* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000964.3
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF12730.9
|
0.67
|
2
|
2660.0
|
same-strand
|
ABC-2 family transporter protein
|
2
|
PF10710.11
|
1.0
|
3
|
1812
|
opposite-strand
|
Protein of unknown function (DUF2512)
|
3
|
PF07486.14
|
1.0
|
3
|
917
|
same-strand
|
Cell Wall Hydrolase
|
4
|
PF10138.11
|
0.67
|
2
|
81.0
|
same-strand
|
vWA found in TerF C terminus
|
5
|
PF09423.12
|
1.0
|
3
|
19
|
same-strand
|
PhoD-like phosphatase
|
6
|
PF16655.7
|
1.0
|
3
|
19
|
same-strand
|
PhoD-like phosphatase, N-terminal domain
|
7
|
PF16656.7
|
1.0
|
3
|
19
|
same-strand
|
Purple acid Phosphatase, N-terminal domain
|
8
|
PF02416.18
|
1.0
|
3
|
1784
|
same-strand
|
mttA/Hcf106 family
|
9
|
PF00902.20
|
1.0
|
3
|
2056
|
same-strand
|
Sec-independent protein translocase protein (TatC)
|
10
|
PF01470.19
|
1.0
|
3
|
2780
|
opposite-strand
|
Pyroglutamyl peptidase
|
++ More..