Result : EXP03729
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP03729 |
| NCBI Accession ID | |
| Organism | Oscillibacter,Butyricicoccus,Bittarella |
| Left | |
| Right | |
| Strand | |
| Nucleotide Sequence | ATGGCGGGCGGCGGCGTGGCTCTCATCGGTGTCACCCTGGTGCCCCTGCTGTCCGGCCTTTTTACGGTGGGAGGTTGA |
| Sequence | MAGGGVALIGVTLVPLLSGLFTVGG |
| Source of smORF | Metagenomic Ribo-seq |
| Function | |
| Pubmed ID | 32601270 |
| Domain | |
| Functional Category | Function not yet assigned |
| Uniprot ID | |
| ORF Length (Amino Acid) | 25 |
++ More..
| Conservation Analysis |
No. of Species: 49
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 980844 | 980912 | - | NZ_CP034413.2 | Dysosmobacter welbionis |
| 2 | 2294845 | 2294919 | + | NZ_CP034413.2 | Dysosmobacter welbionis |
| 3 | 2924693 | 2924761 | + | NZ_CP034413.2 | Dysosmobacter welbionis |
| 4 | 2441172 | 2441243 | - | NZ_CP034413.2 | Dysosmobacter welbionis |
| 5 | 2859130 | 2859198 | + | NC_016048.1 | Oscillibacter valericigenes Sjm18-20 |
| 6 | 3068023 | 3068088 | - | NC_016048.1 | Oscillibacter valericigenes Sjm18-20 |
| 7 | 2266817 | 2266885 | + | NZ_CP030777.1 | Faecalibacterium prausnitzii |
| 8 | 1906642 | 1906710 | - | NZ_CP030777.1 | Faecalibacterium prausnitzii |
| 9 | 3424813 | 3424881 | + | NZ_CP022121.1 | Dehalobacterium formicoaceticum |
| 10 | 543841 | 543909 | + | NZ_CP022121.1 | Dehalobacterium formicoaceticum |
| 11 | 645351 | 645419 | - | NZ_CP007452.1 | Peptoclostridium acidaminophilum DSM 3953 |
| 12 | 486114 | 486182 | + | NZ_CP029487.1 | Eubacterium maltosivorans |
| 13 | 4217508 | 4217576 | - | NZ_CP029487.1 | Eubacterium maltosivorans |
| 14 | 3486248 | 3486319 | - | NZ_CP029487.1 | Eubacterium maltosivorans |
| 15 | 4033366 | 4033434 | - | NC_014376.1 | [Clostridium] saccharolyticum WM1 |
| 16 | 4032967 | 4033035 | - | NC_014376.1 | [Clostridium] saccharolyticum WM1 |
| 17 | 318190 | 318255 | - | NC_014376.1 | [Clostridium] saccharolyticum WM1 |
| 18 | 508312 | 508380 | + | NZ_LT632322.1 | Murdochiella vaginalis |
| 19 | 433709 | 433777 | + | NZ_LT632322.1 | Murdochiella vaginalis |
| 20 | 4691702 | 4691770 | + | NZ_CP022464.2 | Enterocloster bolteae |
| 21 | 6447270 | 6447341 | - | NZ_CP022464.2 | Enterocloster bolteae |
| 22 | 3277443 | 3277511 | + | NZ_CP036345.1 | Anaerostipes caccae L1-92 |
| 23 | 2124443 | 2124511 | + | NZ_CP046996.1 | Dehalobacter restrictus |
| 24 | 253871 | 253939 | - | NZ_CP049740.1 | Jeotgalibaca arthritidis |
| 25 | 2067247 | 2067315 | - | NZ_CP040058.1 | Anaerostipes rhamnosivorans |
| 26 | 2025175 | 2025243 | + | NZ_CP025286.1 | Ethanoligenens harbinense YUAN-3 |
| 27 | 1901963 | 1902031 | - | NZ_CP025286.1 | Ethanoligenens harbinense YUAN-3 |
| 28 | 54082 | 54150 | + | NZ_LT635479.1 | Lachnoclostridium phocaeense |
| 29 | 2423090 | 2423161 | - | NZ_LT635479.1 | Lachnoclostridium phocaeense |
| 30 | 739513 | 739581 | - | NZ_CP039126.1 | Blautia producta |
| 31 | 2614778 | 2614846 | + | NZ_LR027880.1 | Roseburia intestinalis L1-82 |
| 32 | 1575763 | 1575831 | + | NZ_LR027880.1 | Roseburia intestinalis L1-82 |
| 33 | 1102308 | 1102376 | + | NZ_CP036170.1 | [Clostridium] scindens ATCC 35704 |
| 34 | 3430382 | 3430450 | + | NZ_CP036170.1 | [Clostridium] scindens ATCC 35704 |
| 35 | 1991937 | 1992005 | - | NZ_CP014223.1 | Anaerotignum propionicum DSM 1682 |
| 36 | 3354743 | 3354808 | - | NC_013216.1 | Desulfofarcimen acetoxidans DSM 771 |
| 37 | 732412 | 732483 | - | NZ_LT990039.1 | Massilistercora timonensis |
| 38 | 752432 | 752500 | - | NZ_CP017269.1 | Geosporobacter ferrireducens |
| 39 | 3366690 | 3366755 | + | NZ_LR130778.1 | Petrocella atlantisensis |
| 40 | 407300 | 407371 | + | NZ_LR699011.1 | Roseburia hominis |
| 41 | 2253667 | 2253732 | - | NZ_LR699011.1 | Roseburia hominis |
| 42 | 2770855 | 2770926 | + | NZ_CP027002.1 | [Ruminococcus] gnavus ATCC 29149 |
| 43 | 2736545 | 2736610 | - | NZ_CP048436.1 | Flavonifractor plautii |
| 44 | 2140800 | 2140871 | - | NZ_CP048436.1 | Flavonifractor plautii |
| 45 | 446826 | 446894 | - | NC_016630.1 | Filifactor alocis ATCC 35896 |
| 46 | 520976 | 521044 | - | NC_016630.1 | Filifactor alocis ATCC 35896 |
| 47 | 1292470 | 1292538 | - | NC_016630.1 | Filifactor alocis ATCC 35896 |
| 48 | 1040982 | 1041050 | + | NZ_LT859958.1 | Brevefilum fermentans |
| 49 | 1039051 | 1039119 | + | NZ_LT859958.1 | Brevefilum fermentans |
| 50 | 1952171 | 1952236 | - | NZ_CP022413.2 | Blautia hansenii DSM 20583 |
| 51 | 2067328 | 2067393 | + | NZ_CP009933.1 | Clostridium scatologenes |
| 52 | 256874 | 256939 | - | NC_011837.1 | Clostridium kluyveri NBRC 12016 |
| 53 | 1485364 | 1485432 | - | NZ_CP029256.1 | Christensenella minuta |
| 54 | 3721747 | 3721812 | - | NZ_CP020559.1 | Clostridium formicaceticum |
| 55 | 952131 | 952199 | - | NZ_CP027228.1 | Mogibacterium diversum |
| 56 | 2331822 | 2331887 | - | NZ_CP011102.1 | Listeria weihenstephanensis |
| 57 | 609608 | 609676 | + | NZ_CP066014.1 | Anaerococcus vaginalis |
| 58 | 341007 | 341075 | - | NZ_CP046314.1 | Gemella morbillorum |
| 59 | 893120 | 893188 | + | NZ_CP046314.1 | Gemella morbillorum |
| 60 | 1069418 | 1069486 | - | NZ_CP009761.1 | Parvimonas micra |
| 61 | 762026 | 762094 | + | NZ_AP022822.1 | Enterococcus saigonensis |
| 62 | 1185633 | 1185701 | + | NZ_CP067016.1 | Anaerococcus obesiensis |
| 63 | 1224775 | 1224843 | + | NZ_CP067016.1 | Anaerococcus obesiensis |
| 64 | 540257 | 540325 | - | NZ_LR134341.1 | Streptococcus pseudoporcinus |
| 65 | 622122 | 622190 | - | NZ_LR134341.1 | Streptococcus pseudoporcinus |
| 66 | 1338908 | 1338976 | + | NZ_LR134293.1 | Streptococcus canis |
| 67 | 1058026 | 1058094 | - | NZ_LT635475.1 | Ezakiella massiliensis |
| 68 | 816668 | 816736 | + | NZ_AP019845.1 | Leptotrichia trevisanii |
| 69 | 1148187 | 1148255 | + | NZ_CP022680.1 | Streptococcus respiraculi |
| 70 | 1311933 | 1312001 | - | NZ_CP065061.1 | Streptococcus equi subsp. zooepidemicus |
| 71 | 1436648 | 1436716 | - | NZ_LT635480.1 | Ndongobacter massiliensis |
| 72 | 1348768 | 1348836 | - | NZ_CP070062.1 | Coprococcus comes |
| 73 | 4083150 | 4083215 | - | NC_009633.1 | Alkaliphilus metalliredigens QYMF |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP034413.2
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF12666.9 | 0.84 | 41 | 1159 | same-strand | PrgI family protein |
| 2 | PF19478.1 | 0.98 | 48 | 20 | same-strand | TrbL/VirB6 plasmid conjugal transfer like protein |
| 3 | PF02534.16 | 0.63 | 31 | 354 | same-strand | Type IV secretory system Conjugative DNA transfer |
| 4 | PF12696.9 | 0.73 | 36 | 626.0 | same-strand | TraM recognition site of TraD and TraG |
++ More..