* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP053825.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF12804.9
|
1.0
|
5
|
4694
|
opposite-strand
|
MobA-like NTP transferase domain
|
2
|
PF03553.16
|
1.0
|
5
|
2061
|
same-strand
|
Na+/H+ antiporter family
|
3
|
PF13726.8
|
1.0
|
5
|
2061
|
same-strand
|
Na+-H+ antiporter family
|
4
|
PF00920.23
|
1.0
|
5
|
250
|
opposite-strand
|
Dehydratase family
|
5
|
PF11396.10
|
1.0
|
5
|
2270
|
same-strand
|
Putative beta-lactamase-inhibitor-like, PepSY-like
|
6
|
PF00004.31
|
1.0
|
5
|
2752
|
same-strand
|
ATPase family associated with various cellular activities (AAA)
|
7
|
PF02253.17
|
0.6
|
3
|
3838
|
opposite-strand
|
Phospholipase A1
|
8
|
PF04461.15
|
0.6
|
3
|
4942
|
same-strand
|
Protein of unknown function (DUF520)
|
++ More..