Protein Information |
Information Type | Description |
---|---|
Protein name | EXP03382 |
NCBI Accession ID | |
Organism | Ruminococcus |
Left | |
Right | |
Strand | |
Nucleotide Sequence | ATGAGTATTGTTGATTTTATAGCAGTAGTGAGCTTCGGCTTAACCTGCTTTGGTCTTGGATATACCTTTGGCAAGGATAATACTAAATTAACTGTGGCATACCATTGA |
Sequence | MSIVDFIAVVSFGLTCFGLGYTFGKDNTKLTVAYH |
Source of smORF | Metagenomic Ribo-seq |
Function | |
Pubmed ID | 32601270 |
Domain | |
Functional Category | Function not yet assigned |
Uniprot ID | |
ORF Length (Amino Acid) | 35 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 1515906 | 1516004 | + | NZ_CP070062.1 | Coprococcus comes |
2 | 1532483 | 1532581 | + | NZ_CP070062.1 | Coprococcus comes |
3 | 1951413 | 1951511 | + | NZ_CP070062.1 | Coprococcus comes |
4 | 1463304 | 1463402 | - | NZ_CP036170.1 | [Clostridium] scindens ATCC 35704 |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF09413.12 | 1.0 | 2 | 114 | opposite-strand | Putative prokaryotic signal transducing protein |