* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP059674.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00005.29
|
0.67
|
2
|
838
|
same-strand
|
ABC transporter
|
2
|
PF00829.23
|
0.67
|
2
|
381.5
|
same-strand
|
Ribosomal prokaryotic L21 protein
|
3
|
PF04327.14
|
0.67
|
2
|
56.0
|
same-strand
|
Cysteine protease Prp
|
4
|
PF01261.26
|
0.67
|
2
|
193.0
|
same-strand
|
Xylose isomerase-like TIM barrel
|
++ More..