Result : EXP03749
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP03749 |
| NCBI Accession ID | |
| Organism | Leptotrichia,Clostridium |
| Left | |
| Right | |
| Strand | |
| Nucleotide Sequence | ATGATGGTATCTTCAGAAATGCCGGAATTATTAGCTGTATGTGATAAAATAGCAGTATTTAAAGAGGGAGAAATAGCTAAAATTTTATCTATAGAAGAAGCTTCAGAAGAAGTAATAATGCAAATATTAACTAGTGAAGGAGAAGAATAA |
| Sequence | MMVSSEMPELLAVCDKIAVFKEGEIAKILSIEEASEEVIMQILTSEGEE |
| Source of smORF | Metagenomic Ribo-seq |
| Function | |
| Pubmed ID | 32601270 |
| Domain | |
| Functional Category | Function not yet assigned |
| Uniprot ID | |
| ORF Length (Amino Acid) | 49 |
++ More..
| Conservation Analysis |
No. of Species: 158
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 286246 | 286395 | + | NZ_AP019822.1 | Pseudoleptotrichia goodfellowii |
| 2 | 3227098 | 3227244 | - | NZ_CP020028.1 | Paenibacillus kribbensis |
| 3 | 2589617 | 2589757 | + | NZ_CP020028.1 | Paenibacillus kribbensis |
| 4 | 2436090 | 2436224 | - | NZ_CP034909.1 | Ensifer alkalisoli |
| 5 | 1920389 | 1920529 | - | NZ_CP034909.1 | Ensifer alkalisoli |
| 6 | 2986244 | 2986381 | + | NZ_CP034909.1 | Ensifer alkalisoli |
| 7 | 3951972 | 3952106 | - | NZ_CP041335.1 | Chitinolyticbacter meiyuanensis |
| 8 | 2430121 | 2430255 | - | NZ_CP023067.1 | Ensifer sojae CCBAU 05684 |
| 9 | 2757062 | 2757196 | - | NZ_CP013107.1 | Sinorhizobium americanum |
| 10 | 2650037 | 2650171 | - | NZ_CP029451.1 | Sinorhizobium fredii CCBAU 25509 |
| 11 | 1301306 | 1301440 | - | NC_020560.1 | Sinorhizobium meliloti 2011 |
| 12 | 3255521 | 3255655 | - | NZ_CP041238.1 | Ensifer mexicanus |
| 13 | 4928632 | 4928781 | - | NZ_CP048000.1 | Anaerocolumna sedimenticola |
| 14 | 992795 | 992926 | - | NZ_CP048000.1 | Anaerocolumna sedimenticola |
| 15 | 1315598 | 1315720 | + | NZ_CP065915.1 | Pelagovum pacificum |
| 16 | 323849 | 323986 | + | NZ_CP020772.1 | Halobacillus mangrovi |
| 17 | 2234776 | 2234898 | + | NZ_CP060436.1 | Pseudooceanicola algae |
| 18 | 3271805 | 3271942 | - | NZ_CP071612.1 | Rhizobium bangladeshense |
| 19 | 144986 | 145126 | - | NZ_CP015231.1 | Epibacterium mobile F1926 |
| 20 | 2609675 | 2609809 | - | NZ_CP015880.1 | Ensifer adhaerens |
| 21 | 3271397 | 3271519 | - | NZ_CP031555.1 | Thalassospira indica |
| 22 | 1751002 | 1751151 | - | NC_014364.1 | Sediminispirochaeta smaragdinae DSM 11293 |
| 23 | 2871723 | 2871848 | - | NC_014364.1 | Sediminispirochaeta smaragdinae DSM 11293 |
| 24 | 847929 | 848057 | + | NZ_CP011797.1 | Reinekea forsetii |
| 25 | 1059428 | 1059577 | + | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 26 | 1534722 | 1534862 | - | NZ_LR594046.1 | Streptococcus dysgalactiae |
| 27 | 2658057 | 2658179 | - | NZ_CP024199.1 | Thalassospira marina |
| 28 | 2677119 | 2677265 | + | NC_017672.3 | Paenibacillus mucilaginosus K02 |
| 29 | 3385114 | 3385236 | - | NZ_CP024848.1 | Oceanobacillus zhaokaii |
| 30 | 1289183 | 1289323 | - | NZ_CP032627.1 | Lactococcus allomyrinae |
| 31 | 3759306 | 3759443 | - | NZ_CP071678.1 | Rhizobium ruizarguesonis |
| 32 | 3371531 | 3371668 | - | NZ_CP071604.1 | Rhizobium binae |
| 33 | 4060266 | 4060388 | - | NZ_CP045201.1 | Pseudopuniceibacterium antarcticum |
| 34 | 3988838 | 3988975 | + | NZ_CP045201.1 | Pseudopuniceibacterium antarcticum |
| 35 | 3929686 | 3929823 | + | NZ_CP054021.1 | Rhizobium indicum |
| 36 | 3378150 | 3378287 | - | NZ_CP013532.1 | Rhizobium phaseoli |
| 37 | 3024444 | 3024581 | - | NZ_CP034998.1 | Rhizobium acidisoli |
| 38 | 3237635 | 3237772 | - | NZ_CP020906.1 | Rhizobium etli |
| 39 | 3361187 | 3361324 | - | NZ_CP013500.1 | Rhizobium esperanzae |
| 40 | 2690401 | 2690538 | - | NC_020059.1 | Rhizobium tropici CIAT 899 |
| 41 | 1141729 | 1141866 | + | NZ_CP054027.1 | Rhizobium hidalgonense |
| 42 | 2776146 | 2776283 | + | NZ_CP006877.1 | Rhizobium gallicum bv. gallicum R602sp |
| 43 | 686374 | 686511 | - | NZ_CP071454.1 | Rhizobium lentis |
| 44 | 2245229 | 2245369 | + | NC_015730.1 | Roseobacter litoralis Och 149 |
| 45 | 1209204 | 1209326 | - | NZ_CP012023.1 | Celeribacter marinus |
| 46 | 1200689 | 1200829 | + | NZ_LR134293.1 | Streptococcus canis |
| 47 | 511022 | 511153 | + | NC_020134.1 | Thermoclostridium stercorarium subsp. stercorarium DSM 8532 |
| 48 | 3374274 | 3374414 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 49 | 4715478 | 4715615 | + | NZ_CP033433.1 | Cohnella candidum |
| 50 | 2127163 | 2127303 | - | NZ_CP026047.1 | Raoultella planticola |
| 51 | 1924068 | 1924205 | - | NZ_CP053856.1 | Rhizobium pusense |
| 52 | 2811474 | 2811611 | + | NZ_CP048632.1 | Rhizobium oryzihabitans |
| 53 | 2066406 | 2066543 | - | NZ_CP061003.1 | Agrobacterium tumefaciens |
| 54 | 2693204 | 2693326 | - | NZ_CP004388.1 | Thalassospira xiamenensis M-5 = DSM 17429 |
| 55 | 346128 | 346250 | - | NZ_CP061502.1 | Roseicitreum antarcticum |
| 56 | 2555813 | 2555935 | + | NZ_CP034346.1 | Paenibacillus lutimineralis |
| 57 | 841388 | 841528 | - | NC_002678.2 | Mesorhizobium japonicum MAFF 303099 |
| 58 | 1010627 | 1010776 | + | NZ_CP031700.1 | Neisseria zalophi |
| 59 | 2010483 | 2010641 | - | NZ_CP018804.1 | Histophilus somni |
| 60 | 1038077 | 1038244 | + | NC_016048.1 | Oscillibacter valericigenes Sjm18-20 |
| 61 | 3417001 | 3417126 | - | NZ_LR134340.1 | Escherichia marmotae |
| 62 | 292101 | 292229 | - | NZ_CP007142.1 | Gynuella sunshinyii YC6258 |
| 63 | 322135 | 322275 | + | NZ_CP054614.1 | Paenibacillus barcinonensis |
| 64 | 3533132 | 3533266 | + | NZ_CP021850.1 | Pseudoclostridium thermosuccinogenes |
| 65 | 3595157 | 3595282 | + | NZ_CP013862.1 | Lentibacillus amyloliquefaciens |
| 66 | 5183315 | 5183455 | + | NZ_CP046672.1 | Raoultella ornithinolytica |
| 67 | 5751565 | 5751705 | + | NZ_CP060111.1 | Klebsiella michiganensis |
| 68 | 359028 | 359168 | - | NC_015968.1 | Enterobacter soli |
| 69 | 4163838 | 4163978 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 70 | 87058 | 87198 | - | NZ_CP015113.1 | Kosakonia radicincitans |
| 71 | 502723 | 502860 | + | NZ_LR594050.1 | Streptococcus porcinus |
| 72 | 5690290 | 5690430 | + | NZ_CP036175.1 | Klebsiella huaxiensis |
| 73 | 4893704 | 4893844 | + | NZ_CP041247.1 | Raoultella electrica |
| 74 | 3518924 | 3519064 | + | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 75 | 4882438 | 4882572 | + | NZ_CP007139.1 | Fimbriimonas ginsengisoli Gsoil 348 |
| 76 | 4978918 | 4979058 | + | NZ_CP014007.2 | Kosakonia oryzae |
| 77 | 3665293 | 3665436 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 78 | 6093978 | 6094121 | - | NZ_CP009287.1 | Paenibacillus graminis |
| 79 | 4682444 | 4682584 | + | NZ_CP023525.1 | Cedecea neteri |
| 80 | 4246843 | 4246983 | + | NZ_LR134201.1 | Cedecea lapagei |
| 81 | 7072613 | 7072756 | - | NZ_CP009285.1 | Paenibacillus borealis |
| 82 | 4885168 | 4885320 | - | NZ_CP063458.1 | Humisphaera borealis |
| 83 | 1378939 | 1379094 | - | NZ_CP034328.1 | Tabrizicola piscis |
| 84 | 2173289 | 2173444 | + | NZ_LR130778.1 | Petrocella atlantisensis |
| 85 | 2486893 | 2487042 | + | NZ_LR130778.1 | Petrocella atlantisensis |
| 86 | 1505599 | 1505742 | - | NZ_CP012152.1 | Anoxybacillus gonensis |
| 87 | 2514546 | 2514677 | - | NZ_CP018845.1 | Herbaspirillum robiniae |
| 88 | 752705 | 752842 | - | NZ_LR134341.1 | Streptococcus pseudoporcinus |
| 89 | 566613 | 566759 | + | NZ_CP017237.1 | Moorella thermoacetica |
| 90 | 197603 | 197725 | - | NZ_CP040761.1 | Paracoccus liaowanqingii |
| 91 | 1950966 | 1951112 | - | NC_015436.1 | Sphaerochaeta coccoides DSM 17374 |
| 92 | 1054158 | 1054295 | + | NZ_CP017194.1 | Lactococcus carnosus |
| 93 | 5476648 | 5476788 | - | NZ_CP015318.1 | Mesorhizobium amorphae CCNWGS0123 |
| 94 | 1387396 | 1387521 | + | NZ_AP018437.1 | Pelolinea submarina |
| 95 | 2889033 | 2889173 | - | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 96 | 324456 | 324581 | + | NZ_CP028926.1 | Pasteurella multocida |
| 97 | 4309448 | 4309588 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 98 | 5197335 | 5197475 | + | NZ_CP050508.1 | Raoultella terrigena |
| 99 | 62832 | 62972 | + | NZ_CP045296.1 | Paenibacillus cellulositrophicus |
| 100 | 134789 | 134926 | - | NZ_CP015367.1 | Methylobacterium phyllosphaerae |
| 101 | 1288488 | 1288613 | + | NZ_LT906448.1 | Pasteurella dagmatis |
| 102 | 780606 | 780743 | - | NZ_CP003811.1 | Methylobacterium oryzae CBMB20 |
| 103 | 2830002 | 2830136 | - | NZ_CP026377.1 | Mixta gaviniae |
| 104 | 4246156 | 4246290 | - | NZ_LS483476.1 | Lederbergia lentus |
| 105 | 1097055 | 1097180 | + | NZ_LT906463.1 | Haemophilus pittmaniae |
| 106 | 1339635 | 1339778 | - | NZ_CP046293.1 | Yersinia intermedia |
| 107 | 1712447 | 1712605 | + | NZ_LT635480.1 | Ndongobacter massiliensis |
| 108 | 1163883 | 1164008 | - | NZ_CP029256.1 | Christensenella minuta |
| 109 | 2174692 | 2174829 | + | NZ_CP021780.1 | Paenibacillus donghaensis |
| 110 | 834320 | 834460 | + | NZ_LT632322.1 | Murdochiella vaginalis |
| 111 | 1163658 | 1163798 | - | NZ_CP019728.1 | Jeotgalibaca dankookensis |
| 112 | 1233217 | 1233357 | + | NZ_CP049889.1 | Jeotgalibaca porci |
| 113 | 391594 | 391725 | - | NZ_CP048832.1 | Janthinobacterium lividum |
| 114 | 721726 | 721875 | - | NC_022657.1 | Actinoplanes friuliensis DSM 7358 |
| 115 | 1919645 | 1919770 | - | NZ_CP070062.1 | Coprococcus comes |
| 116 | 1335481 | 1335624 | + | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 117 | 4597140 | 4597262 | - | NC_022524.1 | Bacillus infantis NRRL B-14911 |
| 118 | 490391 | 490528 | + | NC_015577.1 | Treponema azotonutricium ZAS-9 |
| 119 | 5205272 | 5205412 | - | NZ_CP045298.1 | Paenibacillus brasilensis |
| 120 | 1754773 | 1754907 | + | NZ_CP013232.1 | Collimonas fungivorans |
| 121 | 5041055 | 5041177 | - | NZ_LT960614.1 | Hartmannibacter diazotrophicus |
| 122 | 1527801 | 1527941 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 123 | 2449055 | 2449189 | + | NC_021505.1 | Pseudomonas putida NBRC 14164 |
| 124 | 2696610 | 2696744 | - | NZ_CP061511.1 | Mixta calida |
| 125 | 155921 | 156049 | + | NC_014652.1 | Caldicellulosiruptor hydrothermalis 108 |
| 126 | 3534562 | 3534702 | - | NZ_CP014167.1 | Paenibacillus yonginensis |
| 127 | 657344 | 657481 | - | NC_010505.1 | Methylobacterium radiotolerans JCM 2831 |
| 128 | 4318591 | 4318743 | - | NZ_CP056030.1 | Pseudomonas eucalypticola |
| 129 | 129842 | 129970 | + | NC_014392.1 | Caldicellulosiruptor obsidiansis OB47 |
| 130 | 5802212 | 5802373 | - | NZ_CP043998.1 | Clostridium diolis |
| 131 | 1817501 | 1817629 | - | NC_008593.1 | Clostridium novyi NT |
| 132 | 696194 | 696337 | + | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 133 | 2155148 | 2155276 | - | NC_012691.1 | Tolumonas auensis DSM 9187 |
| 134 | 418522 | 418662 | - | NZ_CP023422.1 | Janthinobacterium svalbardensis |
| 135 | 2769416 | 2769544 | - | NZ_CP034791.1 | Caldicellulosiruptor changbaiensis |
| 136 | 4295070 | 4295201 | - | NZ_CP041185.1 | Janthinobacterium tructae |
| 137 | 6148163 | 6148303 | - | NZ_CP020104.1 | Spirosoma aerolatum |
| 138 | 2383612 | 2383740 | - | NC_014410.1 | Thermoanaerobacterium thermosaccharolyticum DSM 571 |
| 139 | 2000670 | 2000798 | - | NZ_LT906477.1 | Clostridium cochlearium |
| 140 | 2487245 | 2487391 | - | NZ_CP024645.1 | Rhizobacter gummiphilus |
| 141 | 596922 | 597047 | - | NZ_CP028103.1 | Fusobacterium varium ATCC 27725 |
| 142 | 1411822 | 1411977 | + | NZ_CP020470.1 | Rhodobacter blasticus |
| 143 | 2528174 | 2528305 | - | NC_006177.1 | Symbiobacterium thermophilum IAM 14863 |
| 144 | 5461841 | 5461978 | + | NZ_CP014263.1 | Spirosoma montaniterrae |
| 145 | 3167886 | 3168017 | + | NZ_CP019706.1 | Pantoea alhagi |
| 146 | 2558734 | 2558859 | - | NZ_LR134378.1 | Lautropia mirabilis |
| 147 | 2380321 | 2380461 | - | NZ_CP035807.1 | Thiospirochaeta perfilievii |
| 148 | 644830 | 644955 | + | NZ_CP028107.1 | Fusobacterium necrophorum subsp. funduliforme |
| 149 | 2768849 | 2768980 | + | NC_015675.1 | Mesorhizobium opportunistum WSM2075 |
| 150 | 563390 | 563515 | + | NZ_CP028106.1 | Fusobacterium gonidiaformans ATCC 25563 |
| 151 | 1119045 | 1119170 | + | NZ_CP016180.1 | Pasteurella skyensis |
| 152 | 1005466 | 1005588 | - | NZ_LR134313.1 | Neisseria canis |
| 153 | 4911161 | 4911295 | - | NZ_CP022464.2 | Enterocloster bolteae |
| 154 | 2359302 | 2359442 | + | NZ_CP022464.2 | Enterocloster bolteae |
| 155 | 4364817 | 4364957 | - | NZ_CP009428.1 | Paenibacillus odorifer |
| 156 | 78162 | 78290 | + | NC_014657.1 | Caldicellulosiruptor owensensis OL |
| 157 | 4077500 | 4077634 | - | NZ_CP018866.1 | Sutcliffiella cohnii |
| 158 | 2483299 | 2483439 | + | NC_010001.1 | Lachnoclostridium phytofermentans ISDg |
| 159 | 517440 | 517574 | + | NC_014829.1 | Evansella cellulosilytica DSM 2522 |
| 160 | 3416168 | 3416344 | - | NZ_CP012040.1 | Cyclobacterium amurskyense |
| 161 | 902335 | 902496 | - | NC_019892.1 | Singulisphaera acidiphila DSM 18658 |
| 162 | 2264055 | 2264177 | - | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 163 | 1032780 | 1032911 | + | NC_011899.1 | Halothermothrix orenii H 168 |
| 164 | 7050277 | 7050399 | - | NZ_CP050063.1 | Spirosoma aureum |
| 165 | 1584169 | 1584312 | + | NZ_CP013652.1 | Paenibacillus naphthalenovorans |
| 166 | 3413300 | 3413455 | - | NC_013720.1 | Pirellula staleyi DSM 6068 |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_AP019822.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF13407.8 | 0.98 | 155 | 1506 | same-strand | Periplasmic binding protein domain |
| 2 | PF02653.18 | 0.97 | 153 | 4.0 | same-strand | Branched-chain amino acid transport system / permease component |
++ More..