ProsmORF-pred
Result : B8J1U2
Protein Information
Information Type Description
Protein name 30S ribosomal protein S16
NCBI Accession ID CP001358.1
Organism Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949 / MB)
Left 2176871
Right 2177110
Strand -
Nucleotide Sequence ATGGCTGTAAAGTTGAAATTGACCCGCCTCGGCAGCAAAAAGCACCCCTTCTACCGGGTGGTGGCCGCCACTGACGAAACCCGTCGTGATGGCCGTCCGCTGGAGTTTCTGGGCTACTATAATCCCATGACTGATCCGGTTGAAGTCAAGCTCGATGCGGACAAAATCAAGGAATGGCTGGCCCGTGGCGCAGAACCCACGGACACCGTCCGCGCCCTGATTAAAAAACACATGGCCTAG
Sequence MAVKLKLTRLGSKKHPFYRVVAATDETRRDGRPLEFLGYYNPMTDPVEVKLDADKIKEWLARGAEPTDTVRALIKKHMA
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl00368. Profile Description: Ribosomal protein S16. This model describes ribosomal S16 of bacteria and organelles. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Pubmed ID
Domain CDD:412339
Functional Category Ribosomal_protein
Uniprot ID B8J1U2
ORF Length (Amino Acid) 79
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 416
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 2319655 2319894 - NZ_CP014229.1 Desulfovibrio fairfieldensis
2 1057781 1058020 + NZ_CP026538.1 Desulfovibrio carbinolicus
3 931685 931924 - NC_017310.1 Desulfovibrio vulgaris RCH1
4 3904966 3905205 - NC_012796.1 Desulfovibrio magneticus RS-1
5 211932 212168 + NC_012881.1 Maridesulfovibrio salexigens DSM 2638
6 1127275 1127514 - NC_007519.1 Desulfovibrio alaskensis G20
7 2619331 2619570 + NZ_LT907975.1 Pseudodesulfovibrio profundus
8 3741561 3741806 + NC_013173.1 Desulfomicrobium baculatum DSM 4028
9 2287928 2288173 - NZ_AP017378.1 Desulfovibrio ferrophilus
10 1794264 1794503 + NZ_CP046400.1 Pseudodesulfovibrio cashew
11 4043633 4043872 - NZ_CP045504.1 Desulfovibrio sulfodismutans DSM 3696
12 2208415 2208660 - NZ_CP039543.1 Desulfovibrio marinus
13 565975 566214 - NC_016629.1 Desulfocurvibacter africanus subsp. africanus str. Walvis Bay
14 705479 705727 - NC_020127.1 Lawsonia intracellularis N343
15 842152 842391 + NC_014844.1 Pseudodesulfovibrio aespoeensis Aspo-2
16 3000715 3000954 + NC_016803.1 Pseudodesulfovibrio mercurii
17 2322839 2323084 - NC_013223.1 Desulfohalobium retbaense DSM 5692
18 1425512 1425757 + NZ_CP014230.1 Desulfomicrobium orale DSM 12838
19 3136205 3136444 - NZ_CP045508.1 Desulfolutivibrio sulfoxidireducens
20 1884625 1884894 - NZ_CP048877.1 Thermosulfuriphilus ammonigenes
21 1879313 1879555 - NZ_CP025197.1 Acetivibrio saccincola
22 6455008 6455262 + NZ_AP021874.1 Desulfosarcina alkanivorans
23 1945422 1945667 + NZ_CP021850.1 Pseudoclostridium thermosuccinogenes
24 2012114 2012386 + NC_017668.1 Halobacillus halophilus DSM 2266
25 749736 750008 + NZ_CP059276.1 Lactobacillus taiwanensis
26 768985 769257 + NC_008530.1 Lactobacillus gasseri ATCC 33323 = JCM 1131
27 762766 763038 + NZ_AP018549.1 Lactobacillus paragasseri
28 4299739 4299984 + NZ_CP029487.1 Eubacterium maltosivorans
29 1562587 1562859 - NC_018704.1 Amphibacillus xylanus NBRC 15112
30 1713057 1713302 + NZ_CP016502.1 Acetivibrio thermocellus DSM 2360
31 257403 257681 - NC_013939.1 Deferribacter desulfuricans SSM1
32 2527247 2527495 - NZ_CP028842.1 Clostridium botulinum
33 652778 653050 - NZ_CP012034.1 Companilactobacillus ginsenosidimutans
34 1385412 1385672 - NC_014216.1 Desulfurivibrio alkaliphilus AHT 2
35 3727529 3727774 + NC_020304.1 Desulfocapsa sulfexigens DSM 10523
36 3907137 3907415 - NZ_CP018622.1 Virgibacillus dokdonensis
37 1492753 1493025 - NZ_AP024085.1 Faecalibacillus intestinalis
38 815261 815476 + NZ_AP014945.1 Caldimicrobium thiodismutans
39 2211647 2211892 - NZ_CP013019.1 Clostridium pasteurianum
40 2789733 2789981 - NZ_CP011663.1 Clostridium sporogenes
41 1691693 1691965 + NZ_CP029797.1 Paraliobacillus zengyii
42 2761507 2761752 - NC_009633.1 Alkaliphilus metalliredigens QYMF
43 2673388 2673633 - NC_014624.2 Eubacterium callanderi
44 3103001 3103246 + NZ_CP019962.1 Eubacterium limosum
45 387623 387889 - NZ_CP042909.1 Thermosulfurimonas marina
46 1218070 1218342 + NZ_CP039710.1 Thermoactinomyces vulgaris
47 822000 822245 + NC_011898.1 Ruminiclostridium cellulolyticum H10
48 3702069 3702329 + NC_008554.1 Syntrophobacter fumaroxidans MPOB
49 3746821 3747081 + NC_008554.1 Syntrophobacter fumaroxidans MPOB
50 1353513 1353785 - NZ_CP049366.1 Companilactobacillus pabuli
51 1120320 1120592 + NZ_CP017702.1 Companilactobacillus farciminis KCTC 3681 = DSM 20184
52 2165528 2165800 - NZ_CP048103.1 Kroppenstedtia eburnea
53 6750510 6750764 + NZ_AP021875.1 Desulfosarcina widdelii
54 2826218 2826475 - NZ_AP021876.1 Desulfosarcina ovata subsp. sediminis
55 851024 851266 + NZ_CP030777.1 Faecalibacterium prausnitzii
56 956778 957050 - NZ_CP029476.1 Lactobacillus apis
57 1693559 1693834 - NZ_CP017713.1 Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001
58 1173718 1173990 - NZ_AP019750.1 Lactobacillus delbrueckii subsp. delbrueckii
59 1376469 1376741 - NZ_CP034234.1 Erysipelothrix piscisicarius
60 1311502 1311774 + NZ_LR134439.1 Erysipelothrix rhusiopathiae
61 1022091 1022363 + NZ_CP040736.1 Companilactobacillus futsaii
62 705556 705813 + NC_015682.1 Thermodesulfobacterium geofontis OPF15
63 2388257 2388529 + NZ_LR134338.1 Brevibacillus brevis
64 2093043 2093312 - NZ_CP017962.1 Virgibacillus halodenitrificans
65 1577681 1577953 + NC_004193.1 Oceanobacillus iheyensis HTE831
66 302035 302304 - NZ_CP017269.1 Geosporobacter ferrireducens
67 579989 580234 - NZ_CP027226.1 Fastidiosipila sanguinis
68 2496563 2496808 - NC_016894.1 Acetobacterium woodii DSM 1030
69 1195850 1196122 - NZ_CP029477.1 Lactobacillus kullabergensis
70 1137960 1138232 - NZ_CP024610.1 Lactobacillus terrae
71 860978 861223 + NC_014657.1 Caldicellulosiruptor owensensis OL
72 459992 460234 + NC_014833.1 Ruminococcus albus 7 = DSM 20455
73 1688663 1688908 - NZ_CP014204.2 Clostridium baratii
74 1416853 1417101 - NC_013385.1 Ammonifex degensii KC4
75 1309769 1310029 - NZ_CP009170.1 Thermoanaerobacter kivui
76 1266462 1266734 - NC_021181.2 Lactobacillus acidophilus La-14
77 888162 888434 + NZ_CP059829.1 Lactobacillus ultunensis
78 1794595 1794867 + NZ_CP024848.1 Oceanobacillus zhaokaii
79 2421074 2421343 - NZ_CP020772.1 Halobacillus mangrovi
80 1755054 1755326 + NZ_CP019323.1 Companilactobacillus allii
81 1554659 1554886 + NZ_CP041666.1 Radiobacillus deserti
82 1032191 1032466 - NZ_CP041364.1 Schleiferilactobacillus harbinensis
83 551878 552147 + NZ_CP016379.1 Anoxybacter fermentans
84 1108392 1108664 - NZ_CP029544.1 Lactobacillus helsingborgensis
85 1303560 1303820 - NC_014209.1 Thermoanaerobacter mathranii subsp. mathranii str. A3
86 1307740 1308000 - NC_014964.1 Thermoanaerobacter brockii subsp. finnii Ako-1
87 1281762 1282022 - NC_013921.1 Thermoanaerobacter italicus Ab9
88 1419265 1419525 - NC_015958.1 Thermoanaerobacter wiegelii Rt8.B1
89 1068508 1068786 - NZ_CP045530.1 Limosilactobacillus pontis
90 822070 822324 - NZ_CP009761.1 Parvimonas micra
91 839248 839523 + NZ_CP017267.1 Vagococcus teuberi
92 879089 879361 + NZ_CP017996.1 Companilactobacillus crustorum
93 2599641 2599913 + NZ_CP026363.1 Brevibacillus agri
94 370811 371077 + NZ_CP013862.1 Lentibacillus amyloliquefaciens
95 1200262 1200507 + NZ_CP017253.2 Clostridium taeniosporum
96 765128 765400 + NZ_CP018809.1 Lactobacillus jensenii
97 911691 911963 + NZ_CP017237.1 Moorella thermoacetica
98 1472664 1472921 - NC_014410.1 Thermoanaerobacterium thermosaccharolyticum DSM 571
99 81771 82007 - NZ_CP008796.1 Thermodesulfobacterium commune DSM 2178
100 3932203 3932457 + NC_018645.1 Desulfobacula toluolica Tol2
101 1717648 1717920 - NZ_CP016843.1 Carnobacterium divergens
102 1130747 1131022 - NZ_CP045240.1 Limosilactobacillus vaginalis
103 1090720 1090965 + NC_015520.1 Mahella australiensis 50-1 BON
104 1573841 1574086 + NC_022571.1 Clostridium saccharobutylicum DSM 13864
105 1653022 1653267 - NC_014392.1 Caldicellulosiruptor obsidiansis OB47
106 1449802 1450047 - NC_015949.1 Caldicellulosiruptor lactoaceticus 6A
107 1786397 1786642 - NC_014652.1 Caldicellulosiruptor hydrothermalis 108
108 1022838 1023083 + NC_014721.1 Caldicellulosiruptor kristjanssonii I77R1B
109 1120943 1121188 + NZ_CP034791.1 Caldicellulosiruptor changbaiensis
110 1072990 1073235 + NC_012034.1 Caldicellulosiruptor bescii DSM 6725
111 1425243 1425515 + NZ_CP019699.1 Novibacillus thermophilus
112 774850 775092 - NZ_HF545616.1 Ruminococcus bicirculans
113 1161445 1161690 + NZ_CP030775.1 Clostridium butyricum
114 1872404 1872649 - NC_014720.1 Caldicellulosiruptor kronotskyensis 2002
115 2591492 2591764 + NZ_CP037940.1 Weissella cryptocerci
116 1406070 1406327 - NC_015555.1 Thermoanaerobacterium xylanolyticum LX-11
117 582862 583134 + NZ_CP019728.1 Jeotgalibaca dankookensis
118 918062 918337 + NC_020207.1 Enterococcus faecium ATCC 8459 = NRRL B-2354
119 994348 994623 + NZ_CP065211.1 Enterococcus lactis
120 1954439 1954714 - NZ_CP018061.1 Enterococcus mundtii
121 1050187 1050459 - NZ_CP015444.1 Lactobacillus helveticus
122 845584 845856 + NZ_CP061341.1 Lactobacillus kefiranofaciens
123 1040747 1041019 - NZ_CP017326.1 Weissella soli
124 2129679 2129924 - NZ_CP009687.1 Clostridium aceticum
125 1020204 1020479 - NZ_CP044534.1 Limosilactobacillus frumenti
126 1503422 1503694 - NZ_CP012559.1 Companilactobacillus heilongjiangensis
127 1482970 1483227 - NZ_CP047602.1 Thermoanaerobacterium aotearoense
128 1573969 1574214 + NC_009922.1 Alkaliphilus oremlandii OhILAs
129 1180748 1181017 + NZ_CP035130.1 Gudongella oleilytica
130 751520 751795 + NZ_CP023074.1 Enterococcus thailandicus
131 2218014 2218256 - NZ_CP025286.1 Ethanoligenens harbinense YUAN-3
132 2486740 2487012 + NZ_CP034465.1 Jeotgalibaca ciconiae
133 3683369 3683608 - NZ_CP071376.1 Clostridium gasigenes
134 2476360 2476635 - NC_020995.1 Enterococcus casseliflavus EC20
135 1221728 1221946 - NZ_CP027228.1 Mogibacterium diversum
136 1887996 1888241 - NZ_HG917868.1 Clostridium bornimense
137 2747011 2747268 - NC_014972.1 Desulfobulbus propionicus DSM 2032
138 1794948 1795220 - NZ_AP022822.1 Enterococcus saigonensis
139 1597923 1598198 - NZ_LS483306.1 Enterococcus cecorum
140 1243999 1244274 - NZ_CP045605.1 Limosilactobacillus reuteri
141 985556 985828 + NZ_CP013213.1 Erysipelothrix larvae
142 2343322 2343588 - NC_015172.1 Syntrophobotulus glycolicus DSM 8271
143 552828 553103 + NZ_CP021874.1 Enterococcus wangshanyuanii
144 3088140 3088391 - NZ_CP054140.1 Desulfobulbus oligotrophicus
145 1040571 1040843 + NZ_CP014159.1 Aerococcus christensenii
146 1825607 1825879 - NC_013891.1 Listeria seeligeri serovar 1/2b str. SLCC3954
147 1841454 1841726 - NZ_LT906444.1 Listeria welshimeri
148 1922044 1922316 - NZ_CP009577.1 Listeria ivanovii subsp. ivanovii
149 1867427 1867699 - NC_003210.1 Listeria monocytogenes EGD-e
150 1305413 1305658 + NC_015681.1 Thermodesulfatator indicus DSM 15286
151 1276590 1276862 + NZ_CP008876.1 Terribacillus goriensis
152 580285 580530 + NC_013895.2 Mageeibacillus indolicus UPII9-5
153 139482 139754 + NZ_CP009709.1 Weizmannia coagulans DSM 1 = ATCC 7050
154 1576561 1576836 + NZ_CP023011.2 Enterococcus hirae
155 2379027 2379272 - NZ_CP020559.1 Clostridium formicaceticum
156 543866 544138 + NZ_CP031835.1 Lactobacillus amylolyticus
157 3391499 3391759 - NZ_CP016757.1 Cloacibacillus porcorum
158 1984683 1984955 + NZ_CP049740.1 Jeotgalibaca arthritidis
159 378312 378584 - NZ_CP049889.1 Jeotgalibaca porci
160 3160334 3160579 + NC_006138.1 Desulfotalea psychrophila LSv54
161 1396390 1396635 + NZ_CP043998.1 Clostridium diolis
162 1447466 1447711 + NC_020291.1 Clostridium saccharoperbutylacetonicum N1-4(HMT)
163 3011824 3012084 + NZ_CP040098.1 Desulfoglaeba alkanexedens ALDC
164 1708224 1708496 + NZ_AP017312.1 Aneurinibacillus soli
165 1954699 1954971 - NZ_CP048104.1 Kroppenstedtia pulmonis
166 1659203 1659475 + NZ_CP015378.1 Fictibacillus phosphorivorans
167 2546670 2546915 - NZ_CP061336.1 Ruminiclostridium herbifermentans
168 617968 618240 + NZ_CP064060.1 Anoxybacillus caldiproteolyticus
169 1278522 1278767 + NZ_CP027286.1 Clostridium chauvoei
170 508958 509230 + NZ_CP014161.1 Aerococcus urinae
171 1602146 1602421 - NC_015437.1 Selenomonas sputigena ATCC 35185
172 1140678 1140923 + NZ_LR134379.1 Slackia heliotrinireducens
173 1802527 1802799 + NZ_CP016622.1 Parageobacillus thermoglucosidasius
174 1270074 1270346 - NZ_CP046314.1 Gemella morbillorum
175 932232 932504 + NZ_LR134484.1 Gemella haemolysans
176 2084337 2084597 + NC_014758.1 Calditerrivibrio nitroreducens DSM 19672
177 388211 388483 + NZ_CP023501.1 Weissella paramesenteroides
178 1439280 1439552 - NZ_CP014332.1 Weissella jogaejeotgali
179 1039945 1040217 + NZ_CP012152.1 Anoxybacillus gonensis
180 3397907 3398179 - NZ_CP017703.1 Aeribacillus pallidus
181 1951167 1951439 + NZ_CP045875.1 Heliorestis convoluta
182 1145135 1145392 - NC_008609.1 Pelobacter propionicus DSM 2379
183 2569073 2569345 - NZ_CP022437.1 Virgibacillus necropolis
184 1789139 1789411 - NZ_CP038012.1 Sporosarcina pasteurii
185 2540574 2540846 - NZ_CP017560.1 Sporosarcina ureilytica
186 2573678 2573911 + NZ_CP061800.1 Desulfonema magnum
187 188016 188261 - NZ_CP023671.1 Clostridium septicum
188 3194865 3195101 - NZ_CP034413.2 Dysosmobacter welbionis
189 2616805 2617071 + NZ_CP035108.1 Geovibrio thiophilus
190 2789376 2789648 - NZ_CP070511.1 Parageobacillus toebii
191 1905146 1905367 + NC_015687.1 Clostridium acetobutylicum DSM 1731
192 1117729 1117986 - NZ_CP068564.1 Keratinibaculum paraultunense
193 2221058 2221273 - NZ_CP048436.1 Flavonifractor plautii
194 2905812 2906054 - NZ_CP015756.1 Clostridium estertheticum subsp. estertheticum
195 2140720 2140968 - NZ_CP014223.1 Anaerotignum propionicum DSM 1682
196 2075809 2076054 + NZ_CP053187.1 Turicibacter sanguinis
197 2158819 2159091 - NZ_CP060715.1 Erysipelothrix inopinata
198 821612 821851 - NZ_CP029256.1 Christensenella minuta
199 1226861 1227136 - NZ_CP045007.1 Latilactobacillus graminis
200 246831 247106 + NZ_CP026116.1 Latilactobacillus curvatus JCM 1096 = DSM 20019
201 1523766 1524041 + NZ_CP046037.1 Latilactobacillus sakei
202 747028 747300 + NZ_CP027563.1 Weissella confusa
203 1166788 1167033 - NZ_CP016786.1 Clostridium isatidis
204 2573814 2574086 - NZ_CP065425.1 Heyndrickxia vini
205 1580971 1581243 + NZ_CP011102.1 Listeria weihenstephanensis
206 1050783 1051055 + NZ_CP006837.1 Lysinibacillus varians
207 3619485 3619757 - NZ_CP019980.1 Lysinibacillus sphaericus
208 3094678 3094920 - NZ_CP014176.1 Clostridium argentinense
209 1444268 1444540 - NZ_CP011361.2 Salimicrobium jeotgali
210 1055240 1055497 + NZ_LT906477.1 Clostridium cochlearium
211 1302378 1302623 + NC_020134.1 Thermoclostridium stercorarium subsp. stercorarium DSM 8532
212 3743988 3744260 - NZ_CP010820.1 Lysinibacillus fusiformis
213 58508 58741 + NZ_LR130778.1 Petrocella atlantisensis
214 2289809 2290054 + NC_014393.1 Clostridium cellulovorans 743B
215 1844244 1844501 + NZ_CP040924.1 Clostridium thermarum
216 2600807 2601079 - NC_002570.2 Alkalihalobacillus halodurans C-125
217 1193246 1193503 + NZ_CP032416.1 Clostridium fermenticellae
218 1487224 1487469 - NZ_LR590481.1 Hathewaya histolytica
219 2200584 2200856 - NZ_CP016537.2 Planococcus halocryophilus
220 3018416 3018688 + NZ_CP013661.2 Planococcus kocurii
221 2245125 2245397 - NZ_CP019401.1 Planococcus faecalis
222 3267210 3267482 - NZ_CP022315.1 Virgibacillus phasianinus
223 2009161 2009406 + NC_016627.1 Acetivibrio clariflavus DSM 19732
224 1185871 1186128 + NZ_CP020953.1 Clostridium drakei
225 147144 147401 + NZ_CP011803.1 Clostridium carboxidivorans P7
226 3988732 3989004 - NZ_CP024035.1 Priestia aryabhattai
227 1706881 1707099 - NC_014614.1 Acetoanaerobium sticklandii
228 2385526 2385798 - NZ_CP016534.2 Planococcus antarcticus DSM 14505
229 767040 767288 + NZ_AP019551.1 Athalassotoga saccharophila
230 1573197 1573472 - NZ_CP034118.1 Staphylospora marina
231 2341193 2341465 - NC_013791.2 Alkalihalobacillus pseudofirmus OF4
232 3625457 3625714 + NZ_CP012395.1 Clostridium autoethanogenum DSM 10061
233 1389401 1389658 + NC_014328.1 Clostridium ljungdahlii DSM 13528
234 1276027 1276296 + NZ_AP019004.1 Phascolarctobacterium faecium
235 1431549 1431821 + NZ_CP015438.1 Anoxybacillus amylolyticus
236 2526675 2526917 - NC_015275.1 Cellulosilyticum lentocellum DSM 5427
237 1715734 1716000 - NC_008346.1 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311
238 1169464 1169736 + NC_014831.1 Thermaerobacter marianensis DSM 12885
239 579618 579893 + NC_014011.1 Aminobacterium colombiense DSM 12261
240 2262743 2263009 - NZ_CP007032.1 Desulfitobacterium metallireducens DSM 15288
241 1810108 1810380 + NZ_CP015196.1 Streptococcus marmotae
242 2617772 2618035 + NC_010814.1 Geobacter lovleyi SZ
243 3082079 3082336 - NZ_CP009933.1 Clostridium scatologenes
244 1050360 1050632 + NZ_LR134483.1 Listeria grayi
245 2586248 2586520 - NZ_CP024109.1 Bacillus cytotoxicus
246 1101243 1101515 - NZ_LR594050.1 Streptococcus porcinus
247 2078329 2078601 + NZ_LR134341.1 Streptococcus pseudoporcinus
248 1403969 1404226 - NC_008593.1 Clostridium novyi NT
249 1047034 1047309 + NZ_AP014680.1 Paucilactobacillus hokkaidonensis JCM 18461
250 1078788 1079060 + NZ_AP019309.1 Intestinibaculum porci
251 2111000 2111272 - NZ_CP016540.2 Planococcus versutus
252 1908539 1908811 - NZ_CP016953.1 Streptococcus himalayensis
253 573155 573427 - NZ_CP014163.1 Aerococcus urinaehominis
254 1470522 1470764 + NZ_CP007514.1 Rubrobacter radiotolerans
255 428025 428297 + NZ_CP014699.1 Streptococcus pantholopis
256 1442448 1442705 + NC_011837.1 Clostridium kluyveri NBRC 12016
257 3505959 3506216 - NC_014365.1 Desulfarculus baarsii DSM 2075
258 667836 668111 + NZ_CP011403.1 Ligilactobacillus salivarius str. Ren
259 2567570 2567842 - NZ_CP018866.1 Sutcliffiella cohnii
260 1325391 1325636 + NZ_CP040058.1 Anaerostipes rhamnosivorans
261 2232953 2233198 - NZ_CP036345.1 Anaerostipes caccae L1-92
262 795857 796132 - NZ_CP013237.1 Streptococcus mutans
263 854804 855076 + NZ_CP034543.1 Streptococcus periodonticum
264 6105346 6105618 + NZ_CP054614.1 Paenibacillus barcinonensis
265 2204819 2205064 - NC_008261.1 Clostridium perfringens ATCC 13124
266 1778982 1779254 + NC_006270.3 Bacillus licheniformis DSM 13 = ATCC 14580
267 2931751 2932023 - NZ_CP022657.1 Tumebacillus algifaecis
268 790714 790980 + NC_011899.1 Halothermothrix orenii H 168
269 3915473 3915727 - NC_013739.1 Conexibacter woesei DSM 14684
270 894450 894725 + NZ_LN898144.1 Paucilactobacillus oligofermentans DSM 15707 = LMG 22743
271 854024 854296 + NZ_CP065061.1 Streptococcus equi subsp. zooepidemicus
272 1669966 1670238 + NZ_CP023704.1 Caldibacillus thermoamylovorans
273 2097284 2097556 - NZ_CP016543.2 Planococcus donghaensis
274 2647560 2647799 + NC_016048.1 Oscillibacter valericigenes Sjm18-20
275 1459617 1459889 - NZ_CP031733.1 Streptococcus chenjunshii
276 443624 443899 - NZ_CP017705.1 Brevibacillus laterosporus DSM 25
277 1801592 1801864 + NZ_CP023665.1 Bacillus paralicheniformis
278 1800953 1801225 + NZ_LT603683.1 Bacillus glycinifermentans
279 1181299 1181571 - NZ_CP068170.1 Erysipelatoclostridium ramosum
280 2377977 2378228 - NC_007759.1 Syntrophus aciditrophicus SB
281 3092246 3092506 + NZ_CP015519.1 Syntrophotalea acetylenivorans
282 858537 858809 + NZ_LR594046.1 Streptococcus dysgalactiae
283 34052 34315 - NZ_CP053988.1 Abiotrophia defectiva
284 846447 846719 + NZ_LS483383.1 Streptococcus cristatus ATCC 51100
285 2723118 2723390 - NC_014829.1 Evansella cellulosilytica DSM 2522
286 2595308 2595580 - NZ_CP019659.1 Paenibacillus larvae subsp. larvae
287 2250791 2251060 - NC_009253.1 Desulfotomaculum reducens MI-1
288 774386 774658 + NC_012924.1 Streptococcus suis SC84
289 1473898 1474164 - NC_013522.1 Thermanaerovibrio acidaminovorans DSM 6589
290 1501292 1501564 + NZ_CP040336.1 Bacillus luti
291 3658378 3658650 - NC_007530.2 Bacillus anthracis str. 'Ames Ancestor'
292 3727923 3728195 - NZ_CP064875.1 Bacillus toyonensis
293 3862973 3863245 - NC_011725.1 Bacillus cereus B4264
294 3867215 3867487 - NZ_CP032365.1 Bacillus wiedmannii
295 1543246 1543515 - NC_018024.1 Acetomicrobium mobile DSM 13181
296 1949917 1950189 - NZ_CP016539.2 Planococcus plakortidis
297 3277285 3277557 - NZ_CP014616.1 Sporosarcina psychrophila
298 1062462 1062734 - NZ_LS483343.1 Streptococcus ferus
299 5464964 5465236 + NZ_CP016809.1 Paenibacillus ihbetae
300 1291877 1292152 - NZ_AP014612.1 Streptococcus troglodytae
301 2184487 2184759 + NC_010337.2 Heliomicrobium modesticaldum Ice1
302 1305721 1305993 - NZ_LR134512.1 Streptococcus agalactiae
303 1566503 1566775 - NZ_CP022680.1 Streptococcus respiraculi
304 946274 946546 + NC_014220.1 Syntrophothermus lipocalidus DSM 12680
305 6538059 6538319 + NC_019751.1 Calothrix sp. PCC 6303
306 1150607 1150879 - NZ_LR134336.1 Streptococcus oralis ATCC 35037
307 1012702 1012974 - NZ_CP032621.1 Streptococcus gwangjuense
308 750889 751161 + NC_015875.1 Streptococcus pseudopneumoniae IS7493
309 1086292 1086564 - NZ_AP018400.1 Streptococcus ruminantium
310 1616890 1617165 + NZ_CP043405.1 Streptococcus ratti
311 3401298 3401570 + NZ_CP063356.1 Anaerobacillus isosaccharinicus
312 1581302 1581574 + NZ_CP048852.1 Bacillus tequilensis
313 1711296 1711538 - NZ_LR215048.1 Acholeplasma axanthum
314 1851982 1852254 + NZ_CP033052.1 Bacillus vallismortis
315 1677740 1678012 + NZ_CP051464.1 Bacillus mojavensis
316 1641420 1641692 + NZ_CP034943.1 Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499
317 1646491 1646763 + NZ_CP013984.1 Bacillus inaquosorum
318 312234 312506 - NZ_CP029364.1 Bacillus halotolerans
319 1673620 1673892 + NC_000964.3 Bacillus subtilis subsp. subtilis str. 168
320 1857095 1857370 - NC_010556.1 Exiguobacterium sibiricum 255-15
321 1988019 1988291 - NZ_CP012502.1 Bacillus beveridgei
322 5302114 5302362 + NC_010296.1 Microcystis aeruginosa NIES-843
323 1036727 1036999 - NC_016605.1 Pediococcus claussenii ATCC BAA-344
324 1156195 1156470 + NZ_CP011366.1 Salinicoccus halodurans
325 1972468 1972740 - NZ_CP016538.2 Planococcus maritimus
326 1995711 1995983 - NZ_CP059540.1 Planococcus maritimus
327 1768142 1768414 - NZ_CP013659.2 Planococcus rifietoensis
328 1402034 1402276 + NZ_CP031115.1 Rubrobacter indicoceani
329 1038638 1038913 - NZ_LT906439.1 Streptococcus merionis
330 4370310 4370582 + NZ_CP045298.1 Paenibacillus brasilensis
331 3491606 3491878 - NZ_CP020028.1 Paenibacillus kribbensis
332 3840152 3840424 + NC_016641.1 Paenibacillus terrae HPL-003
333 1262692 1262964 - NZ_CP068053.1 Peribacillus psychrosaccharolyticus
334 4813118 4813390 - NZ_CP026520.1 Paenibacillus chitinolyticus
335 410577 410798 - NZ_AP013035.1 Thermosulfidibacter takaii ABI70S6
336 1103485 1103760 + NZ_CP054482.1 Macrococcus bohemicus
337 1628912 1629178 - NZ_CP064056.1 Staphylococcus lloydii
338 1639759 1640025 + NC_011979.1 Geobacter daltonii FRC-32
339 1377921 1378169 - NZ_CP021255.1 Desulfobulbus oralis
340 948642 948914 - NZ_CP031092.1 Salicibibacter kimchii
341 268653 268889 + NC_022538.1 Acholeplasma palmae J233
342 1338828 1339070 + NZ_CP032364.1 Lachnoanaerobaculum umeaense
343 1097341 1097613 + NZ_CP030105.1 Lactiplantibacillus plantarum
344 1714546 1714818 + NZ_CP032757.1 Lactiplantibacillus pentosus
345 766332 766604 + NZ_CP019981.1 Pediococcus inopinatus
346 675145 675393 + NZ_LT906470.1 Veillonella rodentium
347 73251 73496 - NZ_CP067016.1 Anaerococcus obesiensis
348 1351561 1351806 - NZ_CP066014.1 Anaerococcus vaginalis
349 1609684 1609950 - NZ_LR134089.1 Staphylococcus saprophyticus
350 1479389 1479634 - NC_022549.1 Acholeplasma brassicae
351 514508 514726 - NC_014314.1 Dehalogenimonas lykanthroporepellens BL-DC-9
352 895356 895628 + NZ_CP053421.1 Pediococcus acidilactici
353 855375 855647 + NC_008525.1 Pediococcus pentosaceus ATCC 25745
354 3861799 3862065 - NZ_AP023213.1 Citrifermentans bremense
355 3943249 3943515 - NC_011146.1 Citrifermentans bemidjiense Bem
356 1027706 1027978 + NZ_CP014167.1 Paenibacillus yonginensis
357 1007617 1007892 + NZ_CP047361.1 Macrococcus canis
358 1084351 1084617 + NZ_CP013114.1 Staphylococcus equorum
359 712951 713226 - NZ_CP065729.1 Macrococcus caseolyticus
360 1491139 1491387 - NZ_LR778174.1 Veillonella parvula
361 137787 138041 - NZ_CP060822.1 Cylindrospermopsis curvispora GIHE-G1
362 1379587 1379835 - NZ_AP022321.1 Veillonella nakazawae
363 1432476 1432724 - NZ_LR134375.1 Veillonella dispar
364 1712062 1712337 + NZ_CP066042.1 Staphylococcus saccharolyticus
365 1206135 1206407 - NZ_CP032627.1 Lactococcus allomyrinae
366 2890617 2890889 - NZ_CP014150.1 Paeniclostridium sordellii
367 894172 894444 + NZ_CP012805.1 Streptococcus anginosus
368 854672 854947 + NZ_CP047141.1 Ligilactobacillus animalis
369 2676718 2676966 + NC_019753.1 Crinalium epipsammum PCC 9333
370 1537934 1538209 - NZ_LT906462.1 Mammaliicoccus stepanovicii
371 1951132 1951404 + NZ_CP012294.1 Pediococcus damnosus
372 3434178 3434450 + NZ_CP021434.1 Tumebacillus avium
373 1461538 1461804 - NZ_CP065712.1 Staphylococcus auricularis
374 2801986 2802249 - NZ_CP010311.1 Geoalkalibacter subterraneus
375 731811 732053 + NZ_CP009302.1 Berryella intestinalis
376 2595525 2595785 - NC_007498.2 Syntrophotalea carbinolica DSM 2380
377 3084724 3084966 + NZ_AP014638.1 Leptolyngbya boryana IAM M-101
378 1011486 1011761 + NC_014925.1 Staphylococcus pseudintermedius HKU10-03
379 917265 917531 - NZ_CP018199.1 Staphylococcus succinus
380 691678 691953 + NZ_CP068061.1 Mammaliicoccus vitulinus
381 1460327 1460602 - NZ_CP022046.2 Mammaliicoccus sciuri
382 1243810 1244052 - NC_010163.1 Acholeplasma laidlawii PG-8A
383 1026830 1027072 + NZ_CP011402.1 Denitrobacterium detoxificans
384 1704919 1705185 - NZ_CP008724.1 Staphylococcus xylosus
385 93088 93363 - NZ_CP033732.1 Staphylococcus hominis
386 890130 890405 + NZ_CP013911.1 Staphylococcus haemolyticus
387 1227347 1227607 + NC_014248.1 'Nostoc azollae' 0708
388 2577967 2578212 + NC_019771.1 Anabaena cylindrica PCC 7122
389 1276739 1276945 + NC_014926.1 Thermovibrio ammonificans HB-1
390 970950 971228 - NZ_CP019573.1 Abyssicoccus albus
391 987805 988050 + NZ_LT635772.1 Anaerococcus mediterraneensis
392 1665643 1665918 - NZ_CP035288.1 Staphylococcus epidermidis
393 1727420 1727695 - NZ_AP018587.1 Staphylococcus caprae
394 2083001 2083276 + NC_020520.1 Ilumatobacter coccineus YM16-304
395 857619 857894 + NZ_LT906464.1 Staphylococcus muscae
396 2250415 2250663 + NZ_CP042326.1 Euhalothece natronophila Z-M001
397 558896 559171 - NZ_CP014022.1 Staphylococcus lugdunensis
398 585670 585918 + NZ_CP054698.1 Nostoc edaphicum CCNP1411
399 3531837 3532082 + NC_010628.1 Nostoc punctiforme PCC 73102
400 1230265 1230540 + NZ_LR134304.1 Staphylococcus schweitzeri
401 1159735 1160010 + NC_007795.1 Staphylococcus aureus subsp. aureus NCTC 8325
402 1604661 1604936 - NZ_LR134242.1 Staphylococcus warneri
403 2375974 2376249 + NC_022737.1 Staphylococcus pasteuri SP1
404 1706633 1706908 + NZ_CP027770.1 Staphylococcus felis
405 4139676 4139930 + NC_009925.1 Acaryochloris marina MBIC11017
406 1185586 1185861 + NZ_LT906460.1 Staphylococcus simiae
407 541258 541533 + NZ_CP007601.1 Staphylococcus capitis subsp. capitis
408 2338609 2338815 - NC_014501.1 Gloeothece verrucosa PCC 7822
409 1720390 1720638 + NC_019748.1 Stanieria cyanosphaera PCC 7437
410 2221223 2221498 + NZ_CP020773.1 Staphylococcus lutrae
411 397824 398069 - NZ_CP047242.1 Trichormus variabilis 0441
412 192551 192817 + NZ_CP022096.2 Staphylococcus pettenkoferi
413 3216693 3216932 - NC_019780.1 Dactylococcopsis salina PCC 8305
414 389926 390177 + NZ_AP018202.1 Thermostichus vulcanus NIES-2134
415 35569 35820 - NC_004113.1 Thermosynechococcus vestitus BP-1
416 5838242 5838490 - NC_011729.1 Gloeothece citriformis PCC 7424
417 1025450 1025698 + NZ_CP018092.1 Synechococcus lividus PCC 6715
418 4498797 4499048 + NZ_CP024785.1 Nostoc flagelliforme CCNUN1
++ More..
Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_CP021850.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF01782.20 0.89 372 341 same-strand RimM N-terminal domain
2 PF05239.18 0.85 352 351.0 same-strand PRC-barrel domain
3 PF13083.8 0.86 357 19 same-strand KH domain
4 PF00448.24 0.85 353 143 same-strand SRP54-type protein, GTPase domain
5 PF02978.21 0.85 353 90 same-strand Signal peptide binding domain
6 PF02881.21 0.85 353 142.0 same-strand SRP54-type protein, helical bundle domain
7 PF01746.23 0.88 364 852.0 same-strand tRNA (Guanine-1)-methyltransferase
8 PF01245.22 0.74 307 1799 same-strand Ribosomal protein L19
9 PF04297.16 0.66 276 1465 same-strand Putative helix-turn-helix protein, YlxM / p13 like
++ More..