Protein Information |
Information Type | Description |
---|---|
Protein name | EXP04053 |
NCBI Accession ID | |
Organism | |
Left | |
Right | |
Strand | |
Nucleotide Sequence | ATGAAGACATCTAACAAAAACAACGAGAATTTAATTGCAAAATTGCAATATCAGTTACAACGCTACAAAGCAATGGGTAATGGTGCTATCTGCCAAGCTCTCAATAATAAAATTCACAGACTTTCCATTCAGCAAAAAGCGTGA |
Sequence | MKTSNKNNENLIAKLQYQLQRYKAMGNGAICQALNNKIHRLSIQQKA |
Source of smORF | Metagenomic Ribo-seq |
Function | |
Pubmed ID | 32601270 |
Domain | |
Functional Category | Function not yet assigned |
Uniprot ID | |
ORF Length (Amino Acid) | 47 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 1966237 | 1966377 | - | NC_014933.1 | Bacteroides helcogenes P 36-108 |
2 | 289258 | 289398 | - | NZ_CP027234.1 | Bacteroides heparinolyticus |
3 | 2920619 | 2920735 | - | NZ_CP027231.1 | Bacteroides zoogleoformans |
4 | 3115222 | 3115359 | - | NZ_CP040530.1 | Bacteroides thetaiotaomicron |
5 | 6060976 | 6061113 | - | NZ_CP012938.1 | Bacteroides ovatus |
6 | 873060 | 873197 | - | NZ_CP015401.2 | Bacteroides caecimuris |
7 | 1340454 | 1340588 | + | NZ_LN877293.1 | Bacteroides fragilis |
8 | 299315 | 299449 | + | NC_009614.1 | Phocaeicola vulgatus ATCC 8482 |
9 | 350563 | 350697 | + | NZ_LR699004.1 | Phocaeicola dorei |
10 | 3236549 | 3236677 | + | NZ_CP069440.1 | Phocaeicola coprophilus |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF00817.22 | 0.6 | 6 | 3661.5 | opposite-strand | impB/mucB/samB family |
2 | PF11799.10 | 0.6 | 6 | 3661.5 | opposite-strand | impB/mucB/samB family C-terminal domain |
3 | PF11798.10 | 0.6 | 6 | 3661.5 | opposite-strand | IMS family HHH motif |
4 | PF01841.21 | 0.7 | 7 | 1944 | opposite-strand | Transglutaminase-like superfamily |