ProsmORF-pred
Result : C0H3X9
Protein Information
Information Type Description
Protein name Uncharacterized HTH-type transcriptional regulator YgzD
NCBI Accession ID AL009126.3
Organism Bacillus subtilis (strain 168)
Left 966671
Right 966871
Strand -
Nucleotide Sequence ATGAAAAATAAAGTAAAAGAGCTGAGGGCACGCTTCGGCTATTCTCAGGAAAAACTCGGAGAAACGGTCGGCGTCACAAGACAGACTGTGGCAGCGATTGAAAAAGGCGATTATGTTCCCTCACTGCTGTTAGCACTGAAAATCTGCAAAGCCTTCTCCATGAAAATGGAGGATGTCTTTTGGTTAGAGGAGGAAAACTAA
Sequence MKNKVKELRARFGYSQEKLGETVGVTRQTVAAIEKGDYVPSLLLALKICKAFSMKMEDVFWLEEEN
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl22854. Profile Description: N/A. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.
Pubmed ID 9384377
Domain CDD:419869
Functional Category DNA-binding
Uniprot ID C0H3X9
ORF Length (Amino Acid) 66
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Conservation Analysis
Conservation Analysis
No. of Species: 240
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 966671 966871 - NC_000964.3 Bacillus subtilis subsp. subtilis str. 168
2 935998 936198 - NZ_CP034943.1 Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499
3 1142641 1142841 - NZ_CP033052.1 Bacillus vallismortis
4 945360 945560 - NZ_CP013984.1 Bacillus inaquosorum
5 1030335 1030535 + NZ_CP029364.1 Bacillus halotolerans
6 965818 966018 - NZ_CP051464.1 Bacillus mojavensis
7 899411 899611 - NZ_CP048852.1 Bacillus tequilensis
8 1764637 1764834 + NZ_CP048852.1 Bacillus tequilensis
9 896053 896256 - NZ_CP053376.1 Bacillus amyloliquefaciens
10 3048346 3048549 + NZ_CP011937.1 Bacillus velezensis
11 1005708 1005911 - NZ_LT603683.1 Bacillus glycinifermentans
12 948658 948864 - NC_006270.3 Bacillus licheniformis DSM 13 = ATCC 14580
13 1037664 1037870 - NZ_CP023665.1 Bacillus paralicheniformis
14 274973 275179 + NZ_CP018622.1 Virgibacillus dokdonensis
15 704360 704560 + NZ_CP064875.1 Bacillus toyonensis
16 716873 717073 + NZ_CP064875.1 Bacillus toyonensis
17 1218073 1218288 + NZ_CP064875.1 Bacillus toyonensis
18 4910331 4910522 - NZ_CP064875.1 Bacillus toyonensis
19 704748 704948 + NC_007530.2 Bacillus anthracis str. 'Ames Ancestor'
20 1228320 1228529 + NC_007530.2 Bacillus anthracis str. 'Ames Ancestor'
21 715849 716049 + NC_007530.2 Bacillus anthracis str. 'Ames Ancestor'
22 4428655 4428870 + NC_007530.2 Bacillus anthracis str. 'Ames Ancestor'
23 2985362 2985559 - NC_007530.2 Bacillus anthracis str. 'Ames Ancestor'
24 4433596 4433796 - NZ_CP040336.1 Bacillus luti
25 3855524 3855733 - NZ_CP040336.1 Bacillus luti
26 4417093 4417293 - NZ_CP040336.1 Bacillus luti
27 693206 693406 + NZ_CP032365.1 Bacillus wiedmannii
28 3071194 3071406 - NZ_CP032365.1 Bacillus wiedmannii
29 1245721 1245936 + NZ_CP032365.1 Bacillus wiedmannii
30 4624598 4624798 + NZ_CP032365.1 Bacillus wiedmannii
31 649217 649435 + NZ_CP024109.1 Bacillus cytotoxicus
32 709209 709427 + NC_011725.1 Bacillus cereus B4264
33 1279742 1279951 + NC_011725.1 Bacillus cereus B4264
34 723180 723383 + NC_011725.1 Bacillus cereus B4264
35 2697913 2698125 - NC_022524.1 Bacillus infantis NRRL B-14911
36 2632424 2632603 - NC_022524.1 Bacillus infantis NRRL B-14911
37 2577575 2577781 - NC_022524.1 Bacillus infantis NRRL B-14911
38 2054925 2055140 + NC_022524.1 Bacillus infantis NRRL B-14911
39 3290949 3291167 + NZ_LS483476.1 Lederbergia lentus
40 1375629 1375826 + NZ_CP016020.1 Bacillus weihaiensis
41 2067875 2068081 + NZ_CP016020.1 Bacillus weihaiensis
42 830535 830753 - NZ_CP024035.1 Priestia aryabhattai
43 1261871 1262077 + NC_021184.1 Desulfoscipio gibsoniae DSM 7213
44 2956339 2956509 - NZ_AP021853.1 Sporolactobacillus terrae
45 3939882 3940115 + NZ_CP013652.1 Paenibacillus naphthalenovorans
46 1195956 1196165 + NZ_CP038015.1 Paenisporosarcina antarctica
47 409237 409452 - NZ_CP013661.2 Planococcus kocurii
48 1373908 1374123 + NZ_CP019401.1 Planococcus faecalis
49 1282829 1283044 + NZ_CP016543.2 Planococcus donghaensis
50 1175853 1176056 + NZ_CP016543.2 Planococcus donghaensis
51 1336546 1336761 + NZ_CP016537.2 Planococcus halocryophilus
52 1306633 1306848 + NZ_CP016540.2 Planococcus versutus
53 1340568 1340744 + NZ_CP059540.1 Planococcus maritimus
54 1329110 1329295 + NZ_CP016538.2 Planococcus maritimus
55 3025330 3025497 + NZ_CP016538.2 Planococcus maritimus
56 1082819 1083004 + NZ_CP013659.2 Planococcus rifietoensis
57 2846392 2846574 + NZ_CP013659.2 Planococcus rifietoensis
58 608269 608478 + NZ_CP013862.1 Lentibacillus amyloliquefaciens
59 1146535 1146741 + NZ_CP009709.1 Weizmannia coagulans DSM 1 = ATCC 7050
60 3814036 3814239 - NZ_CP022315.1 Virgibacillus phasianinus
61 1365452 1365637 + NZ_CP016539.2 Planococcus plakortidis
62 1447599 1447799 + NZ_CP016534.2 Planococcus antarcticus DSM 14505
63 1319567 1319770 - NZ_CP016534.2 Planococcus antarcticus DSM 14505
64 2734324 2734530 - NZ_CP031223.1 Psychrobacillus glaciei
65 2120202 2120366 - NZ_CP031223.1 Psychrobacillus glaciei
66 3253314 3253523 - NZ_CP031223.1 Psychrobacillus glaciei
67 1650117 1650281 - NZ_CP014616.1 Sporosarcina psychrophila
68 4256673 4256870 + NC_014829.1 Evansella cellulosilytica DSM 2522
69 987385 987594 - NC_014829.1 Evansella cellulosilytica DSM 2522
70 4288916 4289119 - NC_014829.1 Evansella cellulosilytica DSM 2522
71 747195 747359 + NZ_CP015108.1 Sporosarcina ureae
72 1060021 1060215 + NC_013156.1 Methanocaldococcus fervens AG86
73 595045 595266 + NC_000868.1 Pyrococcus abyssi GE5
74 1726807 1727010 - NZ_CP014022.1 Staphylococcus lugdunensis
75 1140248 1140484 - NC_016751.1 Marinitoga piezophila KA3
76 1736703 1736921 - NC_011832.1 Methanosphaerula palustris E1-9c
77 1520593 1520802 + NC_011832.1 Methanosphaerula palustris E1-9c
78 3719316 3719522 - NZ_CP006837.1 Lysinibacillus varians
79 1010086 1010292 + NZ_CP019980.1 Lysinibacillus sphaericus
80 891969 892181 - NZ_CP014855.1 Thermococcus gorgonarius
81 33092 33304 + NZ_CP015102.1 Thermococcus pacificus
82 508973 509164 + NZ_CP009416.1 Jeotgalibacillus malaysiensis
83 315751 315951 - NZ_CP009416.1 Jeotgalibacillus malaysiensis
84 1355219 1355425 - NZ_CP018866.1 Sutcliffiella cohnii
85 1243661 1243858 - NC_012883.1 Thermococcus sibiricus MM 739
86 1437084 1437278 - NZ_CP013237.1 Streptococcus mutans
87 2036924 2037133 - NZ_CP040846.1 Thermococcus indicus
88 1280398 1280607 + NZ_CP015101.1 Thermococcus barossii
89 1413418 1413615 + NZ_CP014862.1 Thermococcus profundus
90 3520461 3520655 - NZ_CP041666.1 Radiobacillus deserti
91 2169886 2170107 + NC_019943.1 Methanoregula formicica SMSP
92 1069184 1069381 - NC_012804.1 Thermococcus gammatolerans EJ3
93 1710494 1710706 + NC_022084.1 Thermococcus litoralis DSM 5473
94 1556236 1556445 + NZ_LR881183.1 Thermococcus camini
95 1859811 1860008 - NZ_CP071057.1 Marinicauda algicola
96 117718 117924 + NZ_CP064876.1 Bacillus toyonensis
97 1679102 1679302 + NZ_CP010835.1 Pyrococcus kukulkanii
98 3312427 3312630 + NC_017672.3 Paenibacillus mucilaginosus K02
99 1527287 1527484 + NZ_CP007140.1 Thermococcus guaymasensis DSM 11113
100 1032243 1032464 + NZ_CP006867.1 Ignicoccus islandicus DSM 13165
101 1157429 1157626 + NZ_CP015106.1 Thermococcus radiotolerans
102 941571 941786 + NZ_CP014150.1 Paeniclostridium sordellii
103 340294 340500 + NC_015680.1 Pyrococcus yayanosii CH1
104 1408878 1409075 - NC_018015.1 Thermococcus cleftensis
105 409620 409820 + NC_015574.1 Methanobacterium paludis
106 767736 767930 - NC_015574.1 Methanobacterium paludis
107 190718 190915 - NZ_CP015103.1 Thermococcus siculi
108 1413086 1413283 + NZ_CP006965.1 Thermococcus paralvinellae
109 1298338 1298535 + NC_014804.1 Thermococcus barophilus MP
110 4128327 4128551 + NZ_CP009530.1 Methanosarcina barkeri 227
111 1659791 1659997 + NC_015320.1 Archaeoglobus veneficus SNP6
112 2103460 2103669 + NZ_LT900021.1 Thermococcus henrietii
113 43692 43889 + NZ_CP008887.1 Thermococcus eurythermalis
114 885203 885412 + NZ_CP045696.1 Sodaliphilus pleomorphus
115 1023498 1023683 - NZ_LR134442.1 Propionibacterium australiense
116 113300 113500 + NZ_CP029463.1 Flavobacterium sediminis
117 1093789 1093992 - NC_003901.1 Methanosarcina mazei Go1
118 1564596 1564823 + NZ_CP015756.1 Clostridium estertheticum subsp. estertheticum
119 1219865 1220071 - NC_011529.1 Thermococcus onnurineus NA1
120 1807253 1807450 - NC_007955.1 Methanococcoides burtonii DSM 6242
121 3556670 3556870 + NZ_CP033929.1 Chryseobacterium indoltheticum
122 1181657 1181854 - NC_006624.1 Thermococcus kodakarensis KOD1
123 1143492 1143707 - NC_014761.1 Oceanithermus profundus DSM 14977
124 3483623 3483823 + NZ_CP071376.1 Clostridium gasigenes
125 381641 381832 + NZ_LR215048.1 Acholeplasma axanthum
126 172774 172968 + NZ_AP014612.1 Streptococcus troglodytae
127 2020550 2020717 + NZ_CP065729.1 Macrococcus caseolyticus
128 191647 191853 - NZ_CP065712.1 Staphylococcus auricularis
129 1714332 1714523 - NZ_CP013745.1 Arthrobacter alpinus
130 2493875 2494078 - NZ_CP041970.1 Acinetobacter dispersus
131 884400 884606 + NZ_CP022680.1 Streptococcus respiraculi
132 898456 898665 - NZ_CP014854.1 Thermococcus celer Vu 13 = JCM 8558
133 1013078 1013263 - NZ_AP017470.1 Thermotomaculum hydrothermale
134 178287 178490 - NZ_CP013023.1 Paenibacillus bovis
135 2684689 2684880 + NC_013665.1 Methanocella paludicola SANAE
136 1458510 1458719 + NZ_CP007264.1 Thermococcus nautili
137 668808 669005 - NZ_CP014750.1 Thermococcus peptonophilus
138 1714827 1715027 - NZ_CP019352.1 Lacinutrix venerupis
139 728009 728203 + NZ_CP043405.1 Streptococcus ratti
140 3307354 3307557 - NC_007796.1 Methanospirillum hungatei JF-1
141 356191 356385 - NC_014507.1 Methanolacinia petrolearia DSM 11571
142 2338575 2338775 + NZ_CP015378.1 Fictibacillus phosphorivorans
143 2183014 2183190 - NZ_CP015378.1 Fictibacillus phosphorivorans
144 1300877 1301074 - NZ_CP032364.1 Lachnoanaerobaculum umeaense
145 2260804 2261004 - NZ_AP019736.1 Alistipes dispar
146 2166832 2167065 - NZ_CP017237.1 Moorella thermoacetica
147 1186013 1186210 - NZ_CP006019.1 Palaeococcus pacificus DY20341
148 715543 715746 + NZ_CP017705.1 Brevibacillus laterosporus DSM 25
149 1028067 1028261 + NZ_CP027563.1 Weissella confusa
150 398897 399112 - NZ_CP029487.1 Eubacterium maltosivorans
151 1804517 1804723 - NZ_LT906464.1 Staphylococcus muscae
152 3848889 3849089 + NZ_CP048106.1 Pontibacter pudoricolor
153 1260600 1260806 + NZ_CP049740.1 Jeotgalibaca arthritidis
154 4888332 4888535 + NC_003552.1 Methanosarcina acetivorans C2A
155 1726829 1727038 - NC_009712.1 Methanoregula boonei 6A8
156 4197780 4198004 + NZ_CP009520.1 Methanosarcina vacuolata Z-761
157 1842163 1842387 + NC_015416.1 Methanothrix soehngenii GP6
158 573386 573589 + NZ_CP009516.1 Methanosarcina horonobensis HB-1 = JCM 15518
159 729943 730140 + NZ_CP038012.1 Sporosarcina pasteurii
160 2134229 2134423 - NC_014041.1 Zunongwangia profunda SM-A87
161 1219719 1219931 - NZ_CP022983.1 Cytobacillus kochii
162 453811 454014 + NZ_CP006950.1 Dehalococcoides mccartyi CG4
163 2856880 2857074 - NC_018664.1 Gottschalkia acidurici 9a
164 2074667 2074861 + NZ_CP017480.1 Luteibacter rhizovicinus DSM 16549
165 677602 677814 + NZ_CP022413.2 Blautia hansenii DSM 20583
166 3576028 3576228 - NZ_LR215974.1 Chryseobacterium taihuense
167 393278 393478 + NZ_LT607756.1 Methanobacterium congolense
168 2324298 2324504 - NZ_LT607756.1 Methanobacterium congolense
169 2148456 2148653 - NZ_CP010896.1 Pseudomonas simiae
170 449536 449736 - NZ_CP022743.1 Mucilaginibacter xinganensis
171 784475 784660 - NZ_LT906439.1 Streptococcus merionis
172 297627 297830 + NZ_CP026606.1 Methanococcus maripaludis
173 1024809 1025009 + NZ_CP017479.1 Flavobacterium gilvum
174 1639418 1639618 - NZ_LN999010.1 Thermococcus chitonophagus
175 140030 140233 - NZ_CP009149.1 Methanocaldococcus bathoardescens
176 682812 683027 - NZ_CP009515.1 Methanosarcina lacustris Z-7289
177 2607851 2608057 - NC_009464.1 Methanocella arvoryzae MRE50
178 2864531 2864728 - NZ_LR588407.1 Brevundimonas vancanneytii
179 392566 392751 + NZ_LT906444.1 Listeria welshimeri
180 711153 711371 - NZ_LR698975.1 Methanosphaera stadtmanae
181 5333249 5333449 + NZ_CP048833.1 Pseudomonas multiresinivorans
182 833344 833544 + NZ_CP019698.1 Desulfotomaculum ferrireducens
183 424420 424620 + NZ_CP007155.1 Kutzneria albida DSM 43870
184 1223184 1223369 + NZ_CP048649.1 Aminipila butyrica
185 7263695 7263898 + NZ_LN831776.1 Paenibacillus riograndensis SBR5
186 1613904 1614107 + NZ_CP045293.1 Paenibacillus guangzhouensis
187 380316 380534 + NZ_CP021780.1 Paenibacillus donghaensis
188 2708788 2708982 + NZ_CP031222.1 Aquirhabdus parva
189 257449 257649 + NC_000909.1 Methanocaldococcus jannaschii DSM 2661
190 4300038 4300235 - NC_016584.1 Desulfosporosinus orientis DSM 765
191 4168874 4169068 - NZ_CP041046.1 Luteibacter pinisoli
192 176279 176485 - NC_016894.1 Acetobacterium woodii DSM 1030
193 4474133 4474342 + NC_014759.1 Marivirga tractuosa DSM 4126
194 1211085 1211276 + NZ_CP034234.1 Erysipelothrix piscisicarius
195 2385154 2385345 + NZ_CP012669.1 Altererythrobacter epoxidivorans
196 2440848 2441045 + NZ_CP023671.1 Clostridium septicum
197 355526 355723 - NC_013891.1 Listeria seeligeri serovar 1/2b str. SLCC3954
198 2143874 2144083 + NZ_AP019781.1 Methanoculleus chikugoensis
199 3936804 3936995 - NZ_CP037952.1 Parashewanella spongiae
200 1598296 1598505 - NZ_CP004393.1 Celeribacter indicus
201 1296489 1296683 + NC_018515.1 Desulfosporosinus meridiei DSM 13257
202 5774105 5774305 - NZ_AP017313.1 Mucilaginibacter gotjawali
203 3115830 3116021 - NZ_CP031961.1 Pseudoalteromonas tunicata
204 1734866 1735066 + NC_018068.1 Desulfosporosinus acidiphilus SJ4
205 85382 85558 + NZ_LS483306.1 Enterococcus cecorum
206 638597 638791 + NC_009253.1 Desulfotomaculum reducens MI-1
207 3116591 3116788 - NZ_CP028136.1 Gramella fulva
208 4362510 4362704 + NZ_CP020472.1 Shewanella japonica
209 4238317 4238517 - NZ_CP012395.1 Clostridium autoethanogenum DSM 10061
210 2001767 2001967 - NC_014328.1 Clostridium ljungdahlii DSM 13528
211 398470 398667 - NZ_CP009577.1 Listeria ivanovii subsp. ivanovii
212 504992 505192 - NZ_LT635772.1 Anaerococcus mediterraneensis
213 424714 424899 + NZ_LR134089.1 Staphylococcus saprophyticus
214 4183664 4183867 + NZ_CP009506.1 Methanosarcina siciliae T4/M
215 22424 22627 - NZ_CP011803.1 Clostridium carboxidivorans P7
216 2188723 2188884 + NZ_LT990039.1 Massilistercora timonensis
217 2781054 2781248 - NC_013595.1 Streptosporangium roseum DSM 43021
218 2284560 2284748 - NZ_CP053642.1 Actinomyces marmotae
219 809872 810066 - NZ_CP067012.1 Corynebacterium kefirresidentii
220 2358830 2359033 - NZ_LN734822.1 Methanobacterium formicicum
221 794076 794264 + NC_014963.1 Terriglobus saanensis SP1PR4
222 4554838 4555044 + NC_002516.2 Pseudomonas aeruginosa PAO1
223 1469345 1469545 + NZ_CP016895.1 Acinetobacter larvae
224 3535951 3536139 + NZ_CP046908.1 Stappia indica
225 2674892 2675089 - NZ_CP062253.1 Pseudomonas gozinkensis
226 2572604 2572801 - NZ_CP062252.1 Pseudomonas allokribbensis
227 2944124 2944333 - NZ_CP007032.1 Desulfitobacterium metallireducens DSM 15288
228 1197324 1197515 - NZ_CP065748.1 Delftia lacustris
229 1012180 1012371 + NZ_CP017420.1 Delftia tsuruhatensis
230 5297791 5297985 - NZ_CP013480.3 Pandoraea norimbergensis
231 1807438 1807647 + NC_009051.1 Methanoculleus marisnigri JR1
232 2980933 2981112 + NZ_CP022464.2 Enterocloster bolteae
233 245787 245951 - NZ_CP040676.1 Exiguobacterium mexicanum
234 154511 154720 - NC_009901.1 Shewanella pealeana ATCC 700345
235 5080744 5080953 + NC_010334.1 Shewanella halifaxensis HAW-EB4
236 434359 434553 - NZ_CP016094.1 Lacunisphaera limnophila
237 349400 349600 + NC_020541.1 Rhodanobacter denitrificans
238 1389401 1389604 + NZ_CP023705.1 Sphingomonas melonis
239 702397 702561 - NZ_CP009122.1 Sphingopyxis fribergensis
240 1935579 1935773 + NZ_CP016809.1 Paenibacillus ihbetae
241 694045 694239 - NZ_LS483460.1 Corynebacterium minutissimum
242 3356190 3356387 - NC_011144.1 Phenylobacterium zucineum HLK1
243 2103975 2104172 - NZ_CP031092.1 Salicibibacter kimchii
244 531986 532225 - NZ_CP035758.1 Ktedonosporobacter rubrisoli
245 600759 600965 + NZ_CP035758.1 Ktedonosporobacter rubrisoli
246 629743 629937 + NZ_CP019659.1 Paenibacillus larvae subsp. larvae
247 3595012 3595212 + NZ_CP014841.1 Dyella thiooxydans
248 2562411 2562605 + NZ_LR130778.1 Petrocella atlantisensis
249 1413889 1414080 + NZ_CP024920.1 Qipengyuania seohaensis
250 51037 51234 + NC_007322.2 Bacillus anthracis str. 'Ames Ancestor'
251 3180191 3180376 + NZ_CP011452.2 Croceibacterium atlanticum
252 1089363 1089554 + NZ_AP019779.1 Methanobrevibacter arboriphilus
253 2211131 2211325 + NZ_AP019779.1 Methanobrevibacter arboriphilus
254 1535482 1535703 + NC_009634.1 Methanococcus vannielii SB
255 925783 925977 + NZ_CP017768.1 Methanobacterium subterraneum
256 1010446 1010643 + NZ_CP011041.1 Pseudoalteromonas tetraodonis
257 996522 996719 + NZ_CP011030.1 Pseudoalteromonas issachenkonii
258 187423 187623 + NZ_CP011150.1 Bacillus altitudinis
259 1038209 1038397 - NC_015259.1 Polymorphum gilvum SL003B-26A1
260 442371 442589 + NZ_CP072844.1 Psychrosphaera aestuarii
261 4084864 4085070 + NZ_CP022272.1 Shewanella marisflavi
262 3919072 3919263 - NZ_LT907988.1 Orrella dioscoreae
263 378545 378748 + NZ_CP042593.1 Bacillus dafuensis
264 1245147 1245341 + NZ_CP034248.1 Paenibacillus lentus
265 3921828 3922040 + NZ_CP020083.1 Blastomonas fulva
266 361944 362147 - NZ_CP061038.1 Sphingomonas alpina
267 2823593 2823781 + NZ_CP003915.1 Advenella mimigardefordensis DPN7
268 962129 962314 - NZ_CP011541.1 Corynebacterium epidermidicanis
269 817801 817986 - NZ_CP018911.1 Glycocaulis alkaliphilus
270 438149 438340 + NC_014151.1 Cellulomonas flavigena DSM 20109
271 2320030 2320194 + NC_008048.1 Sphingopyxis alaskensis RB2256
272 541901 542089 + NC_014816.1 Asticcacaulis excentricus CB 48
273 1477818 1478024 - NZ_CP041305.1 Cytobacillus ciccensis
274 1199977 1200171 + NC_015216.1 Methanobacterium lacus
275 419058 419264 - NZ_CP015520.1 Thermococcus piezophilus
276 1614573 1614788 + NZ_CP019285.1 Halobiforma lacisalsi AJ5
277 1422332 1422535 - NZ_LS974202.1 Mesotoga infera
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