* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP032621.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00521.22
|
1.0
|
2
|
2756.5
|
same-strand
|
DNA gyrase/topoisomerase IV, subunit A
|
2
|
PF03989.15
|
1.0
|
2
|
2756.5
|
same-strand
|
DNA gyrase C-terminal domain, beta-propeller
|
3
|
PF01063.21
|
1.0
|
2
|
1601.5
|
same-strand
|
Amino-transferase class IV
|
4
|
PF11184.10
|
1.0
|
2
|
270.5
|
same-strand
|
Protein of unknown function (DUF2969)
|
5
|
PF00575.25
|
1.0
|
2
|
25.5
|
same-strand
|
S1 RNA binding domain
|
6
|
PF13177.8
|
1.0
|
2
|
1809.0
|
same-strand
|
DNA polymerase III, delta subunit
|
7
|
PF00004.31
|
1.0
|
2
|
1809.0
|
same-strand
|
ATPase family associated with various cellular activities (AAA)
|
8
|
PF12169.10
|
1.0
|
2
|
1809.0
|
same-strand
|
DNA polymerase III subunits gamma and tau domain III
|
9
|
PF13401.8
|
1.0
|
2
|
1809.0
|
same-strand
|
AAA domain
|
10
|
PF00005.29
|
1.0
|
2
|
3838.5
|
same-strand
|
ABC transporter
|
11
|
PF02463.21
|
1.0
|
2
|
3838.5
|
same-strand
|
RecF/RecN/SMC N terminal domain
|
++ More..