* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LR027880.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF08543.14
|
1.0
|
2
|
172.0
|
same-strand
|
Phosphomethylpyrimidine kinase
|
2
|
PF02133.17
|
1.0
|
2
|
969.0
|
same-strand
|
Permease for cytosine/purines, uracil, thiamine, allantoin
|
3
|
PF09512.12
|
1.0
|
2
|
2196.5
|
same-strand
|
Thiamine-precursor transporter protein (ThiW)
|
4
|
PF12822.9
|
1.0
|
2
|
2196.5
|
same-strand
|
ECF transporter, substrate-specific component
|
5
|
PF07155.14
|
1.0
|
2
|
2196.5
|
same-strand
|
ECF-type riboflavin transporter, S component
|
++ More..