Result : B9LJ33
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Nucleoid-associated protein Chy400_0558 |
| NCBI Accession ID | CP001364.1 |
| Organism | Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) |
| Left | 664734 |
| Right | 665036 |
| Strand | - |
| Nucleotide Sequence | ATGAATCAGCGTCAGCTCATGCAAATGGCTCAACAGATGCAACGCCAGATGCAGAAGGTGCAGGAAGAACTGGCTGCCACCATTGTCGAAGGTACGGCTGGTGGTGGTGCGATCACGGTCAAAATGAACGGTCATCGCGAAGTGCAATCGATCACGATTTCGCCAGAGGTTGTCGATCCTGATGATGTTGAGATGTTGCAGGATCTGTTGTTAGTTGCGATCAATGACGCCTCGCGCAAAGCGCAGCAGTTGGCCGAAGAGCGTATGCAGCCGTTGACTGGTGGTCTCAAGGGGTTGTTCTAA |
| Sequence | MNQRQLMQMAQQMQRQMQKVQEELAATIVEGTAGGGAITVKMNGHREVQSITISPEVVDPDDVEMLQDLLLVAINDASRKAQQLAEERMQPLTGGLKGLF |
| Source of smORF | Swiss-Prot |
| Function | Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. {ECO:0000255|HAMAP-Rule:MF_00274}. |
| Pubmed ID | |
| Domain | CDD:412410 |
| Functional Category | DNA-binding |
| Uniprot ID | B9LJ33 |
| ORF Length (Amino Acid) | 100 |
++ More..
| Conservation Analysis |
No. of Species: 221
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3885287 | 3885589 | + | NC_011831.1 | Chloroflexus aggregans DSM 9485 |
| 2 | 2958458 | 2958760 | - | NC_009767.1 | Roseiflexus castenholzii DSM 13941 |
| 3 | 459980 | 460240 | + | NZ_CP048209.1 | Paenibacillus lycopersici |
| 4 | 3340137 | 3340397 | - | NZ_CP048286.1 | Paenibacillus rhizovicinus |
| 5 | 1755888 | 1756148 | + | NC_016641.1 | Paenibacillus terrae HPL-003 |
| 6 | 1093504 | 1093764 | + | NZ_CP034437.1 | Paenibacillus albus |
| 7 | 2464018 | 2464278 | + | NZ_CP045298.1 | Paenibacillus brasilensis |
| 8 | 148511 | 148771 | + | NZ_CP034346.1 | Paenibacillus lutimineralis |
| 9 | 5476780 | 5477040 | - | NZ_CP020028.1 | Paenibacillus kribbensis |
| 10 | 3753056 | 3753316 | - | NC_019897.1 | Thermobacillus composti KWC4 |
| 11 | 182107 | 182367 | + | NZ_CP009286.1 | Paenibacillus stellifer |
| 12 | 5212000 | 5212257 | - | NZ_CP045293.1 | Paenibacillus guangzhouensis |
| 13 | 786557 | 786817 | + | NZ_CP013023.1 | Paenibacillus bovis |
| 14 | 4036802 | 4037062 | - | NZ_CP014167.1 | Paenibacillus yonginensis |
| 15 | 4036791 | 4037051 | - | NZ_CP019659.1 | Paenibacillus larvae subsp. larvae |
| 16 | 126847 | 127107 | + | NZ_CP004078.1 | Paenibacillus sabinae T27 |
| 17 | 8487165 | 8487425 | - | NC_017672.3 | Paenibacillus mucilaginosus K02 |
| 18 | 4470792 | 4471052 | + | NZ_CP013652.1 | Paenibacillus naphthalenovorans |
| 19 | 2444036 | 2444287 | + | NZ_CP045875.1 | Heliorestis convoluta |
| 20 | 4423455 | 4423712 | + | NZ_CP033433.1 | Cohnella candidum |
| 21 | 7218397 | 7218654 | - | NZ_CP034235.1 | Paenibacillus psychroresistens |
| 22 | 3642734 | 3642994 | - | NZ_CP045295.1 | Paenibacillus cellulositrophicus |
| 23 | 6505982 | 6506242 | - | NZ_CP026520.1 | Paenibacillus chitinolyticus |
| 24 | 6436457 | 6436717 | - | NZ_CP026520.1 | Paenibacillus chitinolyticus |
| 25 | 3922541 | 3922798 | + | NZ_CP054614.1 | Paenibacillus barcinonensis |
| 26 | 2003461 | 2003721 | + | NZ_CP068595.1 | Paenibacillus sonchi |
| 27 | 578698 | 578955 | + | NZ_AP019400.1 | Cohnella abietis |
| 28 | 871797 | 872057 | - | NZ_CP034248.1 | Paenibacillus lentus |
| 29 | 3055848 | 3056108 | - | NZ_CP016809.1 | Paenibacillus ihbetae |
| 30 | 2438234 | 2438494 | + | NZ_CP011058.1 | Paenibacillus beijingensis |
| 31 | 2045836 | 2046096 | + | NZ_CP048429.1 | Paenibacillus jilunlii |
| 32 | 132640 | 132900 | + | NZ_CP009287.1 | Paenibacillus graminis |
| 33 | 132649 | 132909 | + | NZ_LN831776.1 | Paenibacillus riograndensis SBR5 |
| 34 | 2191624 | 2191884 | + | NZ_CP017705.1 | Brevibacillus laterosporus DSM 25 |
| 35 | 138589 | 138849 | + | NZ_CP009428.1 | Paenibacillus odorifer |
| 36 | 129980 | 130240 | + | NZ_CP009285.1 | Paenibacillus borealis |
| 37 | 3305249 | 3305512 | - | NZ_CP016502.1 | Acetivibrio thermocellus DSM 2360 |
| 38 | 36772 | 37029 | + | NC_014098.1 | Kyrpidia tusciae DSM 2912 |
| 39 | 126159 | 126422 | + | NZ_CP025197.1 | Acetivibrio saccincola |
| 40 | 1364412 | 1364669 | - | NZ_CP011388.1 | Paenibacillus swuensis |
| 41 | 29081 | 29341 | + | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 42 | 2721937 | 2722197 | + | NZ_CP061470.1 | Geobacillus zalihae |
| 43 | 243792 | 244052 | - | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 44 | 2368558 | 2368818 | - | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 45 | 172947 | 173198 | + | NC_015520.1 | Mahella australiensis 50-1 BON |
| 46 | 803879 | 804139 | - | NZ_CP043611.1 | Paenibacillus antarcticus |
| 47 | 781740 | 782048 | + | NC_018024.1 | Acetomicrobium mobile DSM 13181 |
| 48 | 273041 | 273304 | + | NC_011898.1 | Ruminiclostridium cellulolyticum H10 |
| 49 | 3200531 | 3200791 | - | NZ_CP014342.1 | Geobacillus subterraneus |
| 50 | 1701489 | 1701758 | - | NZ_CP034791.1 | Caldicellulosiruptor changbaiensis |
| 51 | 2669445 | 2669702 | + | NZ_CP041217.1 | Saccharibacillus brassicae |
| 52 | 35768 | 36025 | + | NZ_CP024955.1 | Kyrpidia spormannii |
| 53 | 153275 | 153538 | + | NC_016627.1 | Acetivibrio clariflavus DSM 19732 |
| 54 | 2407157 | 2407453 | + | NC_013523.1 | Sphaerobacter thermophilus DSM 20745 |
| 55 | 6294486 | 6294731 | - | NC_020291.1 | Clostridium saccharoperbutylacetonicum N1-4(HMT) |
| 56 | 126664 | 126936 | + | NC_013205.1 | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
| 57 | 150332 | 150646 | + | NC_013939.1 | Deferribacter desulfuricans SSM1 |
| 58 | 134256 | 134516 | + | NZ_CP009288.1 | Paenibacillus durus |
| 59 | 10176 | 10433 | - | NZ_CP022657.1 | Tumebacillus algifaecis |
| 60 | 3044714 | 3044974 | - | NZ_CP035492.1 | Paenibacillus protaetiae |
| 61 | 4417513 | 4417776 | - | NZ_CP061336.1 | Ruminiclostridium herbifermentans |
| 62 | 1505883 | 1506182 | + | NC_013525.1 | Thermobaculum terrenum ATCC BAA-798 |
| 63 | 1754550 | 1754891 | + | NC_009437.1 | Caldicellulosiruptor saccharolyticus DSM 8903 |
| 64 | 35275 | 35583 | + | NC_014378.1 | Acetohalobium arabaticum DSM 5501 |
| 65 | 515346 | 515597 | - | NZ_CP022121.1 | Dehalobacterium formicoaceticum |
| 66 | 21637 | 21888 | + | NZ_CP014150.1 | Paeniclostridium sordellii |
| 67 | 105103 | 105363 | + | NZ_LR134338.1 | Brevibacillus brevis |
| 68 | 7187612 | 7187872 | + | NZ_CP021780.1 | Paenibacillus donghaensis |
| 69 | 1186845 | 1187105 | + | NC_010337.2 | Heliomicrobium modesticaldum Ice1 |
| 70 | 3146363 | 3146611 | - | NZ_CP017253.2 | Clostridium taeniosporum |
| 71 | 2782759 | 2783010 | - | NZ_CP016786.1 | Clostridium isatidis |
| 72 | 132686 | 132946 | + | NC_014614.1 | Acetoanaerobium sticklandii |
| 73 | 103275 | 103526 | + | NC_015589.1 | Desulfotomaculum ruminis DSM 2154 |
| 74 | 41052 | 41306 | + | NC_014220.1 | Syntrophothermus lipocalidus DSM 12680 |
| 75 | 103457 | 103708 | + | NC_018664.1 | Gottschalkia acidurici 9a |
| 76 | 199611 | 199862 | + | NZ_CP019698.1 | Desulfotomaculum ferrireducens |
| 77 | 59625 | 59876 | + | NC_008261.1 | Clostridium perfringens ATCC 13124 |
| 78 | 4035427 | 4035720 | - | NZ_CP019870.1 | Clostridioides difficile |
| 79 | 991982 | 992254 | - | NZ_CP048877.1 | Thermosulfuriphilus ammonigenes |
| 80 | 4909037 | 4909297 | - | NC_009633.1 | Alkaliphilus metalliredigens QYMF |
| 81 | 18024 | 18290 | + | NC_006177.1 | Symbiobacterium thermophilum IAM 14863 |
| 82 | 1600194 | 1600451 | + | NZ_CP021434.1 | Tumebacillus avium |
| 83 | 616155 | 616415 | + | NC_013223.1 | Desulfohalobium retbaense DSM 5692 |
| 84 | 472047 | 472307 | - | NZ_CP026363.1 | Brevibacillus agri |
| 85 | 2441060 | 2441320 | - | NC_015519.1 | Tepidanaerobacter acetatoxydans Re1 |
| 86 | 162104 | 162364 | - | NZ_CP039710.1 | Thermoactinomyces vulgaris |
| 87 | 85454 | 85714 | + | NZ_CP068564.1 | Keratinibaculum paraultunense |
| 88 | 1185822 | 1186082 | + | NC_015275.1 | Cellulosilyticum lentocellum DSM 5427 |
| 89 | 1345762 | 1346013 | + | NZ_CP071376.1 | Clostridium gasigenes |
| 90 | 2436052 | 2436303 | - | NZ_AP021876.1 | Desulfosarcina ovata subsp. sediminis |
| 91 | 7125596 | 7125889 | + | NZ_AP021875.1 | Desulfosarcina widdelii |
| 92 | 54245 | 54496 | + | NC_009253.1 | Desulfotomaculum reducens MI-1 |
| 93 | 2803241 | 2803492 | - | NZ_CP027286.1 | Clostridium chauvoei |
| 94 | 53666 | 53917 | + | NZ_CP009170.1 | Thermoanaerobacter kivui |
| 95 | 1891680 | 1891931 | - | NC_012108.1 | Desulfobacterium autotrophicum HRM2 |
| 96 | 3380804 | 3381073 | - | NZ_AP014924.1 | Limnochorda pilosa |
| 97 | 163007 | 163330 | + | NZ_CP026948.1 | Corynebacterium liangguodongii |
| 98 | 55418 | 55669 | + | NC_014410.1 | Thermoanaerobacterium thermosaccharolyticum DSM 571 |
| 99 | 101612 | 101863 | + | NC_013216.1 | Desulfofarcimen acetoxidans DSM 771 |
| 100 | 2679217 | 2679468 | - | NZ_CP045508.1 | Desulfolutivibrio sulfoxidireducens |
| 101 | 1410980 | 1411231 | - | NZ_CP045504.1 | Desulfovibrio sulfodismutans DSM 3696 |
| 102 | 103604 | 103864 | - | NZ_CP036523.1 | Peptacetobacter hiranonis |
| 103 | 2344563 | 2344814 | + | NZ_CP012395.1 | Clostridium autoethanogenum DSM 10061 |
| 104 | 82118 | 82369 | + | NC_014328.1 | Clostridium ljungdahlii DSM 13528 |
| 105 | 2148687 | 2148947 | - | NC_014377.1 | Thermosediminibacter oceani DSM 16646 |
| 106 | 7140161 | 7140454 | + | NZ_AP021874.1 | Desulfosarcina alkanivorans |
| 107 | 298616 | 298876 | - | NC_008609.1 | Pelobacter propionicus DSM 2379 |
| 108 | 53533 | 53784 | + | NC_021184.1 | Desulfoscipio gibsoniae DSM 7213 |
| 109 | 21766 | 22026 | + | NZ_CP019699.1 | Novibacillus thermophilus |
| 110 | 3885435 | 3885707 | + | NZ_CP039543.1 | Desulfovibrio marinus |
| 111 | 1433053 | 1433367 | + | NC_014758.1 | Calditerrivibrio nitroreducens DSM 19672 |
| 112 | 274869 | 275129 | + | NZ_CP010311.1 | Geoalkalibacter subterraneus |
| 113 | 203364 | 203624 | + | NZ_CP011801.1 | Nitrospira moscoviensis |
| 114 | 2627406 | 2627666 | - | NZ_CP017269.1 | Geosporobacter ferrireducens |
| 115 | 1273396 | 1273668 | - | NZ_CP053564.1 | Pseudonocardia broussonetiae |
| 116 | 1859629 | 1859922 | + | NZ_LT635480.1 | Ndongobacter massiliensis |
| 117 | 341315 | 341578 | + | NC_020134.1 | Thermoclostridium stercorarium subsp. stercorarium DSM 8532 |
| 118 | 108646 | 108906 | + | NC_002939.5 | Geobacter sulfurreducens PCA |
| 119 | 1696435 | 1696740 | + | NZ_CP040098.1 | Desulfoglaeba alkanexedens ALDC |
| 120 | 240276 | 240536 | - | NZ_AP023213.1 | Citrifermentans bremense |
| 121 | 133912 | 134202 | + | NZ_CP009248.1 | Corynebacterium sphenisci DSM 44792 |
| 122 | 248802 | 249062 | - | NC_011146.1 | Citrifermentans bemidjiense Bem |
| 123 | 1492969 | 1493238 | + | NZ_CP009761.1 | Parvimonas micra |
| 124 | 607301 | 607561 | - | NC_009943.1 | Desulfococcus oleovorans Hxd3 |
| 125 | 29294 | 29551 | + | NZ_AP021853.1 | Sporolactobacillus terrae |
| 126 | 2599031 | 2599351 | + | NC_014221.1 | Truepera radiovictrix DSM 17093 |
| 127 | 2245908 | 2246171 | - | NC_017079.1 | Caldilinea aerophila DSM 14535 = NBRC 104270 |
| 128 | 662142 | 662399 | + | NZ_LT632322.1 | Murdochiella vaginalis |
| 129 | 2592357 | 2592617 | + | NC_011768.1 | Desulfatibacillum aliphaticivorans |
| 130 | 589392 | 589652 | + | NZ_CP011150.1 | Bacillus altitudinis |
| 131 | 1517644 | 1517904 | - | NZ_CP043404.1 | Bacillus safensis |
| 132 | 322271 | 322561 | + | NC_020302.1 | Corynebacterium halotolerans YIM 70093 = DSM 44683 |
| 133 | 2641222 | 2641482 | - | NZ_CP026538.1 | Desulfovibrio carbinolicus |
| 134 | 1600699 | 1600959 | - | NZ_CP017786.1 | Bacillus xiamenensis |
| 135 | 3901475 | 3901735 | - | NZ_CP011937.1 | Bacillus velezensis |
| 136 | 5004903 | 5005154 | + | NC_009483.1 | Geobacter uraniireducens Rf4 |
| 137 | 240019 | 240294 | + | NZ_LR738855.1 | Corynebacterium rouxii |
| 138 | 3808546 | 3808797 | - | NC_011837.1 | Clostridium kluyveri NBRC 12016 |
| 139 | 29812 | 30072 | + | NZ_CP053376.1 | Bacillus amyloliquefaciens |
| 140 | 1151943 | 1152233 | + | NZ_CP030777.1 | Faecalibacterium prausnitzii |
| 141 | 1076268 | 1076564 | - | NZ_CP029494.1 | Deinococcus irradiatisoli |
| 142 | 164850 | 165140 | + | NZ_CP026947.1 | Corynebacterium yudongzhengii |
| 143 | 16861 | 17121 | + | NZ_CP015378.1 | Fictibacillus phosphorivorans |
| 144 | 1553355 | 1553615 | + | NZ_CP061800.1 | Desulfonema magnum |
| 145 | 28256 | 28516 | + | NZ_CP048852.1 | Bacillus tequilensis |
| 146 | 3159096 | 3159356 | + | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 147 | 28343 | 28603 | + | NZ_CP051464.1 | Bacillus mojavensis |
| 148 | 32867 | 33127 | + | NC_006270.3 | Bacillus licheniformis DSM 13 = ATCC 14580 |
| 149 | 585736 | 585996 | - | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 150 | 2413897 | 2414217 | - | NZ_LT906473.1 | Corynebacterium cystitidis |
| 151 | 454181 | 454441 | - | NZ_CP070511.1 | Parageobacillus toebii |
| 152 | 160485 | 160745 | - | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 153 | 28200 | 28460 | + | NZ_CP034943.1 | Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 |
| 154 | 13828 | 14088 | + | NZ_CP013984.1 | Bacillus inaquosorum |
| 155 | 28592 | 28852 | + | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 156 | 1061019 | 1061279 | + | NZ_CP017703.1 | Aeribacillus pallidus |
| 157 | 27295 | 27558 | + | NC_011725.1 | Bacillus cereus B4264 |
| 158 | 59458 | 59718 | + | NZ_CP023665.1 | Bacillus paralicheniformis |
| 159 | 2469629 | 2469889 | + | NZ_CP030926.1 | Peribacillus butanolivorans |
| 160 | 2543824 | 2544084 | - | NZ_CP017704.1 | Peribacillus simplex NBRC 15720 = DSM 1321 |
| 161 | 4405822 | 4406085 | + | NZ_CP021850.1 | Pseudoclostridium thermosuccinogenes |
| 162 | 1980817 | 1981077 | - | NZ_CP029364.1 | Bacillus halotolerans |
| 163 | 5092377 | 5092640 | - | NZ_CP040336.1 | Bacillus luti |
| 164 | 27289 | 27552 | + | NC_007530.2 | Bacillus anthracis str. 'Ames Ancestor' |
| 165 | 4161794 | 4162054 | - | NZ_CP016020.1 | Bacillus weihaiensis |
| 166 | 5974963 | 5975217 | - | NZ_CP061799.1 | Desulfonema limicola |
| 167 | 2048621 | 2048911 | - | NZ_CP031500.1 | Deinococcus radiodurans |
| 168 | 26889 | 27152 | + | NZ_CP032365.1 | Bacillus wiedmannii |
| 169 | 32734 | 32994 | + | NZ_LT603683.1 | Bacillus glycinifermentans |
| 170 | 4626105 | 4626365 | + | NZ_CP018866.1 | Sutcliffiella cohnii |
| 171 | 4182441 | 4182692 | - | NZ_CP009687.1 | Clostridium aceticum |
| 172 | 164378 | 164638 | + | NZ_CP033052.1 | Bacillus vallismortis |
| 173 | 221158 | 221418 | + | NZ_CP035130.1 | Gudongella oleilytica |
| 174 | 26644 | 26904 | + | NZ_CP012152.1 | Anoxybacillus gonensis |
| 175 | 5063653 | 5063913 | - | NZ_AP019308.1 | Paenibacillus baekrokdamisoli |
| 176 | 108974 | 109219 | + | NZ_CP030775.1 | Clostridium butyricum |
| 177 | 27422 | 27685 | + | NZ_CP024109.1 | Bacillus cytotoxicus |
| 178 | 1605951 | 1606241 | + | NC_008025.1 | Deinococcus geothermalis DSM 11300 |
| 179 | 26893 | 27156 | + | NZ_CP064875.1 | Bacillus toyonensis |
| 180 | 733766 | 734026 | + | NC_019902.2 | Thioalkalivibrio nitratireducens DSM 14787 |
| 181 | 28434 | 28694 | + | NZ_CP042593.1 | Bacillus dafuensis |
| 182 | 29247 | 29507 | + | NZ_CP012024.1 | Bacillus smithii |
| 183 | 2209583 | 2209873 | + | NC_017790.1 | Deinococcus gobiensis I-0 |
| 184 | 4523145 | 4523408 | - | NZ_LT906483.1 | Mycolicibacterium thermoresistibile |
| 185 | 27183 | 27437 | + | NZ_CP016540.2 | Planococcus versutus |
| 186 | 1732614 | 1732874 | - | NZ_CP013661.2 | Planococcus kocurii |
| 187 | 29999 | 30259 | + | NZ_CP019401.1 | Planococcus faecalis |
| 188 | 4276109 | 4276408 | + | NZ_CP033972.1 | Gordonia insulae |
| 189 | 268917 | 269201 | + | NZ_CP006764.1 | Corynebacterium doosanense CAU 212 = DSM 45436 |
| 190 | 49516 | 49770 | + | NZ_CP016543.2 | Planococcus donghaensis |
| 191 | 29038 | 29292 | + | NZ_CP016537.2 | Planococcus halocryophilus |
| 192 | 3102146 | 3102454 | + | NZ_CP016379.1 | Anoxybacter fermentans |
| 193 | 140723 | 140983 | + | NZ_CP053989.1 | Niallia circulans |
| 194 | 27462 | 27722 | + | NZ_CP016539.2 | Planococcus plakortidis |
| 195 | 27706 | 27966 | + | NZ_CP059540.1 | Planococcus maritimus |
| 196 | 3215704 | 3215964 | + | NZ_CP013659.2 | Planococcus rifietoensis |
| 197 | 3270152 | 3270472 | - | NZ_CP046908.1 | Stappia indica |
| 198 | 6694395 | 6694703 | - | NZ_CP041695.1 | Nocardia otitidiscaviarum |
| 199 | 27803 | 28063 | + | NZ_CP016538.2 | Planococcus maritimus |
| 200 | 143487 | 143777 | + | NZ_CP010028.1 | Deinococcus radiopugnans |
| 201 | 31375 | 31635 | + | NC_022524.1 | Bacillus infantis NRRL B-14911 |
| 202 | 1865342 | 1865602 | - | NZ_CP041305.1 | Cytobacillus ciccensis |
| 203 | 943339 | 943629 | - | NZ_CP013910.1 | Deinococcus actinosclerus |
| 204 | 5780477 | 5780725 | - | NZ_CP043998.1 | Clostridium diolis |
| 205 | 42415 | 42666 | + | NC_019978.1 | Halobacteroides halobius DSM 5150 |
| 206 | 55857 | 56108 | + | NC_015555.1 | Thermoanaerobacterium xylanolyticum LX-11 |
| 207 | 2594126 | 2594377 | - | NZ_CP047602.1 | Thermoanaerobacterium aotearoense |
| 208 | 8011771 | 8012040 | - | NZ_CP023865.1 | Actinoplanes teichomyceticus ATCC 31121 |
| 209 | 3838624 | 3838884 | - | NC_007517.1 | Geobacter metallireducens GS-15 |
| 210 | 29916 | 30176 | + | NZ_CP016534.2 | Planococcus antarcticus DSM 14505 |
| 211 | 3352077 | 3352355 | - | NZ_AP022871.1 | Phytohabitans suffuscus |
| 212 | 3015915 | 3016175 | - | NC_016894.1 | Acetobacterium woodii DSM 1030 |
| 213 | 29752 | 30012 | + | NZ_CP023704.1 | Caldibacillus thermoamylovorans |
| 214 | 242197 | 242493 | + | NC_019673.1 | Saccharothrix espanaensis DSM 44229 |
| 215 | 36881 | 37141 | + | NC_014829.1 | Evansella cellulosilytica DSM 2522 |
| 216 | 398191 | 398499 | + | NC_014654.1 | Halanaerobium hydrogeniformans |
| 217 | 7334981 | 7335259 | - | NZ_AP022870.1 | Phytohabitans flavus |
| 218 | 384848 | 385117 | + | NZ_LS483459.1 | Corynebacterium jeikeium |
| 219 | 184041 | 184292 | - | NZ_AP019004.1 | Phascolarctobacterium faecium |
| 220 | 1371440 | 1371709 | - | NZ_CP026746.1 | Nocardia cyriacigeorgica |
| 221 | 1472540 | 1472821 | + | NZ_CP059694.1 | Gordonia rubripertincta |
| 222 | 634429 | 634710 | - | NZ_CP027114.1 | Gordonia alkanivorans |
| 223 | 141074 | 141343 | + | NZ_CP011546.1 | Corynebacterium uterequi |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_011831.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF13177.8 | 0.92 | 203 | 91.0 | same-strand | DNA polymerase III, delta subunit |
| 2 | PF00004.31 | 0.92 | 203 | 91 | same-strand | ATPase family associated with various cellular activities (AAA) |
| 3 | PF12169.10 | 0.9 | 199 | 91 | same-strand | DNA polymerase III subunits gamma and tau domain III |
| 4 | PF13662.8 | 0.98 | 216 | 20 | same-strand | Toprim domain |
| 5 | PF02132.17 | 0.99 | 219 | 20 | same-strand | RecR protein |
| 6 | PF01751.24 | 0.93 | 205 | 20 | same-strand | Toprim domain |
++ More..