ProsmORF-pred
Result : EXP04068
Protein Information
Information Type Description
Protein name EXP04068
NCBI Accession ID
Organism Paraburkholderia
Left
Right
Strand
Nucleotide Sequence ATGATCTCCTCGGAATTGCCGGAGATCGTCGGCTCGTGTGACCGGGTCGTCGTGATGGCACAGGGCAAGGTACAGGGAACCTTGGAAAAAGAAGAGATCCAATCTGAAAAGATTATGGCCCTAGCGGCAGATGGAGGAAGATAA
Sequence MISSELPEIVGSCDRVVVMAQGKVQGTLEKEEIQSEKIMALAADGGR
Source of smORF Metagenomic Ribo-seq
Function
Pubmed ID 32601270
Domain
Functional Category Function not yet assigned
Uniprot ID
ORF Length (Amino Acid) 47
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 418
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 1803996 1804160 - NZ_CP009831.1 Burkholderia multivorans ATCC BAA-247
2 2024390 2024545 - NZ_CP009831.1 Burkholderia multivorans ATCC BAA-247
3 2056916 2057080 - NZ_CP013403.1 Burkholderia metallica
4 2297371 2297526 - NZ_CP013403.1 Burkholderia metallica
5 2111294 2111458 + NZ_CP011504.1 Burkholderia pyrrocinia
6 1792512 1792667 + NZ_CP011504.1 Burkholderia pyrrocinia
7 2090108 2090245 - NZ_AP018712.1 Tepiditoga spiralis
8 2798050 2798187 + NZ_CP029256.1 Christensenella minuta
9 1816036 1816179 - NZ_CP029256.1 Christensenella minuta
10 2069548 2069694 - NZ_CP029256.1 Christensenella minuta
11 408520 408663 + NZ_CP029256.1 Christensenella minuta
12 1600592 1600738 - NZ_CP029256.1 Christensenella minuta
13 2086087 2086251 - NZ_CP013452.1 Burkholderia cenocepacia
14 2419907 2420062 - NZ_CP013452.1 Burkholderia cenocepacia
15 646689 646823 + NC_014614.1 Acetoanaerobium sticklandii
16 2542867 2543010 - NC_014614.1 Acetoanaerobium sticklandii
17 904788 904925 + NC_014614.1 Acetoanaerobium sticklandii
18 3274545 3274709 - NZ_CP024934.1 Paraburkholderia graminis
19 2695568 2695723 - NZ_CP024934.1 Paraburkholderia graminis
20 3301273 3301437 - NZ_CP024941.1 Paraburkholderia terricola
21 584494 584658 + NZ_CP009793.1 Burkholderia dolosa AU0158
22 399353 399508 + NZ_CP009793.1 Burkholderia dolosa AU0158
23 996032 996196 + NC_007511.1 Burkholderia lata
24 698499 698654 + NC_007511.1 Burkholderia lata
25 3149331 3149477 - NC_014393.1 Clostridium cellulovorans 743B
26 4621429 4621572 - NC_014393.1 Clostridium cellulovorans 743B
27 1396481 1396645 - NZ_CP031467.1 Paraburkholderia caffeinilytica
28 4440996 4441142 + NZ_CP031467.1 Paraburkholderia caffeinilytica
29 348183 348347 + NZ_CP045236.1 Burkholderia cepacia
30 62025 62180 + NZ_CP045236.1 Burkholderia cepacia
31 2976946 2977104 - NZ_CP019401.1 Planococcus faecalis
32 2285078 2285236 + NZ_CP013661.2 Planococcus kocurii
33 3498593 3498757 + NZ_CP041666.1 Radiobacillus deserti
34 2384947 2385087 - NZ_CP030926.1 Peribacillus butanolivorans
35 31460 31606 + NZ_CP020331.1 Martelella mediterranea DSM 17316
36 419038 419196 + NZ_CP020331.1 Martelella mediterranea DSM 17316
37 2991677 2991829 - NZ_CP004078.1 Paenibacillus sabinae T27
38 202698 202838 + NC_014720.1 Caldicellulosiruptor kronotskyensis 2002
39 130549 130689 + NC_012034.1 Caldicellulosiruptor bescii DSM 6725
40 2993304 2993462 + NZ_CP048000.1 Anaerocolumna sedimenticola
41 4928632 4928781 - NZ_CP048000.1 Anaerocolumna sedimenticola
42 3294834 3294989 + NZ_CP048000.1 Anaerocolumna sedimenticola
43 3643510 3643674 - NC_010681.1 Paraburkholderia phytofirmans PsJN
44 2912385 2912525 + NZ_CP068053.1 Peribacillus psychrosaccharolyticus
45 1713343 1713477 - NZ_CP068053.1 Peribacillus psychrosaccharolyticus
46 617968 618111 + NC_009633.1 Alkaliphilus metalliredigens QYMF
47 1059428 1059577 + NZ_CP064060.1 Anoxybacillus caldiproteolyticus
48 2898081 2898236 + NC_014364.1 Sediminispirochaeta smaragdinae DSM 11293
49 2871723 2871863 - NC_014364.1 Sediminispirochaeta smaragdinae DSM 11293
50 3720112 3720258 - NC_014364.1 Sediminispirochaeta smaragdinae DSM 11293
51 467948 468094 + NZ_CP023434.1 Suicoccus acidiformans
52 1010630 1010776 + NZ_CP031700.1 Neisseria zalophi
53 685863 686003 + NC_007530.2 Bacillus anthracis str. 'Ames Ancestor'
54 1290763 1290924 - NC_011295.1 Coprothermobacter proteolyticus DSM 5265
55 906330 906470 - NZ_CP034998.1 Rhizobium acidisoli
56 3588357 3588497 - NZ_CP034998.1 Rhizobium acidisoli
57 4049527 4049661 - NZ_CP034998.1 Rhizobium acidisoli
58 635558 635698 + NZ_CP024109.1 Bacillus cytotoxicus
59 3285152 3285286 + NZ_CP007044.2 Chania multitudinisentens RB-25
60 4934182 4934325 - NZ_CP007044.2 Chania multitudinisentens RB-25
61 5802212 5802376 - NZ_CP043998.1 Clostridium diolis
62 5054093 5054236 - NZ_CP043998.1 Clostridium diolis
63 4159642 4159776 - NZ_CP043998.1 Clostridium diolis
64 5077550 5077717 - NZ_CP043998.1 Clostridium diolis
65 3141580 3141714 - NC_014306.1 Erwinia billingiae Eb661
66 4452500 4452640 - NZ_CP040336.1 Bacillus luti
67 2184720 2184866 + NZ_CP040336.1 Bacillus luti
68 1289183 1289323 - NZ_CP032627.1 Lactococcus allomyrinae
69 3167883 3168017 + NZ_CP019706.1 Pantoea alhagi
70 5220895 5221029 - NZ_CP011254.1 Serratia fonticola
71 3843847 3843990 - NZ_CP011254.1 Serratia fonticola
72 144435 144575 + NC_014652.1 Caldicellulosiruptor hydrothermalis 108
73 155906 156049 + NC_014652.1 Caldicellulosiruptor hydrothermalis 108
74 713275 713421 + NC_014652.1 Caldicellulosiruptor hydrothermalis 108
75 181952 182086 - NC_014633.1 Ilyobacter polytropus DSM 2926
76 966146 966286 + NZ_LS483476.1 Lederbergia lentus
77 4246156 4246290 - NZ_LS483476.1 Lederbergia lentus
78 2138207 2138371 - NZ_CP013400.1 Burkholderia seminalis
79 2410261 2410416 - NZ_CP013400.1 Burkholderia seminalis
80 4043569 4043706 - NC_014829.1 Evansella cellulosilytica DSM 2522
81 517440 517574 + NC_014829.1 Evansella cellulosilytica DSM 2522
82 2109768 2109905 - NZ_CP014334.1 Fervidobacterium islandicum
83 196913 197062 - NZ_CP014334.1 Fervidobacterium islandicum
84 1913454 1913579 - NZ_CP019699.1 Novibacillus thermophilus
85 3438416 3438553 - NZ_CP019699.1 Novibacillus thermophilus
86 1998366 1998488 + NZ_CP019699.1 Novibacillus thermophilus
87 2211297 2211434 + NZ_CP019699.1 Novibacillus thermophilus
88 4554432 4554569 - NZ_CP053989.1 Niallia circulans
89 3577879 3578043 + NZ_CP017561.1 Paraburkholderia sprentiae WSM5005
90 2925925 2926086 - NZ_CP016537.2 Planococcus halocryophilus
91 554846 554980 + NZ_CP016537.2 Planococcus halocryophilus
92 2069398 2069532 + NC_015567.1 Serratia plymuthica AS9
93 4258001 4258135 - NZ_CP050508.1 Raoultella terrigena
94 2696610 2696744 - NZ_CP061511.1 Mixta calida
95 2067966 2068100 + NZ_CP048784.1 Serratia liquefaciens
96 3412913 3413077 + NZ_CP066075.1 Paraburkholderia ginsengisoli
97 2122840 2122974 + NZ_LR134494.1 Serratia quinivorans
98 2814909 2815070 - NZ_CP016543.2 Planococcus donghaensis
99 2731953 2732099 - NZ_CP048649.1 Aminipila butyrica
100 3993583 3993738 - NC_022571.1 Clostridium saccharobutylicum DSM 13864
101 1779352 1779489 + NC_022571.1 Clostridium saccharobutylicum DSM 13864
102 2830002 2830136 - NZ_CP026377.1 Mixta gaviniae
103 2052532 2052654 - NC_014657.1 Caldicellulosiruptor owensensis OL
104 69983 70123 + NC_014657.1 Caldicellulosiruptor owensensis OL
105 78147 78290 + NC_014657.1 Caldicellulosiruptor owensensis OL
106 1009999 1010139 - NZ_LT990039.1 Massilistercora timonensis
107 673399 673539 + NZ_CP032365.1 Bacillus wiedmannii
108 502720 502860 + NZ_LR594050.1 Streptococcus porcinus
109 3534562 3534702 - NZ_CP014167.1 Paenibacillus yonginensis
110 3263941 3264084 - NC_006510.1 Geobacillus kaustophilus HTA426
111 1925381 1925536 - NC_006510.1 Geobacillus kaustophilus HTA426
112 2718547 2718708 - NZ_CP016539.2 Planococcus plakortidis
113 2602104 2602265 - NZ_CP013659.2 Planococcus rifietoensis
114 259206 259340 + NZ_CP013659.2 Planococcus rifietoensis
115 3277010 3277171 + NZ_CP013862.1 Lentibacillus amyloliquefaciens
116 2589617 2589757 + NZ_CP020028.1 Paenibacillus kribbensis
117 752705 752845 - NZ_LR134341.1 Streptococcus pseudoporcinus
118 2650973 2651113 - NC_009437.1 Caldicellulosiruptor saccharolyticus DSM 8903
119 246601 246723 + NC_009437.1 Caldicellulosiruptor saccharolyticus DSM 8903
120 1200689 1200829 + NZ_LR134293.1 Streptococcus canis
121 6252703 6252840 - NZ_CP022464.2 Enterocloster bolteae
122 5929635 5929781 - NZ_CP022464.2 Enterocloster bolteae
123 1433693 1433830 + NZ_CP022464.2 Enterocloster bolteae
124 4617222 4617359 - NZ_CP022464.2 Enterocloster bolteae
125 4368826 4368963 - NZ_CP022464.2 Enterocloster bolteae
126 3897741 3897875 - NZ_CP065838.1 Klebsiella quasipneumoniae
127 4156454 4156588 - NZ_CP054254.1 Klebsiella variicola
128 1369955 1370089 + NC_016845.1 Klebsiella pneumoniae subsp. pneumoniae HS11286
129 2204272 2204433 - NZ_CP045927.1 Staphylococcus agnetis
130 118363 118503 + NC_014392.1 Caldicellulosiruptor obsidiansis OB47
131 129827 129970 + NC_014392.1 Caldicellulosiruptor obsidiansis OB47
132 444532 444687 + NZ_CP012502.1 Bacillus beveridgei
133 207574 207726 + NZ_CP012502.1 Bacillus beveridgei
134 2468153 2468287 - NZ_CP032364.1 Lachnoanaerobaculum umeaense
135 409626 409775 + NZ_CP032364.1 Lachnoanaerobaculum umeaense
136 2620309 2620443 - NZ_CP043727.1 Yersinia canariae
137 2391123 2391266 + NZ_CP012395.1 Clostridium autoethanogenum DSM 10061
138 128779 128922 + NC_014328.1 Clostridium ljungdahlii DSM 13528
139 3657138 3657281 - NZ_CP017703.1 Aeribacillus pallidus
140 1457243 1457386 + NZ_CP017703.1 Aeribacillus pallidus
141 1669339 1669482 + NZ_CP017703.1 Aeribacillus pallidus
142 1240634 1240789 + NZ_CP013114.1 Staphylococcus equorum
143 291349 291510 + NZ_CP008747.1 Staphylococcus hyicus
144 5091483 5091626 - NC_020291.1 Clostridium saccharoperbutylacetonicum N1-4(HMT)
145 1112585 1112728 + NZ_CP028926.1 Pasteurella multocida
146 324441 324581 + NZ_CP028926.1 Pasteurella multocida
147 2943252 2943374 - NZ_CP013652.1 Paenibacillus naphthalenovorans
148 3290009 3290167 - NZ_CP013652.1 Paenibacillus naphthalenovorans
149 2629713 2629853 + NZ_CP017704.1 Peribacillus simplex NBRC 15720 = DSM 1321
150 5205272 5205412 - NZ_CP045298.1 Paenibacillus brasilensis
151 2646325 2646474 + NZ_CP054205.1 Pseudomonas rhodesiae
152 2339176 2339310 - NZ_CP040924.1 Clostridium thermarum
153 374980 375123 - NZ_CP016622.1 Parageobacillus thermoglucosidasius
154 566613 566759 + NZ_CP017237.1 Moorella thermoacetica
155 1166889 1167023 + NC_007645.1 Hahella chejuensis KCTC 2396
156 2528308 2528457 + NC_007645.1 Hahella chejuensis KCTC 2396
157 741213 741353 + NZ_CP027286.1 Clostridium chauvoei
158 1400918 1401061 + NZ_CP027286.1 Clostridium chauvoei
159 460429 460578 + NZ_CP047361.1 Macrococcus canis
160 402119 402253 + NZ_CP009787.1 Yersinia rohdei
161 2425897 2426037 - NZ_CP031124.1 Ephemeroptericola cinctiostellae
162 302052 302180 + NC_015500.1 Treponema brennaborense DSM 12168
163 1462059 1462184 + NC_015500.1 Treponema brennaborense DSM 12168
164 663897 664034 - NC_015500.1 Treponema brennaborense DSM 12168
165 1659125 1659268 + NZ_LR134373.1 Yersinia pseudotuberculosis
166 689732 689872 + NC_011725.1 Bacillus cereus B4264
167 524186 524347 + NZ_CP022046.2 Mammaliicoccus sciuri
168 2523733 2523873 - NC_014721.1 Caldicellulosiruptor kristjanssonii I77R1B
169 684516 684656 + NZ_CP064875.1 Bacillus toyonensis
170 1419638 1419772 + NZ_CP012621.1 Zobellella denitrificans
171 3326520 3326678 - NZ_CP031415.1 Saccharospirillum mangrovi
172 2519290 2519439 + NZ_CP010896.1 Pseudomonas simiae
173 514396 514536 + NC_017583.1 Spirochaeta thermophila DSM 6578
174 376078 376194 + NC_017583.1 Spirochaeta thermophila DSM 6578
175 1583471 1583605 + NZ_CP045720.1 Pantoea eucalypti
176 1536224 1536358 + NZ_CP038853.1 Pantoea vagans
177 3925765 3925899 - NZ_CP041247.1 Raoultella electrica
178 3083012 3083146 + NZ_CP026047.1 Raoultella planticola
179 918646 918804 + NZ_CP039710.1 Thermoactinomyces vulgaris
180 495917 496051 + NZ_CP006880.1 Rhizobium gallicum bv. gallicum R602sp
181 1076355 1076495 - NZ_CP006880.1 Rhizobium gallicum bv. gallicum R602sp
182 4393481 4393615 - NZ_CP036175.1 Klebsiella huaxiensis
183 4146959 4147102 - NZ_CP036175.1 Klebsiella huaxiensis
184 2263598 2263732 - NZ_CP036150.1 Oceanispirochaeta crateris
185 3662859 3662999 + NZ_CP036150.1 Oceanispirochaeta crateris
186 1986347 1986484 - NZ_CP036150.1 Oceanispirochaeta crateris
187 176793 176939 - NZ_CP036150.1 Oceanispirochaeta crateris
188 2497764 2497898 - NZ_CP034148.1 Pantoea agglomerans
189 3199968 3200102 + NZ_CP014136.1 Gibbsiella quercinecans
190 2180462 2180602 - NZ_CP014136.1 Gibbsiella quercinecans
191 4142228 4142362 - NZ_CP046672.1 Raoultella ornithinolytica
192 2421902 2422036 - NZ_LN907827.1 Erwinia gerundensis
193 3712968 3713117 + NZ_LN907827.1 Erwinia gerundensis
194 417363 417509 + NZ_CP015064.1 Mesorhizobium ciceri biovar biserrulae
195 2173292 2173444 + NZ_LR130778.1 Petrocella atlantisensis
196 2613498 2613632 + NZ_LR130778.1 Petrocella atlantisensis
197 1504804 1504947 + NZ_CP034413.2 Dysosmobacter welbionis
198 3766952 3767086 - NZ_CP054043.1 Yersinia mollaretii ATCC 43969
199 350656 350796 - NZ_CP023643.1 Brochothrix thermosphacta
200 2807042 2807203 - NZ_CP059540.1 Planococcus maritimus
201 566877 567011 + NZ_CP059540.1 Planococcus maritimus
202 2785614 2785775 - NZ_CP016538.2 Planococcus maritimus
203 570794 570928 + NZ_CP016538.2 Planococcus maritimus
204 1691512 1691652 - NC_022369.1 Lactococcus lactis subsp. cremoris KW2
205 2514546 2514692 - NZ_CP018845.1 Herbaspirillum robiniae
206 2501397 2501552 - NZ_CP018845.1 Herbaspirillum robiniae
207 189268 189408 + NZ_CP019728.1 Jeotgalibaca dankookensis
208 1163658 1163798 - NZ_CP019728.1 Jeotgalibaca dankookensis
209 2804363 2804512 + NZ_CP027756.1 Pseudomonas synxantha
210 2521151 2521291 + NZ_CP045769.1 Enterobacter cancerogenus
211 1020868 1021002 - NZ_CP049115.1 Pantoea stewartii
212 1763688 1763822 + NC_017554.1 Pantoea ananatis PA13
213 3010744 3010896 - NC_008148.1 Rubrobacter xylanophilus DSM 9941
214 985828 985983 + NC_008148.1 Rubrobacter xylanophilus DSM 9941
215 1915930 1916067 + NC_008148.1 Rubrobacter xylanophilus DSM 9941
216 3456648 3456791 - NZ_CP038662.1 Serratia nematodiphila
217 2116192 2116338 + NZ_LT906479.1 Serratia ficaria
218 3506180 3506323 - NZ_LT906479.1 Serratia ficaria
219 3013885 3014016 - NZ_CP071320.1 Serratia ureilytica
220 1617708 1617851 + NZ_CP071320.1 Serratia ureilytica
221 2761997 2762140 - NZ_CP016948.1 Serratia surfactantfaciens
222 778863 779003 - NZ_CP023671.1 Clostridium septicum
223 4569918 4570052 - NZ_CP060111.1 Klebsiella michiganensis
224 4301937 4302080 - NZ_CP060111.1 Klebsiella michiganensis
225 1291510 1291650 - NZ_AP019004.1 Phascolarctobacterium faecium
226 2165217 2165369 + NZ_CP068285.1 Ralstonia syzygii subsp. celebesensis
227 2918818 2918958 + NZ_LS999205.1 Pseudomonas protegens CHA0
228 899998 900132 + NZ_CP011366.1 Salinicoccus halodurans
229 954028 954171 + NC_013642.1 Thermotoga naphthophila RKU-10
230 606296 606436 - NC_013642.1 Thermotoga naphthophila RKU-10
231 1025998 1026138 - NZ_CP016605.1 Bisgaardia hudsonensis
232 2373884 2374021 - NZ_CP045293.1 Paenibacillus guangzhouensis
233 5898990 5899133 + NZ_CP045293.1 Paenibacillus guangzhouensis
234 28584 28733 - NC_014376.1 [Clostridium] saccharolyticum WM1
235 3280346 3280483 - NC_014376.1 [Clostridium] saccharolyticum WM1
236 1972809 1972964 - NZ_CP026113.1 Paraburkholderia terrae
237 2371696 2371851 + NZ_CP026113.1 Paraburkholderia terrae
238 1378939 1379091 - NZ_CP034328.1 Tabrizicola piscis
239 613415 613576 + NZ_LT906462.1 Mammaliicoccus stepanovicii
240 2030421 2030564 - NC_016633.1 Sphaerochaeta pleomorpha str. Grapes
241 2896713 2896853 + NC_016633.1 Sphaerochaeta pleomorpha str. Grapes
242 2543626 2543766 - NZ_CP029364.1 Bacillus halotolerans
243 3566272 3566412 - NZ_AP019007.1 Enterobacter oligotrophicus
244 1325046 1325195 + NZ_CP012676.1 Pseudomonas versuta
245 3361911 3362063 + NZ_CP012943.1 Ralstonia solanacearum
246 5099570 5099719 - NC_012560.1 Azotobacter vinelandii DJ
247 2881504 2881644 - NZ_CP020953.1 Clostridium drakei
248 5397132 5397269 - NZ_CP020953.1 Clostridium drakei
249 1315582 1315722 + NZ_CP009933.1 Clostridium scatologenes
250 4524249 4524386 + NZ_CP009933.1 Clostridium scatologenes
251 3494726 3494866 + NZ_CP051464.1 Bacillus mojavensis
252 2695453 2695602 + NZ_CP061079.1 Pseudomonas chlororaphis
253 3259283 3259432 - NC_017079.1 Caldilinea aerophila DSM 14535 = NBRC 104270
254 1931613 1931753 - NZ_CP011803.1 Clostridium carboxidivorans P7
255 4542939 4543076 - NZ_CP011803.1 Clostridium carboxidivorans P7
256 292865 292999 + NZ_CP040765.1 Paracoccus liaowanqingii
257 2483678 2483827 + NZ_CP023272.1 Pseudomonas lurida
258 2118156 2118299 - NC_008261.1 Clostridium perfringens ATCC 13124
259 2045272 2045412 + NZ_LT906448.1 Pasteurella dagmatis
260 1288473 1288613 + NZ_LT906448.1 Pasteurella dagmatis
261 1254417 1254557 + NZ_CP014204.2 Clostridium baratii
262 2395374 2395499 - NZ_CP014204.2 Clostridium baratii
263 3417001 3417141 - NZ_LR134340.1 Escherichia marmotae
264 1171054 1171194 - NZ_CP014262.1 Pseudomonas corrugata
265 3938900 3939049 - NZ_CP018420.1 Pseudomonas veronii
266 1404947 1405081 + NZ_CP034235.1 Paenibacillus psychroresistens
267 884800 884949 - NZ_CP005960.1 Pseudomonas mandelii JR-1
268 3144551 3144688 + NC_011831.1 Chloroflexus aggregans DSM 9485
269 2346108 2346248 - NC_010556.1 Exiguobacterium sibiricum 255-15
270 2018859 2018999 - NZ_CP043404.1 Bacillus safensis
271 1564102 1564236 + NC_010694.1 Erwinia tasmaniensis Et1/99
272 2509443 2509592 + NZ_CP027723.1 Pseudomonas orientalis
273 2132668 2132808 - NZ_CP065425.1 Heyndrickxia vini
274 4221727 4221861 + NZ_CP065425.1 Heyndrickxia vini
275 912317 912457 + NZ_CP024035.1 Priestia aryabhattai
276 3981526 3981666 - NZ_CP034725.1 Pseudomonas brassicacearum
277 2053260 2053415 - NZ_CP020330.1 Martelella mediterranea DSM 17316
278 519154 519276 - NZ_CP020330.1 Martelella mediterranea DSM 17316
279 2274838 2274969 - NZ_CP020330.1 Martelella mediterranea DSM 17316
280 1419169 1419309 - NZ_CP048810.1 Pseudomonas bijieensis
281 2666093 2666242 + NZ_CP035088.1 Pseudomonas viciae
282 1721480 1721620 - NZ_CP033744.1 Citrobacter freundii
283 136211 136345 + NZ_CP033433.1 Cohnella candidum
284 5040288 5040431 + NZ_CP033433.1 Cohnella candidum
285 2416685 2416846 - NZ_CP013911.1 Staphylococcus haemolyticus
286 1625583 1625723 + NZ_CP018804.1 Histophilus somni
287 1555150 1555299 + NZ_CP018804.1 Histophilus somni
288 1168936 1169073 + NC_015578.1 Treponema primitia ZAS-2
289 272497 272640 - NZ_CP034910.1 Ensifer alkalisoli
290 70572 70706 + NZ_CP034910.1 Ensifer alkalisoli
291 2475085 2475234 + NZ_CP027002.1 [Ruminococcus] gnavus ATCC 29149
292 2649860 2650009 + NZ_CP012400.2 Pseudomonas yamanorum
293 360496 360642 + NC_015152.1 Sphaerochaeta globosa str. Buddy
294 2722273 2722413 + NC_015152.1 Sphaerochaeta globosa str. Buddy
295 3752444 3752599 - NZ_CP014616.1 Sporosarcina psychrophila
296 1762644 1762778 + NZ_CP014616.1 Sporosarcina psychrophila
297 1040204 1040350 - NZ_CP059565.1 Neisseria wadsworthii
298 539423 539566 + NZ_CP018058.1 Geobacillus thermocatenulatus
299 2145532 2145675 - NZ_CP061472.1 Geobacillus thermoleovorans
300 1817335 1817472 + NC_009718.1 Fervidobacterium nodosum Rt17-B1
301 2446713 2446856 - NZ_CP061470.1 Geobacillus zalihae
302 4344925 4345065 + NZ_CP038469.1 Citrobacter tructae
303 1177083 1177238 + NZ_CP011930.1 Herbaspirillum seropedicae
304 1163457 1163612 + NZ_CP011930.1 Herbaspirillum seropedicae
305 322135 322275 + NZ_CP054614.1 Paenibacillus barcinonensis
306 2664657 2664806 - NZ_CP031423.1 Microbacterium lemovicicum
307 2077547 2077687 - NZ_CP017786.1 Bacillus xiamenensis
308 4885168 4885320 - NZ_CP063458.1 Humisphaera borealis
309 2555798 2555935 + NZ_CP034346.1 Paenibacillus lutimineralis
310 1622404 1622565 - NZ_CP068061.1 Mammaliicoccus vitulinus
311 62832 62972 + NZ_CP045296.1 Paenibacillus cellulositrophicus
312 307167 307322 + NC_003869.1 Caldanaerobacter subterraneus subsp. tengcongensis MB4
313 764144 764272 + NC_003869.1 Caldanaerobacter subterraneus subsp. tengcongensis MB4
314 3068115 3068267 - NZ_LR131272.1 Arthrobacter agilis
315 941198 941347 + NZ_CP053708.1 Lichenicola cladoniae
316 3497264 3497419 - NZ_CP053708.1 Lichenicola cladoniae
317 3009193 3009333 - NC_013716.1 Citrobacter rodentium ICC168
318 898415 898552 - NZ_CP038256.1 Microbacterium sediminis
319 335988 336143 + NZ_CP042304.1 Devosia ginsengisoli
320 736205 736339 - NZ_CP005973.1 Photobacterium gaetbulicola Gung47
321 1817501 1817644 - NC_008593.1 Clostridium novyi NT
322 4175279 4175416 - NZ_CP061081.1 Marinomonas arctica
323 1563825 1563962 + NZ_CP012024.1 Bacillus smithii
324 3256201 3256362 - NZ_CP012024.1 Bacillus smithii
325 4128197 4128349 - NZ_CP061527.1 Shigella dysenteriae
326 1085336 1085497 - NZ_CP020773.1 Staphylococcus lutrae
327 3713734 3713871 - NZ_CP054301.1 Marinomonas primoryensis
328 910576 910710 + NC_019897.1 Thermobacillus composti KWC4
329 4074438 4074584 + NZ_CP013106.1 Halomonas huangheensis
330 2230071 2230232 - NC_017934.1 Mesotoga prima MesG1.Ag.4.2
331 1128972 1129109 + NZ_AP018437.1 Pelolinea submarina
332 1141091 1141225 + NZ_AP018437.1 Pelolinea submarina
333 2433168 2433284 - NZ_AP018437.1 Pelolinea submarina
334 3140054 3140209 - NC_020059.1 Rhizobium tropici CIAT 899
335 163158 163298 - NZ_LT556085.1 Citrobacter amalonaticus
336 770843 770998 - NZ_CP018199.1 Staphylococcus succinus
337 1564939 1565079 + NZ_CP045205.1 Citrobacter telavivensis
338 674146 674298 + NC_011653.1 Thermosipho africanus TCF52B
339 2188997 2189146 + NZ_CP062158.2 Pseudomonas lundensis
340 2229680 2229835 + NZ_CP035758.1 Ktedonosporobacter rubrisoli
341 1233217 1233357 + NZ_CP049889.1 Jeotgalibaca porci
342 3937795 3937941 - NC_004578.1 Pseudomonas syringae pv. tomato str. DC3000
343 413507 413644 + NC_018704.1 Amphibacillus xylanus NBRC 15112
344 2033923 2034078 - NC_018704.1 Amphibacillus xylanus NBRC 15112
345 1976708 1976854 + NZ_CP007039.1 Pseudomonas cichorii JBC1
346 2483299 2483439 + NC_010001.1 Lachnoclostridium phytofermentans ISDg
347 1920389 1920526 - NZ_CP034909.1 Ensifer alkalisoli
348 3524634 3524771 - NC_015559.1 Marinomonas posidonica IVIA-Po-181
349 6093978 6094121 - NZ_CP009287.1 Paenibacillus graminis
350 4561646 4561783 - NZ_CP009287.1 Paenibacillus graminis
351 2769416 2769559 - NZ_CP034791.1 Caldicellulosiruptor changbaiensis
352 5780731 5780865 - NZ_CP007142.1 Gynuella sunshinyii YC6258
353 50807 50941 + NZ_CP045074.1 Paracoccus kondratievae
354 3279134 3279274 + NZ_CP011150.1 Bacillus altitudinis
355 1693934 1694071 - NZ_CP070273.1 Marinomonas foliarum
356 7072613 7072756 - NZ_CP009285.1 Paenibacillus borealis
357 5204311 5204448 - NZ_CP009285.1 Paenibacillus borealis
358 2374078 2374218 + NZ_CP009285.1 Paenibacillus borealis
359 4060266 4060403 - NZ_CP045201.1 Pseudopuniceibacterium antarcticum
360 402415 402558 - NZ_CP036170.1 [Clostridium] scindens ATCC 35704
361 2765200 2765340 + NZ_CP045798.1 Thermoanaerosceptrum fracticalcis
362 3239517 3239651 + NZ_CP013023.1 Paenibacillus bovis
363 689320 689454 + NZ_CP017940.1 Phyllobacterium zundukense
364 1661269 1661430 + NC_011661.1 Dictyoglomus turgidum DSM 6724
365 1274710 1274859 - NZ_CP065729.1 Macrococcus caseolyticus
366 407076 407216 - NZ_CP040863.1 Rodentibacter heylii
367 4045818 4045952 - NZ_CP006877.1 Rhizobium gallicum bv. gallicum R602sp
368 2885011 2885151 - NC_012691.1 Tolumonas auensis DSM 9187
369 1315583 1315720 + NZ_CP065915.1 Pelagovum pacificum
370 3179030 3179167 - NZ_CP035492.1 Paenibacillus protaetiae
371 1535014 1535151 + NC_015275.1 Cellulosilyticum lentocellum DSM 5427
372 3886547 3886693 - NZ_CP068034.2 Pseudomonas syringae
373 4364817 4364957 - NZ_CP009428.1 Paenibacillus odorifer
374 1516866 1517000 + NC_020560.1 Sinorhizobium meliloti 2011
375 1287048 1287179 - NZ_CP071454.1 Rhizobium lentis
376 1645683 1645817 + NZ_CP071454.1 Rhizobium lentis
377 651257 651394 - NC_012785.1 Kosmotoga olearia TBF 19.5.1
378 204671 204808 - NZ_CP018171.1 Mesorhizobium oceanicum
379 144986 145123 - NZ_CP015231.1 Epibacterium mobile F1926
380 682138 682293 + NZ_CP015231.1 Epibacterium mobile F1926
381 3533132 3533266 + NZ_CP021850.1 Pseudoclostridium thermosuccinogenes
382 1834866 1835003 - NZ_CP053435.1 Spirosoma taeanense
383 3791475 3791621 - NZ_CP042804.1 Pseudomonas amygdali pv. tabaci str. ATCC 11528
384 3900746 3900901 + NZ_CP022983.1 Cytobacillus kochii
385 646632 646778 + NZ_CP030776.1 Clostridium butyricum
386 1363991 1364140 - NZ_AP012334.1 Scardovia inopinata JCM 12537
387 2556746 2556886 - NC_023035.1 Salinispira pacifica
388 2323408 2323554 + NZ_CP067022.1 Pseudomonas cannabina pv. alisalensis
389 2677119 2677265 + NC_017672.3 Paenibacillus mucilaginosus K02
390 2251978 2252115 - NC_015732.1 Treponema caldarium DSM 7334
391 2060335 2060475 + NC_015732.1 Treponema caldarium DSM 7334
392 899992 900126 + NC_015732.1 Treponema caldarium DSM 7334
393 2423937 2424077 + NC_015732.1 Treponema caldarium DSM 7334
394 879940 880080 + NZ_CP015882.1 Ensifer adhaerens
395 3870990 3871130 + NZ_CP023665.1 Bacillus paralicheniformis
396 1467846 1467986 - NZ_CP015029.1 Frederiksenia canicola
397 38873 39013 - NZ_CP013110.1 Sinorhizobium americanum
398 629884 630018 - NZ_CP013110.1 Sinorhizobium americanum
399 1685508 1685642 - NZ_CP013110.1 Sinorhizobium americanum
400 452268 452402 - NZ_CP061004.1 Agrobacterium tumefaciens
401 1652846 1653001 + NZ_CP061004.1 Agrobacterium tumefaciens
402 1555293 1555433 + NZ_CP016843.1 Carnobacterium divergens
403 65960 66115 - NZ_CP015090.1 Salipiger abyssi
404 2372678 2372836 - NC_014410.1 Thermoanaerobacterium thermosaccharolyticum DSM 571
405 2383612 2383755 - NC_014410.1 Thermoanaerobacterium thermosaccharolyticum DSM 571
406 3672163 3672303 + NC_006270.3 Bacillus licheniformis DSM 13 = ATCC 14580
407 69654 69788 + NZ_CP054027.1 Rhizobium hidalgonense
408 4348766 4348900 + NZ_CP071604.1 Rhizobium binae
409 4359674 4359808 + NZ_CP013532.1 Rhizobium phaseoli
410 1119030 1119170 + NZ_CP016180.1 Pasteurella skyensis
411 1023797 1023937 - NZ_LS483443.1 Aggregatibacter segnis ATCC 33393
412 2083417 2083557 + NZ_LR134327.1 Aggregatibacter aphrophilus ATCC 33389
413 4201108 4201242 + NZ_CP071612.1 Rhizobium bangladeshense
414 584347 584496 + NC_016584.1 Desulfosporosinus orientis DSM 765
415 276244 276384 + NC_021883.1 Mannheimia haemolytica USMARC_2286
416 115388 115537 - NC_021883.1 Mannheimia haemolytica USMARC_2286
417 4936023 4936157 - NZ_CP071678.1 Rhizobium ruizarguesonis
418 3972944 3973087 - NZ_CP012871.1 [Enterobacter] lignolyticus
419 4077500 4077634 - NZ_CP018866.1 Sutcliffiella cohnii
420 4111588 4111734 - NZ_CP018866.1 Sutcliffiella cohnii
421 1035779 1035919 - NZ_CP016604.1 Otariodibacter oris
422 1710776 1710916 + NZ_CP030753.1 Actinobacillus pleuropneumoniae
423 1963774 1963914 + NZ_CP009159.1 Actinobacillus suis ATCC 33415
424 220903 221037 + NZ_CP017943.1 Phyllobacterium zundukense
425 2136443 2136583 - NZ_CP007715.1 Actinobacillus equuli subsp. equuli
426 5876250 5876390 + NZ_CP016809.1 Paenibacillus ihbetae
427 1051782 1051916 + NZ_CP015881.1 Ensifer adhaerens
428 1505373 1505492 + NZ_CP015881.1 Ensifer adhaerens
429 1359691 1359846 - NZ_CP030239.1 Paracoccus mutanolyticus
430 222259 222399 + NZ_CP006944.1 Mannheimia varigena USDA-ARS-USMARC-1312
431 578428 578568 + NZ_CP061280.1 Mannheimia bovis
432 4304399 4304533 + NZ_CP013500.1 Rhizobium esperanzae
433 1191257 1191409 - NC_015436.1 Sphaerochaeta coccoides DSM 17374
434 1950966 1951112 - NC_015436.1 Sphaerochaeta coccoides DSM 17374
435 6503507 6503644 - NZ_CP048429.1 Paenibacillus jilunlii
436 726655 726789 - NZ_HG938354.1 Neorhizobium galegae bv. orientalis str. HAMBI 540
437 1097040 1097180 + NZ_LT906463.1 Haemophilus pittmaniae
438 2520230 2520382 - NC_019978.1 Halobacteroides halobius DSM 5150
439 213578 213718 - NZ_CP015031.1 Basfia succiniciproducens
440 596204 596344 - NC_006300.1 [Mannheimia] succiniciproducens MBEL55E
441 2245232 2245369 + NC_015730.1 Roseobacter litoralis Och 149
442 4750245 4750379 - NZ_CP034437.1 Paenibacillus albus
443 943280 943435 - NZ_CP024422.1 Paracoccus yeei
444 296891 297025 + NZ_CP015378.1 Fictibacillus phosphorivorans
445 2000670 2000813 - NZ_LT906477.1 Clostridium cochlearium
446 1731681 1731833 - NZ_AP022567.1 Mycolicibacterium mageritense
447 731633 731773 + NZ_LR134167.1 Avibacterium volantium
448 1506299 1506454 + NZ_CP048635.1 Rhizobium oryzihabitans
449 298759 298893 - NZ_CP024423.1 Paracoccus yeei
450 315498 315650 - NZ_CP024423.1 Paracoccus yeei
451 39802 39936 - NC_011887.1 Methylobacterium nodulans ORS 2060
452 1753114 1753275 - NC_020453.1 Bradyrhizobium oligotrophicum S58
453 1583444 1583581 - NZ_CP011232.1 Kosmotoga pacifica
454 357685 357825 + NC_014209.1 Thermoanaerobacter mathranii subsp. mathranii str. A3
455 282000 282140 + NC_013921.1 Thermoanaerobacter italicus Ab9
456 110762 110926 + NZ_CP066065.1 Schaalia meyeri
457 1070267 1070419 + NC_014221.1 Truepera radiovictrix DSM 17093
458 1189725 1189868 + NC_017243.1 Brachyspira intermedia PWS/A
459 1437721 1437876 + NZ_CP014342.1 Geobacillus subterraneus
460 1004991 1005146 + NZ_CP046910.1 Paraburkholderia acidiphila
461 880356 880490 - NZ_CP045073.1 Paracoccus kondratievae
462 4597140 4597262 - NC_022524.1 Bacillus infantis NRRL B-14911
463 3775957 3776082 - NZ_CP044117.1 Roseomonas mucosa
464 1557627 1557767 - NZ_CP013213.1 Erysipelothrix larvae
465 1072503 1072637 - NZ_CP059897.1 Ciceribacter thiooxidans
466 1005466 1005612 - NZ_LR134313.1 Neisseria canis
467 841388 841525 - NC_002678.2 Mesorhizobium japonicum MAFF 303099
468 3812270 3812404 + NZ_CP041217.1 Saccharibacillus brassicae
469 2318154 2318291 + NZ_CP027793.1 Rhodococcus hoagii
470 419817 419963 - NZ_CP028102.1 Fusobacterium mortiferum ATCC 9817
471 2314329 2314484 - NZ_CP031466.1 Paraburkholderia caffeinilytica
472 247845 247985 + NZ_CP059896.1 Ciceribacter thiooxidans
473 4619353 4619496 - NZ_CP007230.1 Yersinia similis
474 80794 80919 + NZ_CP024936.1 Paraburkholderia graminis
475 1209204 1209341 - NZ_CP012023.1 Celeribacter marinus
476 705508 705648 + NC_015519.1 Tepidanaerobacter acetatoxydans Re1
477 2677598 2677744 - NZ_CP019698.1 Desulfotomaculum ferrireducens
478 5476648 5476785 - NZ_CP015318.1 Mesorhizobium amorphae CCNWGS0123
479 1519071 1519226 + NZ_CP053857.1 Rhizobium pusense
480 197603 197740 - NZ_CP040761.1 Paracoccus liaowanqingii
481 4141943 4142083 + NZ_CP016616.1 Microvirga ossetica
482 755274 755411 - NC_015703.1 Runella slithyformis DSM 19594
483 346128 346265 - NZ_CP061502.1 Roseicitreum antarcticum
484 2507486 2507638 + NZ_CP036401.1 Massilia albidiflava
485 323846 323986 + NZ_CP020772.1 Halobacillus mangrovi
486 4130354 4130488 + NZ_CP020906.1 Rhizobium etli
487 9314734 9314853 - NC_019673.1 Saccharothrix espanaensis DSM 44229
488 990142 990306 + NZ_LR134406.1 Arachnia propionica
489 1089426 1089560 + NC_018068.1 Desulfosporosinus acidiphilus SJ4
490 7050277 7050414 - NZ_CP050063.1 Spirosoma aureum
491 588232 588387 + NZ_CP045072.1 Paracoccus kondratievae
492 774022 774165 - NC_011978.1 Thermotoga neapolitana DSM 4359
493 986961 987101 + NC_023151.1 Thermotoga maritima MSB8
494 961977 962120 - NZ_LS483422.1 Providencia heimbachae
495 467271 467423 - NZ_LN824141.1 Defluviitoga tunisiensis
496 663457 663603 - NZ_CP047180.1 Rathayibacter festucae
497 907607 907762 + NZ_CP015960.1 Paraburkholderia caribensis
498 408062 408208 + NZ_CP016020.1 Bacillus weihaiensis
499 3454925 3455068 - NC_008709.1 Psychromonas ingrahamii 37
500 604701 604835 + NZ_CP016534.2 Planococcus antarcticus DSM 14505
501 2626314 2626466 + NZ_CP016353.1 Prauserella marina
502 1998144 1998278 - NZ_CP029452.1 Sinorhizobium fredii CCBAU 25509
503 1505599 1505739 - NZ_CP012152.1 Anoxybacillus gonensis
504 811163 811282 + NZ_LT635772.1 Anaerococcus mediterraneensis
505 2057787 2057951 - NC_019695.1 Chroococcidiopsis thermalis PCC 7203
506 2140060 2140215 - NZ_CP012661.1 Defluviimonas alba
507 4297139 4297291 + NZ_CP019038.1 Massilia putida
508 3752831 3752968 - NC_017059.1 Pararhodospirillum photometricum DSM 122
509 2523612 2523752 - NC_015520.1 Mahella australiensis 50-1 BON
510 2044163 2044315 - NZ_CP040017.1 Massilia umbonata
511 2309706 2309846 + NZ_CP018622.1 Virgibacillus dokdonensis
512 2939621 2939740 + NZ_CP016793.1 Lentzea guizhouensis
513 1922627 1922776 - NC_014960.1 Anaerolinea thermophila UNI-1
514 1223042 1223194 + NZ_CP041185.1 Janthinobacterium tructae
515 63055 63210 - NC_010625.1 Paraburkholderia phymatum STM815
516 3658431 3658583 + NZ_CP023422.1 Janthinobacterium svalbardensis
517 3705195 3705347 + NZ_CP048832.1 Janthinobacterium lividum
518 310241 310384 - NZ_CP031123.2 Providencia huaxiensis
519 4039400 4039537 - NZ_CP015756.1 Clostridium estertheticum subsp. estertheticum
520 4204017 4204160 + NZ_CP029736.1 Providencia rettgeri
521 390782 390925 + NZ_CP015438.1 Anoxybacillus amylolyticus
522 1329222 1329359 + NZ_CP020612.1 Paracoccus contaminans
523 2487245 2487388 - NZ_CP024645.1 Rhizobacter gummiphilus
524 3646246 3646380 - NZ_CP031223.1 Psychrobacillus glaciei
525 618983 619123 - NC_020062.1 Rhizobium tropici CIAT 899
526 3964295 3964459 + NZ_CP047242.1 Trichormus variabilis 0441
527 137257 137400 + NZ_CP023536.1 Providencia alcalifaciens
528 2338631 2338786 - NZ_CP013416.1 Burkholderia ubonensis
529 2613428 2613583 - NZ_CP020738.1 Paraburkholderia acidophila
530 215134 215289 + NC_010676.1 Paraburkholderia phytofirmans PsJN
531 4261662 4261826 + NZ_AP014638.1 Leptolyngbya boryana IAM M-101
532 407165 407311 + NZ_LT635455.1 Olsenella timonensis
533 4400896 4401039 - NZ_CP040428.1 Jejubacter calystegiae
534 3258432 3258572 + NZ_CP045572.1 Nonomuraea nitratireducens
535 70675 70830 - NC_013895.2 Mageeibacillus indolicus UPII9-5
536 1889384 1889533 - NZ_LT635479.1 Lachnoclostridium phocaeense
537 4902583 4902717 + NZ_CP029480.1 Arcticibacterium luteifluviistationis
538 3874442 3874576 - NC_013037.1 Dyadobacter fermentans DSM 18053
539 1597453 1597608 + NC_019973.1 Mesorhizobium australicum WSM2073
540 1548886 1549041 + NZ_CP033507.1 Mesorhizobium jarvisii
541 2974054 2974212 - NC_013205.1 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
542 7137854 7137991 + NZ_CP025096.1 Spirosoma pollinicola
543 547723 547875 + NZ_CP032518.1 Cupriavidus oxalaticus
544 487457 487597 - NZ_CP071376.1 Clostridium gasigenes
545 3334551 3334706 - NZ_CP036532.1 Roseitalea porphyridii
546 2313890 2314045 - NZ_CP013461.1 Burkholderia stagnalis
547 187152 187316 + NC_019729.1 Oscillatoria nigro-viridis PCC 7112
548 4956740 4956904 + NZ_CP031941.1 Nostoc sphaeroides
549 8563343 8563495 + NZ_CP015163.1 Amycolatopsis albispora
550 288289 288453 + NZ_CP054698.1 Nostoc edaphicum CCNP1411
551 6585612 6585776 - NC_010628.1 Nostoc punctiforme PCC 73102
552 8141177 8141341 - NZ_CP024785.1 Nostoc flagelliforme CCNUN1
553 1468171 1468305 - NZ_CP021395.1 Bordetella hinzii
554 4324334 4324468 - NZ_CP016440.1 Bordetella pseudohinzii
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_CP009831.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF02653.18 0.99 415 13.5 same-strand Branched-chain amino acid transport system / permease component
2 PF13407.8 1.0 417 1479 same-strand Periplasmic binding protein domain
3 PF13377.8 0.64 266 1536.0 same-strand Periplasmic binding protein-like domain
++ More..