 497761 | - | NZ_CP022379.1 | Capnocytophaga sputigena |
| 103 | 2506483 | 2506635 | - | NZ_CP022022.1 | Capnocytophaga endodontalis |
| 104 | 3300598 | 3300750 | + | NZ_CP022957.1 | Maribacter cobaltidurans |
| 105 | 1642978 | 1643130 | + | NZ_CP032050.1 | Euzebyella marina |
| 106 | 850251 | 850406 | - | NZ_CP055156.1 | Adhaeribacter swui |
| 107 | 1274508 | 1274663 | - | NZ_CP009621.1 | Pontibacter korlensis |
| 108 | 449154 | 449306 | - | NZ_CP058595.1 | Costertonia aggregata |
| 109 | 3376600 | 3376752 | - | NZ_CP010817.1 | Myroides profundi |
| 110 | 2887782 | 2887934 | + | NZ_CP016359.1 | Gramella flava JLT2011 |
| 111 | 2206574 | 2206726 | + | NZ_CP009976.1 | Cellulophaga baltica 18 |
| 112 | 1739914 | 1740069 | - | NZ_CP014766.1 | Pontibacter akesuensis |
| 113 | 2805834 | 2805986 | + | NZ_CP030104.1 | Flagellimonas maritima |
| 114 | 868274 | 868426 | - | NZ_CP013355.1 | Lutibacter profundi |
| 115 | 4258321 | 4258479 | - | NZ_CP042437.1 | Mucilaginibacter ginsenosidivorax |
| 116 | 4699421 | 4699576 | - | NZ_CP029480.1 | Arcticibacterium luteifluviistationis |
| 117 | 3402226 | 3402384 | + | NC_017770.1 | Solitalea canadensis DSM 3403 |
| 118 | 2095532 | 2095684 | - | NZ_CP022378.1 | Capnocytophaga cynodegmi |
| 119 | 2140392 | 2140544 | - | NZ_CP020822.1 | Tenacibaculum maritimum |
| 120 | 524657 | 524809 | - | NC_015167.1 | Cellulophaga lytica DSM 7489 |
| 121 | 886632 | 886787 | + | NZ_CP055153.1 | Adhaeribacter radiodurans |
| 122 | 1434946 | 1435098 | + | NZ_CP017688.1 | Flavobacterium crassostreae |
| 123 | 2853451 | 2853606 | + | NZ_LR134441.1 | Kaistella antarctica |
| 124 | 2419418 | 2419570 | + | NC_015945.1 | Muricauda ruestringensis DSM 13258 |
| 125 | 2808957 | 2809109 | + | NC_018721.1 | Psychroflexus torquis ATCC 700755 |
| 126 | 2769125 | 2769277 | + | NC_014934.1 | Cellulophaga algicola DSM 14237 |
| 127 | 2455476 | 2455628 | + | NC_020156.1 | Nonlabens dokdonensis DSW-6 |
| 128 | 4869816 | 4869977 | + | NZ_CP022743.1 | Mucilaginibacter xinganensis |
| 129 | 3215590 | 3215742 | - | NC_013222.1 | Robiginitalea biformata HTCC2501 |
| 130 | 3072540 | 3072692 | - | NZ_CP048106.1 | Pontibacter pudoricolor |
| 131 | 4398314 | 4398478 | + | NZ_CP071878.1 | Mucilaginibacter gossypii |
| 132 | 1129659 | 1129820 | + | NZ_CP048222.1 | Rhodocytophaga rosea |
| 133 | 3577277 | 3577438 | + | NZ_CP024091.1 | Pedobacter ginsengisoli |
| 134 | 2853861 | 2854022 | - | NZ_CP032317.1 | Hymenobacter oligotrophus |
| 135 | 631830 | 631982 | + | NZ_CP022387.1 | Capnocytophaga stomatis |
| 136 | 2509535 | 2509687 | + | NZ_CP029463.1 | Flavobacterium sediminis |
| 137 | 2025091 | 2025243 | + | NZ_CP041637.1 | Formosa sediminum |
| 138 | 2641362 | 2641514 | + | NZ_CP019419.1 | Polaribacter reichenbachii |
| 139 | 1892790 | 1892942 | + | NZ_CP038810.1 | Flavobacterium sangjuense |
| 140 | 5578261 | 5578416 | - | NZ_CP014263.1 | Spirosoma montaniterrae |
| 141 | 2356496 | 2356648 | - | NZ_CP019352.1 | Lacinutrix venerupis |
| 142 | 163675 | 163824 | + | NZ_CP033932.1 | Chryseobacterium bernardetii |
| 143 | 4773256 | 4773405 | + | NZ_LR134386.1 | Chryseobacterium nakagawai |
| 144 | 678653 | 678805 | - | NZ_CP022386.1 | Capnocytophaga gingivalis |
| 145 | 2186523 | 2186687 | + | NZ_CP042436.1 | Mucilaginibacter ginsenosidivorans |
| 146 | 3703211 | 3703363 | - | NZ_LT899436.1 | Tenacibaculum jejuense |
| 147 | 1369704 | 1369853 | - | NC_016599.1 | Owenweeksia hongkongensis DSM 17368 |
| 148 | 587735 | 587887 | - | NZ_CP039934.1 | Myroides fluvii |
| 149 | 1685486 | 1685641 | - | NZ_CP034159.1 | Kaistella carnis |
| 150 | 1603251 | 1603406 | - | NZ_LR134503.1 | Kaistella jeonii |
| 151 | 31122 | 31283 | + | NZ_CP030848.1 | Sphingobacterium hotanense |
| 152 | 3406477 | 3406626 | + | NZ_CP015067.2 | Elizabethkingia anophelis |
| 153 | 3260709 | 3260858 | - | NZ_CP014337.1 | Elizabethkingia bruuniana |
| 154 | 304868 | 305029 | + | NZ_CP037922.1 | Hymenobacter radiodurans |
| 155 | 1619529 | 1619684 | - | NZ_CP020105.1 | Spirosoma rigui |
| 156 | 33496 | 33651 | + | NZ_CP050063.1 | Spirosoma aureum |
| 157 | 2463336 | 2463488 | + | NZ_CP011071.1 | Muricauda lutaonensis |
| 158 | 2092056 | 2092217 | - | NZ_CP050954.1 | Hymenobacter sp. BT18 |
| 159 | 3799047 | 3799199 | + | NZ_CP012836.1 | Algoriphagus sanaruensis |
| 160 | 5323087 | 5323242 | + | NZ_CP053435.1 | Spirosoma taeanense |
| 161 | 6366997 | 6367152 | + | NZ_CP010429.1 | Spirosoma radiotolerans |
| 162 | 3632545 | 3632700 | - | NZ_CP025096.1 | Spirosoma pollinicola |
| 163 | 1103510 | 1103662 | - | NZ_CP061813.1 | Polaribacter haliotis |
| 164 | 5283670 | 5283834 | + | NZ_CP032869.1 | Mucilaginibacter celer |
| 165 | 280837 | 280992 | - | NZ_CP020104.1 | Spirosoma aerolatum |
| 166 | 223648 | 223809 | + | NZ_CP038029.1 | Sphingobacterium psychroaquaticum |
| 167 | 227289 | 227441 | - | NC_018010.1 | Belliella baltica DSM 15883 |
| 168 | 1735876 | 1736043 | - | NZ_LR590484.1 | Sphingobacterium thalpophilum |
| 169 | 3109925 | 3110077 | + | NZ_CP012040.1 | Cyclobacterium amurskyense |
| 170 | 2401101 | 2401262 | + | NZ_CP040896.1 | Hymenobacter jejuensis |
| 171 | 784390 | 784542 | - | NZ_CP022389.1 | Capnocytophaga canimorsus |
| 172 | 31431 | 31592 | + | NZ_LR590470.1 | Sphingobacterium daejeonense |
| 173 | 4406974 | 4407126 | - | NC_013037.1 | Dyadobacter fermentans DSM 18053 |
| 174 | 2162676 | 2162828 | - | NC_017025.1 | Flavobacterium indicum GPTSA100-9 = DSM 17447 |
| 175 | 820266 | 820427 | + | NZ_CP049246.1 | Sphingobacterium lactis |
| 176 | 3077933 | 3078088 | + | NZ_CP034161.1 | Epilithonimonas vandammei |
| 177 | 4851426 | 4851578 | + | NZ_CP034562.1 | Flammeovirga pectinis |
| 178 | 106311 | 106463 | + | NZ_CP017478.1 | Urechidicola croceus |
| 179 | 3814332 | 3814484 | + | NZ_CP033929.1 | Chryseobacterium indoltheticum |
| 180 | 4148344 | 4148496 | - | NZ_CP050995.1 | Chryseobacterium gallinarum |
| 181 | 1910956 | 1911108 | + | NZ_CP022986.1 | Chryseobacterium camelliae |
| 182 | 3533226 | 3533378 | + | NZ_CP033914.1 | Chryseobacterium shandongense |
| 183 | 4155290 | 4155442 | - | NZ_CP023049.2 | Chryseobacterium piperi |
| 184 | 2299033 | 2299185 | + | NZ_CP033926.1 | Chryseobacterium joostei |
| 185 | 2376894 | 2377046 | - | NZ_CP033920.1 | Chryseobacterium carnipullorum |
| 186 | 2628485 | 2628637 | + | NZ_LR134289.1 | Chryseobacterium gleum |
| 187 | 515603 | 515755 | + | NZ_CP018155.1 | Tenacibaculum todarodis |
| 188 | 1487669 | 1487818 | + | NC_017045.1 | Riemerella anatipestifer ATCC 11845 = DSM 15868 |
| 189 | 4511771 | 4511932 | - | NZ_CP007145.1 | Hymenobacter swuensis DY53 |
| 190 | 2225020 | 2225175 | + | NZ_CP032382.1 | Chryseolinea soli |
| 191 | 3724319 | 3724483 | + | NZ_CP029145.1 | Hymenobacter nivis |
| 192 | 1825210 | 1825374 | + | NZ_CP013909.1 | Hymenobacter sedentarius |
| 193 | 1743263 | 1743415 | + | NC_015703.1 | Runella slithyformis DSM 19594 |
| 194 | 4192306 | 4192464 | + | NC_013061.1 | Pedobacter heparinus DSM 2366 |
| 195 | 3100000 | 3100152 | + | NC_015914.1 | Cyclobacterium marinum DSM 745 |
| 196 | 732659 | 732811 | - | NC_015844.1 | Zobellia galactanivorans |
| 197 | 3393357 | 3393506 | - | NZ_LR215974.1 | Chryseobacterium taihuense |
| 198 | 1079051 | 1079209 | + | NZ_CP044285.1 | Hymenobacter baengnokdamensis |
| 199 | 652641 | 652793 | - | NC_019904.1 | Echinicola vietnamensis DSM 17526 |
| 200 | 565564 | 565716 | - | NZ_CP040106.1 | Echinicola rosea |
| 201 | 2405006 | 2405158 | - | NZ_CP030041.1 | Echinicola strongylocentroti |
| 202 | 1051354 | 1051518 | + | NZ_AP014564.1 | Ichthyobacterium seriolicida |
| 203 | 3743363 | 3743515 | + | NZ_CP017477.1 | Polaribacter vadi |
| 204 | 319840 | 320010 | - | NC_015177.1 | Pseudopedobacter saltans DSM 12145 |
| 205 | 427155 | 427307 | + | NZ_CP014224.1 | Wenyingzhuangia fucanilytica |
| 206 | 3270603 | 3270755 | - | NC_014655.1 | Leadbetterella byssophila DSM 17132 |
| 207 | 2409118 | 2409267 | - | NC_014759.1 | Marivirga tractuosa DSM 4126 |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP040530.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00448.24 | 0.9 | 186 | 158.0 | same-strand | SRP54-type protein, GTPase domain |
| 2 | PF02881.21 | 0.9 | 186 | 156.0 | same-strand | SRP54-type protein, helical bundle domain |
| 3 | PF00471.22 | 0.99 | 204 | 20.0 | same-strand | Ribosomal protein L33 |
| 4 | PF00830.21 | 0.94 | 194 | 224.5 | same-strand | Ribosomal L28 family |
++ More..