Result : EXP03567
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP03567 |
| NCBI Accession ID | |
| Organism | Oscillibacter |
| Left | |
| Right | |
| Strand | |
| Nucleotide Sequence | ATGAGCGGCAGCCCGATCGTGCAGGATGGGAAGCTCGTCGGCGCGGTGACGCACGTCCTGCTGGACGACCCGCAGAGAGGTTATGGCATTCTCGCGGAAAATATGCTTTCCGCCTCCGGCATGACGGCGCAAAGCGCAGCGAGCGCCTGA |
| Sequence | MSGSPIVQDGKLVGAVTHVLLDDPQRGYGILAENMLSASGMTAQSAASA |
| Source of smORF | Metagenomic Ribo-seq |
| Function | |
| Pubmed ID | 32601270 |
| Domain | |
| Functional Category | Function not yet assigned |
| Uniprot ID | |
| ORF Length (Amino Acid) | 49 |
++ More..
| Conservation Analysis |
No. of Species: 111
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1218891 | 1219058 | - | NZ_CP045295.1 | Paenibacillus cellulositrophicus |
| 2 | 1104074 | 1104217 | - | NZ_CP034413.2 | Dysosmobacter welbionis |
| 3 | 4782322 | 4782489 | - | NZ_CP009428.1 | Paenibacillus odorifer |
| 4 | 1082863 | 1083009 | + | NC_018515.1 | Desulfosporosinus meridiei DSM 13257 |
| 5 | 3191363 | 3191512 | + | NZ_CP021434.1 | Tumebacillus avium |
| 6 | 3228461 | 3228610 | - | NZ_CP022657.1 | Tumebacillus algifaecis |
| 7 | 738357 | 738512 | + | NC_014098.1 | Kyrpidia tusciae DSM 2912 |
| 8 | 1042278 | 1042433 | + | NZ_CP024955.1 | Kyrpidia spormannii |
| 9 | 3774559 | 3774723 | - | NZ_CP009286.1 | Paenibacillus stellifer |
| 10 | 5491431 | 5491598 | - | NZ_CP009285.1 | Paenibacillus borealis |
| 11 | 2039701 | 2039847 | - | NZ_CP007032.1 | Desulfitobacterium metallireducens DSM 15288 |
| 12 | 4323580 | 4323744 | - | NZ_CP043611.1 | Paenibacillus antarcticus |
| 13 | 1069968 | 1070114 | + | NC_016584.1 | Desulfosporosinus orientis DSM 765 |
| 14 | 839242 | 839415 | + | NC_015520.1 | Mahella australiensis 50-1 BON |
| 15 | 4012866 | 4013030 | + | NZ_CP017705.1 | Brevibacillus laterosporus DSM 25 |
| 16 | 770699 | 770839 | + | NZ_CP025286.1 | Ethanoligenens harbinense YUAN-3 |
| 17 | 3101381 | 3101542 | + | NZ_CP034437.1 | Paenibacillus albus |
| 18 | 863991 | 864146 | + | NZ_CP014342.1 | Geobacillus subterraneus |
| 19 | 2645937 | 2646098 | - | NZ_AP019308.1 | Paenibacillus baekrokdamisoli |
| 20 | 2581168 | 2581329 | + | NZ_CP048209.1 | Paenibacillus lycopersici |
| 21 | 1344380 | 1344511 | - | NC_014392.1 | Caldicellulosiruptor obsidiansis OB47 |
| 22 | 1820247 | 1820396 | - | NC_014378.1 | Acetohalobium arabaticum DSM 5501 |
| 23 | 1439953 | 1440117 | - | NZ_CP054614.1 | Paenibacillus barcinonensis |
| 24 | 1702149 | 1702304 | - | NZ_CP008876.1 | Terribacillus goriensis |
| 25 | 1211937 | 1212068 | + | NC_014657.1 | Caldicellulosiruptor owensensis OL |
| 26 | 4091337 | 4091501 | - | NZ_CP009288.1 | Paenibacillus durus |
| 27 | 714819 | 714968 | + | NC_011899.1 | Halothermothrix orenii H 168 |
| 28 | 2471242 | 2471397 | - | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 29 | 1708979 | 1709119 | - | NC_009922.1 | Alkaliphilus oremlandii OhILAs |
| 30 | 3419927 | 3420097 | + | NC_017672.3 | Paenibacillus mucilaginosus K02 |
| 31 | 3544430 | 3544603 | - | NZ_CP026363.1 | Brevibacillus agri |
| 32 | 1615174 | 1615341 | - | NZ_CP035492.1 | Paenibacillus protaetiae |
| 33 | 3727564 | 3727737 | - | NZ_LR134338.1 | Brevibacillus brevis |
| 34 | 2331939 | 2332115 | - | NZ_CP013652.1 | Paenibacillus naphthalenovorans |
| 35 | 3052901 | 3053062 | - | NZ_CP045293.1 | Paenibacillus guangzhouensis |
| 36 | 3685784 | 3685939 | - | NZ_CP017703.1 | Aeribacillus pallidus |
| 37 | 3463915 | 3464055 | - | NC_018068.1 | Desulfosporosinus acidiphilus SJ4 |
| 38 | 145538 | 145693 | - | NZ_HF545616.1 | Ruminococcus bicirculans |
| 39 | 2428513 | 2428668 | - | NZ_CP023704.1 | Caldibacillus thermoamylovorans |
| 40 | 1086695 | 1086856 | - | NZ_CP048286.1 | Paenibacillus rhizovicinus |
| 41 | 42052 | 42213 | - | NZ_CP017269.1 | Geosporobacter ferrireducens |
| 42 | 2419356 | 2419511 | - | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 43 | 3518828 | 3518983 | + | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 44 | 1619929 | 1620084 | - | NZ_CP061470.1 | Geobacillus zalihae |
| 45 | 1517622 | 1517777 | + | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 46 | 2430106 | 2430273 | + | NZ_CP026520.1 | Paenibacillus chitinolyticus |
| 47 | 1435346 | 1435501 | + | NZ_CP016020.1 | Bacillus weihaiensis |
| 48 | 2788918 | 2789070 | - | NZ_LT603683.1 | Bacillus glycinifermentans |
| 49 | 1573925 | 1574089 | + | NZ_AP017312.1 | Aneurinibacillus soli |
| 50 | 2316159 | 2316311 | - | NZ_CP051464.1 | Bacillus mojavensis |
| 51 | 3738096 | 3738248 | + | NZ_CP029364.1 | Bacillus halotolerans |
| 52 | 2932673 | 2932828 | - | NZ_CP024109.1 | Bacillus cytotoxicus |
| 53 | 3068734 | 3068898 | + | NZ_CP034248.1 | Paenibacillus lentus |
| 54 | 4179374 | 4179529 | - | NZ_CP032365.1 | Bacillus wiedmannii |
| 55 | 4010160 | 4010315 | - | NC_007530.2 | Bacillus anthracis str. 'Ames Ancestor' |
| 56 | 4046975 | 4047130 | - | NZ_CP064875.1 | Bacillus toyonensis |
| 57 | 1188425 | 1188580 | + | NZ_CP040336.1 | Bacillus luti |
| 58 | 2169997 | 2170152 | - | NZ_CP029797.1 | Paraliobacillus zengyii |
| 59 | 4175718 | 4175873 | - | NC_011725.1 | Bacillus cereus B4264 |
| 60 | 2666696 | 2666848 | - | NZ_CP023665.1 | Bacillus paralicheniformis |
| 61 | 3327676 | 3327831 | - | NZ_CP053989.1 | Niallia circulans |
| 62 | 1528153 | 1528305 | + | NZ_CP011937.1 | Bacillus velezensis |
| 63 | 2471653 | 2471805 | - | NZ_CP053376.1 | Bacillus amyloliquefaciens |
| 64 | 2513121 | 2513273 | - | NC_006270.3 | Bacillus licheniformis DSM 13 = ATCC 14580 |
| 65 | 2481892 | 2482044 | - | NZ_CP033052.1 | Bacillus vallismortis |
| 66 | 2392064 | 2392216 | - | NZ_CP048852.1 | Bacillus tequilensis |
| 67 | 2393273 | 2393425 | - | NZ_CP034943.1 | Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 |
| 68 | 1027207 | 1027368 | - | NZ_CP013862.1 | Lentibacillus amyloliquefaciens |
| 69 | 2378839 | 2378991 | - | NZ_CP013984.1 | Bacillus inaquosorum |
| 70 | 2164995 | 2165150 | - | NZ_CP024848.1 | Oceanobacillus zhaokaii |
| 71 | 2519102 | 2519254 | - | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 72 | 1548297 | 1548428 | + | NZ_CP014204.2 | Clostridium baratii |
| 73 | 2901153 | 2901308 | - | NC_002570.2 | Alkalihalobacillus halodurans C-125 |
| 74 | 3321480 | 3321614 | - | NZ_CP009933.1 | Clostridium scatologenes |
| 75 | 4167478 | 4167642 | + | NZ_CP068053.1 | Peribacillus psychrosaccharolyticus |
| 76 | 3073462 | 3073617 | + | NZ_CP043404.1 | Bacillus safensis |
| 77 | 2213270 | 2213425 | - | NZ_CP011150.1 | Bacillus altitudinis |
| 78 | 3161987 | 3162142 | + | NZ_CP017786.1 | Bacillus xiamenensis |
| 79 | 1189632 | 1189769 | + | NC_008593.1 | Clostridium novyi NT |
| 80 | 2436598 | 2436753 | - | NC_017668.1 | Halobacillus halophilus DSM 2266 |
| 81 | 871339 | 871470 | + | NZ_CP016786.1 | Clostridium isatidis |
| 82 | 5165908 | 5166066 | - | NZ_CP063356.1 | Anaerobacillus isosaccharinicus |
| 83 | 2456807 | 2456953 | - | NC_019903.1 | Desulfitobacterium dichloroeliminans LMG P-21439 |
| 84 | 5691977 | 5692111 | + | NZ_CP011803.1 | Clostridium carboxidivorans P7 |
| 85 | 1781332 | 1781490 | + | NZ_CP017962.1 | Virgibacillus halodenitrificans |
| 86 | 1000913 | 1001047 | + | NZ_CP020953.1 | Clostridium drakei |
| 87 | 1546851 | 1546982 | - | NZ_CP027286.1 | Clostridium chauvoei |
| 88 | 3008594 | 3008725 | - | NC_022571.1 | Clostridium saccharobutylicum DSM 13864 |
| 89 | 2085508 | 2085663 | + | NZ_CP022437.1 | Virgibacillus necropolis |
| 90 | 2576500 | 2576634 | - | NZ_CP014176.1 | Clostridium argentinense |
| 91 | 1855957 | 1856088 | + | NZ_CP043998.1 | Clostridium diolis |
| 92 | 2980837 | 2980968 | + | NC_020291.1 | Clostridium saccharoperbutylacetonicum N1-4(HMT) |
| 93 | 2175323 | 2175451 | - | NC_015687.1 | Clostridium acetobutylicum DSM 1731 |
| 94 | 2293658 | 2293789 | - | NZ_CP030775.1 | Clostridium butyricum |
| 95 | 2009986 | 2010141 | + | NZ_CP020772.1 | Halobacillus mangrovi |
| 96 | 2979779 | 2979934 | + | NZ_CP022315.1 | Virgibacillus phasianinus |
| 97 | 3161957 | 3162088 | + | NZ_CP071376.1 | Clostridium gasigenes |
| 98 | 1319618 | 1319752 | - | NZ_LT906477.1 | Clostridium cochlearium |
| 99 | 2970615 | 2970749 | - | NZ_CP015756.1 | Clostridium estertheticum subsp. estertheticum |
| 100 | 2073909 | 2074046 | - | NZ_CP011663.1 | Clostridium sporogenes |
| 101 | 3468663 | 3468797 | + | NZ_CP012395.1 | Clostridium autoethanogenum DSM 10061 |
| 102 | 1223289 | 1223423 | + | NC_014328.1 | Clostridium ljungdahlii DSM 13528 |
| 103 | 2003171 | 2003308 | - | NZ_CP028842.1 | Clostridium botulinum |
| 104 | 2657922 | 2658077 | - | NZ_CP015378.1 | Fictibacillus phosphorivorans |
| 105 | 1226478 | 1226633 | + | NC_018704.1 | Amphibacillus xylanus NBRC 15112 |
| 106 | 3274730 | 3274861 | + | NZ_CP023671.1 | Clostridium septicum |
| 107 | 1852594 | 1852728 | - | NZ_CP032416.1 | Clostridium fermenticellae |
| 108 | 2054576 | 2054707 | + | NZ_CP013019.1 | Clostridium pasteurianum |
| 109 | 1276188 | 1276322 | + | NC_011837.1 | Clostridium kluyveri NBRC 12016 |
| 110 | 1935589 | 1935723 | - | NZ_CP014170.1 | Clostridium tyrobutyricum |
| 111 | 1911904 | 1912059 | + | NC_014829.1 | Evansella cellulosilytica DSM 2522 |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP045295.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF08769.13 | 0.99 | 110 | 272.0 | same-strand | Sporulation initiation factor Spo0A C terminal |
| 2 | PF00072.26 | 0.98 | 109 | 271 | same-strand | Response regulator receiver domain |
| 3 | PF02463.21 | 0.94 | 104 | 1291 | same-strand | RecF/RecN/SMC N terminal domain |
| 4 | PF13476.8 | 0.81 | 90 | 1300.5 | same-strand | AAA domain |
| 5 | PF01316.23 | 0.96 | 107 | 3054.0 | same-strand | Arginine repressor, DNA binding domain |
| 6 | PF02863.20 | 0.96 | 107 | 3054.0 | same-strand | Arginine repressor, C-terminal domain |
| 7 | PF01728.21 | 0.89 | 99 | 4091 | same-strand | FtsJ-like methyltransferase |
| 8 | PF01479.27 | 0.86 | 95 | 4091 | same-strand | S4 domain |
| 9 | PF13292.8 | 0.77 | 85 | 4989 | same-strand | 1-deoxy-D-xylulose-5-phosphate synthase |
| 10 | PF02779.26 | 0.77 | 85 | 4914 | same-strand | Transketolase, pyrimidine binding domain |
| 11 | PF02780.22 | 0.77 | 85 | 4914 | same-strand | Transketolase, C-terminal domain |
++ More..