ProsmORF-pred
Result : EXP03155
Protein Information
Information Type Description
Protein name EXP03155
NCBI Accession ID
Organism Escherichia
Left
Right
Strand
Nucleotide Sequence ATGTCTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTACAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAA
Sequence MSKGKKRSGARPGRPQPLRGTKGKRTGARLWYVGGQQF
Source of smORF Metagenomic Ribo-seq
Function The ORF matches to the profile of PHA00008. Profile Description: DNA packaging protein
The ORF matches to the profile of pfam04726. Profile Description: Microvirus J protein. This small protein is involved in DNA packaging, interacting with DNA via its hydrophobic carboxyl terminus. In bacteriophage phi-X174, J is present in 60 copies, and forms an S-shaped polypeptide chain without any secondary structure. It is thought to interact with DNA through simple charge interactions.
Pubmed ID 32601270
Domain CDD:282569,CDD:222770
Functional Category Conserved domain based functional assignment
Uniprot ID
ORF Length (Amino Acid) 38
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