Result : EXP03841
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP03841 |
| NCBI Accession ID | |
| Organism | Butyricicoccus |
| Left | |
| Right | |
| Strand | |
| Nucleotide Sequence | ATGGCCGCAGCTGAGAGCATCACTGAAACACTCAAGGCAGATGACCAGATGGAATGGGTACGCCGTATGAATAACGTTCAAAATCGTGCCAGAGAAATCGTCAATTCCGAACTGATTTACAACGAAACGAACCCGGAGCACAGGCCGTAA |
| Sequence | MAAAESITETLKADDQMEWVRRMNNVQNRAREIVNSELIYNETNPEHRP |
| Source of smORF | Metagenomic Ribo-seq |
| Function | |
| Pubmed ID | 32601270 |
| Domain | |
| Functional Category | Function not yet assigned |
| Uniprot ID | |
| ORF Length (Amino Acid) | 49 |
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| Conservation Analysis |
No. of Species: 17
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3390539 | 3390664 | + | NZ_CP036170.1 | [Clostridium] scindens ATCC 35704 |
| 2 | 1934988 | 1935113 | - | NZ_CP030777.1 | Faecalibacterium prausnitzii |
| 3 | 2302360 | 2302485 | + | NZ_CP030777.1 | Faecalibacterium prausnitzii |
| 4 | 733674 | 733799 | + | NZ_CP030777.1 | Faecalibacterium prausnitzii |
| 5 | 1916172 | 1916297 | - | NZ_CP030777.1 | Faecalibacterium prausnitzii |
| 6 | 2255851 | 2255976 | - | NZ_CP048649.1 | Aminipila butyrica |
| 7 | 696830 | 696955 | + | NZ_CP039126.1 | Blautia producta |
| 8 | 4323416 | 4323541 | - | NZ_CP039126.1 | Blautia producta |
| 9 | 680352 | 680477 | + | NZ_CP039126.1 | Blautia producta |
| 10 | 1336284 | 1336409 | - | NZ_CP070062.1 | Coprococcus comes |
| 11 | 2717537 | 2717662 | + | NZ_CP070062.1 | Coprococcus comes |
| 12 | 2667943 | 2668092 | - | NZ_CP070062.1 | Coprococcus comes |
| 13 | 1938979 | 1939104 | + | NZ_CP070062.1 | Coprococcus comes |
| 14 | 1525906 | 1526031 | - | NZ_CP070062.1 | Coprococcus comes |
| 15 | 2350241 | 2350366 | + | NZ_CP070062.1 | Coprococcus comes |
| 16 | 2224246 | 2224371 | + | NZ_CP070062.1 | Coprococcus comes |
| 17 | 72562 | 72687 | - | NZ_CP022413.2 | Blautia hansenii DSM 20583 |
| 18 | 1965434 | 1965559 | - | NZ_CP022413.2 | Blautia hansenii DSM 20583 |
| 19 | 103368 | 103493 | - | NZ_CP027002.1 | [Ruminococcus] gnavus ATCC 29149 |
| 20 | 2757532 | 2757657 | + | NZ_CP027002.1 | [Ruminococcus] gnavus ATCC 29149 |
| 21 | 338332 | 338457 | + | NZ_LR699011.1 | Roseburia hominis |
| 22 | 3291400 | 3291525 | - | NZ_LR699011.1 | Roseburia hominis |
| 23 | 380957 | 381094 | + | NZ_LR699011.1 | Roseburia hominis |
| 24 | 2913146 | 2913271 | - | NZ_LR699011.1 | Roseburia hominis |
| 25 | 1585791 | 1585916 | - | NZ_LR699011.1 | Roseburia hominis |
| 26 | 361101 | 361235 | + | NZ_LR699011.1 | Roseburia hominis |
| 27 | 3075886 | 3076011 | + | NZ_CP048436.1 | Flavonifractor plautii |
| 28 | 1440957 | 1441082 | + | NZ_LR027880.1 | Roseburia intestinalis L1-82 |
| 29 | 1652643 | 1652771 | + | NZ_LR027880.1 | Roseburia intestinalis L1-82 |
| 30 | 3033557 | 3033682 | + | NZ_LR027880.1 | Roseburia intestinalis L1-82 |
| 31 | 3839876 | 3840001 | - | NZ_LR027880.1 | Roseburia intestinalis L1-82 |
| 32 | 2799105 | 2799239 | - | NZ_LR027880.1 | Roseburia intestinalis L1-82 |
| 33 | 1467572 | 1467697 | + | NZ_LR027880.1 | Roseburia intestinalis L1-82 |
| 34 | 2210039 | 2210164 | - | NZ_LR027880.1 | Roseburia intestinalis L1-82 |
| 35 | 6469793 | 6469918 | - | NZ_CP022464.2 | Enterocloster bolteae |
| 36 | 3655806 | 3655934 | - | NZ_CP022464.2 | Enterocloster bolteae |
| 37 | 548588 | 548731 | - | NZ_CP022464.2 | Enterocloster bolteae |
| 38 | 750975 | 751112 | + | NZ_AP022822.1 | Enterococcus saigonensis |
| 39 | 1255438 | 1255563 | - | NZ_CP029256.1 | Christensenella minuta |
| 40 | 1391798 | 1391923 | + | NZ_CP030280.1 | Blautia argi |
| 41 | 318701 | 318829 | + | NZ_CP030280.1 | Blautia argi |
| 42 | 2874309 | 2874458 | - | NZ_CP030280.1 | Blautia argi |
| 43 | 30871 | 31005 | + | NZ_LT635479.1 | Lachnoclostridium phocaeense |
| 44 | 549333 | 549458 | + | NZ_LT635479.1 | Lachnoclostridium phocaeense |
| 45 | 2273623 | 2273757 | + | NZ_CP034413.2 | Dysosmobacter welbionis |
| 46 | 948617 | 948742 | + | NZ_CP034413.2 | Dysosmobacter welbionis |
| 47 | 545812 | 545937 | + | NZ_LT632322.1 | Murdochiella vaginalis |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP036170.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01381.24 | 0.65 | 11 | 884.0 | same-strand | Helix-turn-helix |
| 2 | PF12844.9 | 0.65 | 11 | 1054 | opposite-strand | Helix-turn-helix domain |
| 3 | PF13443.8 | 0.65 | 11 | 671 | same-strand | Cro/C1-type HTH DNA-binding domain |
++ More..