* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LR699004.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF01566.20
|
1.0
|
2
|
-54.0
|
opposite-strand
|
Natural resistance-associated macrophage protein
|
2
|
PF00999.23
|
1.0
|
2
|
12.0
|
same-strand
|
Sodium/hydrogen exchanger family
|
3
|
PF01554.20
|
1.0
|
2
|
1457.0
|
same-strand
|
MatE
|
4
|
PF14667.8
|
1.0
|
2
|
1457.0
|
same-strand
|
Polysaccharide biosynthesis C-terminal domain
|
5
|
PF13419.8
|
1.0
|
2
|
2899.0
|
opposite-strand
|
Haloacid dehalogenase-like hydrolase
|
6
|
PF00702.28
|
1.0
|
2
|
2899.0
|
opposite-strand
|
haloacid dehalogenase-like hydrolase
|
7
|
PF02548.17
|
1.0
|
2
|
3602.0
|
opposite-strand
|
Ketopantoate hydroxymethyltransferase
|
++ More..