Result : EXP03629
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP03629 |
| NCBI Accession ID | |
| Organism | Prevotella,Bacteroides,Alistipes |
| Left | |
| Right | |
| Strand | |
| Nucleotide Sequence | ATGAGAATTATGAAAAAGAATGCAAATGAAATTTTTATGTTACAGTACCGTATCAAACGCTATCAGGCAATGGGTAACGGAACTATGTGCCAAACTTTAAACGGCAAACTGCAAAAACTGCTTGCAAAGCAAGCTGCCATGACCATGTAA |
| Sequence | MRIMKKNANEIFMLQYRIKRYQAMGNGTMCQTLNGKLQKLLAKQAAMTM |
| Source of smORF | Metagenomic Ribo-seq |
| Function | |
| Pubmed ID | 32601270 |
| Domain | |
| Functional Category | Function not yet assigned |
| Uniprot ID | |
| ORF Length (Amino Acid) | 49 |
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| Conservation Analysis |
No. of Species: 11
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 289258 | 289407 | - | NZ_CP027234.1 | Bacteroides heparinolyticus |
| 2 | 1966237 | 1966377 | - | NC_014933.1 | Bacteroides helcogenes P 36-108 |
| 3 | 1340454 | 1340588 | + | NZ_LN877293.1 | Bacteroides fragilis |
| 4 | 3115222 | 3115359 | - | NZ_CP040530.1 | Bacteroides thetaiotaomicron |
| 5 | 6060976 | 6061113 | - | NZ_CP012938.1 | Bacteroides ovatus |
| 6 | 2920619 | 2920759 | - | NZ_CP027231.1 | Bacteroides zoogleoformans |
| 7 | 873060 | 873197 | - | NZ_CP015401.2 | Bacteroides caecimuris |
| 8 | 3236549 | 3236677 | + | NZ_CP069440.1 | Phocaeicola coprophilus |
| 9 | 299315 | 299449 | + | NC_009614.1 | Phocaeicola vulgatus ATCC 8482 |
| 10 | 350563 | 350697 | + | NZ_LR699004.1 | Phocaeicola dorei |
| 11 | 1257516 | 1257647 | - | NZ_CP007034.1 | Barnesiella viscericola DSM 18177 |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP027234.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01841.21 | 0.64 | 7 | 1944 | opposite-strand | Transglutaminase-like superfamily |
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