* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LR027880.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF13614.8
|
0.67
|
4
|
5237.0
|
same-strand
|
AAA domain
|
2
|
PF01656.25
|
0.67
|
4
|
5237.0
|
same-strand
|
CobQ/CobB/MinD/ParA nucleotide binding domain
|
3
|
PF10609.11
|
0.67
|
4
|
5237.0
|
same-strand
|
NUBPL iron-transfer P-loop NTPase
|
4
|
PF02195.20
|
0.67
|
4
|
4336.0
|
same-strand
|
ParB-like nuclease domain
|
5
|
PF17802.3
|
0.67
|
4
|
4.0
|
same-strand
|
Prealbumin-like fold domain
|
6
|
PF08341.13
|
0.67
|
4
|
4.0
|
same-strand
|
Thioester domain
|
7
|
PF13620.8
|
0.67
|
4
|
4.0
|
same-strand
|
Carboxypeptidase regulatory-like domain
|
++ More..