ProsmORF-pred
Result : B7K4V5
Protein Information
Information Type Description
Protein name 50S ribosomal protein L35
NCBI Accession ID CP001287.1
Organism Rippkaea orientalis (strain PCC 8801) (Cyanothece sp. (strain PCC 8801))
Left 2697232
Right 2697435
Strand -
Nucleotide Sequence ATGCCTAAACTAAAAACTCGCAAAGCTGCGGCTAAGCGTTTTCGTGTTACAGGGAGTGGTAAGAAGATTTTCCGCCGTAAAGCCTTCAAAAACCACCTATTACAGCATAAAAGTTCTGAACGCAAGTTCCGTCGTTTATCTGGCCTTTCCTTGGTGAGTGAACAAGACGAAGCAAATGTGCGTTTAATGCTTCCCTATCTCTAG
Sequence MPKLKTRKAAAKRFRVTGSGKKIFRRKAFKNHLLQHKSSERKFRRLSGLSLVSEQDEANVRLMLPYL
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl00392. Profile Description: Ribosomal protein L35. This ribosomal protein is found in bacteria and organelles only. It is not closely related to any eukaryotic or archaeal ribosomal protein. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Pubmed ID 21972240
Domain CDD:412354
Functional Category Ribosomal_protein
Uniprot ID B7K4V5
ORF Length (Amino Acid) 67
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 531
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 4393319 4393522 - NC_014501.1 Gloeothece verrucosa PCC 7822
2 4721583 4721786 + NC_011729.1 Gloeothece citriformis PCC 7424
3 2124806 2125009 - NC_019748.1 Stanieria cyanosphaera PCC 7437
4 1676834 1677037 + NC_019689.1 Pleurocapsa sp. PCC 7327
5 3993341 3993544 - NC_010296.1 Microcystis aeruginosa NIES-843
6 1901093 1901302 - NC_019776.1 Cyanobacterium aponinum PCC 10605
7 4311968 4312165 - NC_019753.1 Crinalium epipsammum PCC 9333
8 555619 555816 + NZ_CP060822.1 Cylindrospermopsis curvispora GIHE-G1
9 6117417 6117614 - NC_019729.1 Oscillatoria nigro-viridis PCC 7112
10 5590589 5590786 + NZ_CP047242.1 Trichormus variabilis 0441
11 1738299 1738499 + NC_019780.1 Dactylococcopsis salina PCC 8305
12 4382611 4382808 - NC_014248.1 'Nostoc azollae' 0708
13 1012618 1012815 + NC_019693.1 Oscillatoria acuminata PCC 6304
14 4872413 4872610 + NZ_CP054698.1 Nostoc edaphicum CCNP1411
15 5552025 5552222 + NC_019695.1 Chroococcidiopsis thermalis PCC 7203
16 6117779 6117976 - NC_010628.1 Nostoc punctiforme PCC 73102
17 4483545 4483742 - NZ_CP031941.1 Nostoc sphaeroides
18 3318284 3318481 + NZ_CP024785.1 Nostoc flagelliforme CCNUN1
19 5726424 5726621 - NC_019771.1 Anabaena cylindrica PCC 7122
20 1830140 1830337 - NC_019751.1 Calothrix sp. PCC 6303
21 1680231 1680428 + NC_005042.1 Prochlorococcus marinus subsp. marinus str. CCMP1375
22 2114302 2114499 - NC_009925.1 Acaryochloris marina MBIC11017
23 1168740 1168937 + NZ_CP018092.1 Synechococcus lividus PCC 6715
24 1727441 1727641 + NZ_CP042326.1 Euhalothece natronophila Z-M001
25 2108944 2109141 - NZ_AP018202.1 Thermostichus vulcanus NIES-2134
26 2239933 2240130 - NC_004113.1 Thermosynechococcus vestitus BP-1
27 3686432 3686629 - NZ_AP014638.1 Leptolyngbya boryana IAM M-101
28 2235492 2235692 + NC_019675.1 Cyanobium gracile PCC 6307
29 419701 419898 + NC_008576.1 Magnetococcus marinus MC-1
30 111112 111309 + NZ_CP021983.2 Halomicronema hongdechloris C2206
31 2963866 2964063 - NC_005125.1 Gloeobacter violaceus PCC 7421
32 825181 825378 + NZ_CP034118.1 Staphylospora marina
33 2527872 2528066 - NZ_CP011853.1 Gordonia phthalatica
34 434268 434462 + NZ_CP033972.1 Gordonia insulae
35 1688880 1689077 + NZ_CP010311.1 Geoalkalibacter subterraneus
36 3044881 3045075 - NC_013441.1 Gordonia bronchialis DSM 43247
37 2657873 2658067 - NZ_CP027433.1 Gordonia iterans
38 2470351 2470548 + NZ_CP054140.1 Desulfobulbus oligotrophicus
39 871979 872176 + NC_016629.1 Desulfocurvibacter africanus subsp. africanus str. Walvis Bay
40 2971968 2972162 - NC_016906.1 Gordonia polyisoprenivorans VH2
41 3948369 3948563 - NZ_CP059694.1 Gordonia rubripertincta
42 3478734 3478931 - NZ_CP015136.1 Luteitalea pratensis
43 1170934 1171131 + NZ_AP019004.1 Phascolarctobacterium faecium
44 1668787 1668984 + NC_007498.2 Syntrophotalea carbinolica DSM 2380
45 2011687 2011884 - NZ_CP012154.1 Wenzhouxiangella marina
46 3799414 3799608 - NZ_CP027114.1 Gordonia alkanivorans
47 3985713 3985910 - NZ_CP012898.1 Algibacter alginicilyticus
48 644290 644487 + NC_015520.1 Mahella australiensis 50-1 BON
49 5450083 5450277 + NZ_CP032382.1 Chryseolinea soli
50 2354826 2355023 - NZ_CP036259.1 Sporomusa termitida
51 1073775 1073972 + NC_015436.1 Sphaerochaeta coccoides DSM 17374
52 2455023 2455220 - NC_008344.1 Nitrosomonas eutropha C91
53 1782707 1782907 - NZ_AP022873.1 Dissulfurispira thermophila
54 2850092 2850286 - NZ_CP035934.2 Acinetobacter cumulans
55 1492497 1492694 - NZ_CP021255.1 Desulfobulbus oralis
56 712345 712539 + NZ_CP049801.1 Acinetobacter shaoyimingii
57 2487977 2488171 - NZ_CP044483.1 Acinetobacter schindleri
58 562716 562910 + NZ_CP045650.1 Acinetobacter wanghuae
59 525772 525969 + NZ_AP018558.1 Hydrogenophilus thermoluteolus
60 294389 294583 - NZ_CP012808.1 Acinetobacter equi
61 2416162 2416356 - NZ_CP041970.1 Acinetobacter dispersus
62 537142 537339 + NZ_CP015519.1 Syntrophotalea acetylenivorans
63 274588 274794 + NZ_CP020921.1 Thermodesulfobium acidiphilum
64 298542 298748 + NC_015499.1 Thermodesulfobium narugense DSM 14796
65 1624426 1624623 + NC_014972.1 Desulfobulbus propionicus DSM 2032
66 1703003 1703197 - NZ_CP021235.1 Pontibacter actiniarum
67 4459541 4459735 - NZ_CP009621.1 Pontibacter korlensis
68 2795003 2795197 - NZ_CP049916.1 Acinetobacter lanii
69 1352254 1352451 + NC_018870.1 Thermacetogenium phaeum DSM 12270
70 2384916 2385110 + NZ_CP014955.1 Mycobacteroides abscessus
71 2323993 2324187 + NZ_CP007220.1 Mycobacteroides chelonae CCUG 47445
72 1591668 1591865 - NC_006138.1 Desulfotalea psychrophila LSv54
73 769161 769355 - NZ_AP022593.1 Mycolicibacterium arabiense
74 3211519 3211719 - NZ_AP017313.1 Mucilaginibacter gotjawali
75 2110139 2110336 - NZ_CP010802.1 Desulfuromonas soudanensis
76 2084459 2084653 + NZ_CP024633.1 Mycobacteroides salmoniphilum
77 704834 705031 + NC_016043.1 Taylorella asinigenitalis MCE3
78 559531 559728 + NZ_LT906446.1 Megamonas hypermegale
79 2304832 2305026 - NZ_CP010271.1 Mycobacteroides saopaulense
80 2031513 2031707 - NZ_LR134501.1 Nocardiopsis dassonvillei
81 4179797 4179991 + NZ_CP014766.1 Pontibacter akesuensis
82 65379 65576 + NZ_CP015125.1 Dokdonia donghaensis DSW-1
83 2513550 2513744 + NZ_CP011530.1 Mycobacteroides immunogenum
84 773189 773386 + NC_013740.1 Acidaminococcus fermentans DSM 20731
85 2927688 2927885 + NZ_CP071376.1 Clostridium gasigenes
86 3049653 3049850 + NZ_CP071376.1 Clostridium gasigenes
87 1219561 1219758 + NZ_CP009240.1 Megasphaera elsdenii 14-14
88 2465337 2465522 - NC_007204.1 Psychrobacter arcticus 273-4
89 2302330 2302527 - NZ_CP035108.1 Geovibrio thiophilus
90 3384987 3385181 - NZ_AP023172.1 Rhodococcus qingshengii
91 686409 686606 - NZ_CP029462.1 Megasphaera stantonii
92 4123777 4123971 + NZ_AP022588.1 Mycolicibacterium sediminis
93 751693 751887 - NZ_CP034438.1 Flaviflexus salsibiostraticola
94 2252844 2253038 + NZ_AP018165.1 [Mycobacterium] stephanolepidis
95 756379 756576 + NZ_AP022321.1 Veillonella nakazawae
96 763631 763828 + NZ_LR134375.1 Veillonella dispar
97 864183 864380 + NZ_LR778174.1 Veillonella parvula
98 647371 647565 + NZ_CP024632.1 Acinetobacter junii
99 3313847 3314041 - NZ_CP022208.1 Rhodococcus pyridinivorans
100 2764704 2764898 - NZ_CP029397.2 Acinetobacter defluvii
101 3308058 3308255 - NZ_CP028842.1 Clostridium botulinum
102 3551061 3551258 - NZ_CP011663.1 Clostridium sporogenes
103 1108006 1108200 - NZ_AP022603.1 Mycolicibacterium fallax
104 3001907 3002101 - NZ_LT906450.1 Rhodococcus rhodochrous
105 2832916 2833110 - NZ_CP030880.1 Acinetobacter haemolyticus
106 1928473 1928667 + NC_008255.1 Cytophaga hutchinsonii ATCC 33406
107 5355553 5355747 - NZ_AP022600.1 Mycolicibacterium tokaiense
108 2327013 2327210 - NZ_CP061703.1 Mesoflavibacter profundi
109 1284145 1284330 - NZ_CP012678.1 Psychrobacter urativorans
110 1238128 1238325 + NZ_AP022345.1 Fluviibacter phosphoraccumulans
111 3089663 3089863 - NZ_LR590470.1 Sphingobacterium daejeonense
112 4593435 4593632 - NZ_CP007451.1 Draconibacterium orientale
113 2895106 2895300 - NZ_CP016895.1 Acinetobacter larvae
114 1041299 1041496 - NC_004757.1 Nitrosomonas europaea ATCC 19718
115 2366871 2367065 - NC_014165.1 Thermobispora bispora DSM 43833
116 2746606 2746803 - NZ_LT907988.1 Orrella dioscoreae
117 3096893 3097078 - NZ_CP014945.1 Psychrobacter alimentarius
118 2945965 2946165 - NZ_CP022743.1 Mucilaginibacter xinganensis
119 3672396 3672590 + NZ_AP022595.1 Mycolicibacterium sarraceniae
120 1335046 1335243 - NZ_LT906470.1 Veillonella rodentium
121 2579357 2579551 - NZ_CP071766.1 Acinetobacter towneri
122 1617613 1617810 - NZ_CP029256.1 Christensenella minuta
123 3794656 3794856 + NZ_CP042436.1 Mucilaginibacter ginsenosidivorans
124 964794 964991 + NC_008593.1 Clostridium novyi NT
125 1069903 1070100 + NZ_CP022987.1 Pusillimonas thiosulfatoxidans
126 2967743 2967937 - NZ_CP032134.1 Acinetobacter chinensis
127 2829632 2829817 - NC_007969.1 Psychrobacter cryohalolentis K5
128 9464718 9464915 + NZ_CP016211.1 Minicystis rosea
129 1517243 1517440 - NC_014209.1 Thermoanaerobacter mathranii subsp. mathranii str. A3
130 1535537 1535734 - NC_013921.1 Thermoanaerobacter italicus Ab9
131 3661531 3661725 + NC_015914.1 Cyclobacterium marinum DSM 745
132 5655829 5656029 - NZ_LR590484.1 Sphingobacterium thalpophilum
133 570973 571170 + NC_010001.1 Lachnoclostridium phytofermentans ISDg
134 3317281 3317475 - NZ_CP015121.1 Acinetobacter baumannii
135 1791633 1791830 + NZ_CP013019.1 Clostridium pasteurianum
136 10160203 10160400 - NZ_CP012159.1 Chondromyces crocatus
137 807850 808047 + NZ_AP018042.1 Labilibaculum antarcticum
138 180069 180266 - NZ_CP042476.1 Antarcticibacterium arcticum
139 3200311 3200505 + NZ_AP022560.1 Mycolicibacterium moriokaense
140 722331 722528 + NC_021291.1 Spiribacter salinus M19-40
141 2610008 2610205 + NC_018518.1 Bordetella pertussis 18323
142 2108984 2109181 + NZ_AP019378.1 Bordetella parapertussis
143 1842958 1843155 + NZ_LR134326.1 Bordetella bronchiseptica
144 496278 496472 + NZ_AP022565.1 Mycolicibacterium alvei
145 1251822 1252022 + NZ_CP030848.1 Sphingobacterium hotanense
146 2864109 2864303 - NZ_CP027793.1 Rhodococcus hoagii
147 800578 800775 + NZ_CP016786.1 Clostridium isatidis
148 1437079 1437276 - NZ_CP016786.1 Clostridium isatidis
149 288091 288288 + NZ_CP047165.1 Pelistega ratti
150 7750861 7751061 - NZ_CP042437.1 Mucilaginibacter ginsenosidivorax
151 3027427 3027621 + NZ_CP025546.1 Mycobacterium paragordonae
152 1615160 1615357 + NZ_CP040924.1 Clostridium thermarum
153 683064 683261 + NZ_CP021060.1 Taylorella equigenitalis
154 3282263 3282460 - NZ_CP040812.1 Antarcticibacterium flavum
155 1433932 1434129 + NZ_AP019755.1 Nitrosomonas stercoris
156 2551309 2551506 - NZ_CP043146.1 Bordetella holmesii
157 3457339 3457533 - NZ_AP022610.1 Mycolicibacterium madagascariense
158 1269894 1270094 + NZ_CP054139.1 Mucilaginibacter mali
159 1799580 1799777 + NZ_CP045851.1 Actinomarinicola tropica
160 10114624 10114821 - NC_010162.1 Sorangium cellulosum So ce56
161 1321304 1321501 + NZ_LT906482.1 Eikenella corrodens
162 1377270 1377467 - NC_014758.1 Calditerrivibrio nitroreducens DSM 19672
163 2445900 2446097 + NZ_CP020822.1 Tenacibaculum maritimum
164 2882100 2882294 + NZ_CP011491.1 Mycolicibacterium vaccae 95051
165 1773793 1773990 + NZ_CP016440.1 Bordetella pseudohinzii
166 843436 843633 - NZ_CP022387.1 Capnocytophaga stomatis
167 892509 892706 + NZ_CP025791.1 Flavivirga eckloniae
168 1529382 1529582 - NZ_CP071878.1 Mucilaginibacter gossypii
169 5877771 5877965 - NZ_AP022596.1 Mycolicibacterium helvum
170 282626 282823 - NZ_CP011451.1 Nitrosomonas communis
171 4624337 4624534 + NZ_CP021904.1 Alkalitalea saponilacus
172 1894905 1895102 + NZ_CP022378.1 Capnocytophaga cynodegmi
173 2687712 2687909 + NC_014836.1 Desulfurispirillum indicum S5
174 3540820 3541017 + NZ_CP021395.1 Bordetella hinzii
175 2091457 2091654 - NZ_CP031700.1 Neisseria zalophi
176 2209289 2209486 - NC_010645.1 Bordetella avium 197N
177 1083486 1083683 + NZ_CP028901.1 Algicoccus marinus
178 2497215 2497409 - NC_013521.1 Sanguibacter keddieii DSM 10542
179 706514 706711 + NZ_CP034120.1 Glaciecola amylolytica
180 1800418 1800618 - NZ_CP066775.1 Mucilaginibacter ginkgonis
181 2370961 2371161 - NZ_CP032869.1 Mucilaginibacter celer
182 2082061 2082255 + NZ_AP022612.1 Mycolicibacterium confluentis
183 378717 378914 - NZ_LR134533.1 Neisseria weaveri
184 1488312 1488509 - NZ_LR134516.1 Neisseria animaloris
185 2310878 2311075 - NZ_LT906434.1 Neisseria zoodegmatis
186 3903567 3903764 + NC_014041.1 Zunongwangia profunda SM-A87
187 3987755 3987949 + NZ_AP022598.1 Mycolicibacterium parafortuitum
188 591630 591824 + NZ_AP022608.1 Mycolicibacterium gadium
189 275435 275632 - NC_020156.1 Nonlabens dokdonensis DSW-6
190 2191329 2191526 + NZ_CP016171.1 Bordetella bronchialis
191 1905566 1905760 - NZ_AP022601.1 Mycobacterium gallinarum
192 2468582 2468779 - NC_014376.1 [Clostridium] saccharolyticum WM1
193 7148190 7148384 - NZ_AP022567.1 Mycolicibacterium mageritense
194 852237 852434 - NC_008340.1 Alkalilimnicola ehrlichii MLHE-1
195 304979 305176 - NC_015321.1 Fluviicola taffensis DSM 16823
196 372414 372608 + NZ_AP022616.1 Mycolicibacterium phocaicum
197 979084 979278 - NZ_AP022577.1 Mycolicibacterium aubagnense
198 3431820 3432014 - NZ_CP062008.1 Mycolicibacterium mucogenicum DSM 44124
199 1174928 1175122 + NZ_LS483423.1 Jonesia denitrificans
200 5062493 5062687 - NZ_AP022599.1 Mycolicibacterium pulveris
201 2289801 2289995 - NZ_CP020569.1 Streptomyces gilvosporeus
202 2227618 2227812 + NZ_LT906483.1 Mycolicibacterium thermoresistibile
203 2489745 2489942 - NZ_CP003915.1 Advenella mimigardefordensis DPN7
204 2505729 2505923 + NC_013510.1 Thermomonospora curvata DSM 43183
205 1552719 1552916 - NC_014220.1 Syntrophothermus lipocalidus DSM 12680
206 937213 937410 + NC_014365.1 Desulfarculus baarsii DSM 2075
207 3233324 3233518 - NZ_AP022561.1 Mycolicibacterium aichiense
208 7644294 7644488 + NZ_CP023688.1 Streptomyces rimosus
209 2206263 2206463 + NC_013061.1 Pedobacter heparinus DSM 2366
210 2263181 2263381 - NZ_CP024091.1 Pedobacter ginsengisoli
211 1398434 1398625 - NZ_CP014234.1 Moraxella osloensis
212 3718865 3719062 + NC_020304.1 Desulfocapsa sulfexigens DSM 10523
213 2236315 2236509 - NZ_CP039291.1 Cellulomonas shaoxiangyii
214 3079414 3079608 - NZ_AP022618.1 Mycolicibacterium insubricum
215 456857 457054 + NZ_CP045798.1 Thermoanaerosceptrum fracticalcis
216 1195316 1195513 - NZ_CP059567.1 Neisseria shayeganii
217 3624462 3624656 + NZ_AP022572.1 Mycobacterium shottsii
218 2693547 2693741 + NZ_AP018410.1 Mycobacterium pseudoshottsii JCM 15466
219 4295675 4295869 + NZ_CP058277.1 Mycobacterium marinum
220 1429763 1429960 + NZ_CP059564.1 Alysiella filiformis
221 4229180 4229389 - NZ_CP051774.1 Luteolibacter luteus
222 1415948 1416142 - NC_008578.1 Acidothermus cellulolyticus 11B
223 4589428 4589622 - NZ_CP012643.1 Rufibacter tibetensis
224 4494346 4494543 - NC_022600.1 Gloeobacter kilaueensis JS1
225 508784 508981 - NC_006513.1 Aromatoleum aromaticum EbN1
226 3126420 3126617 + NZ_CP059467.1 Aromatoleum bremense
227 1900033 1900227 + NZ_LT906469.1 Mycolicibacter terrae
228 397711 397908 - NZ_AP014564.1 Ichthyobacterium seriolicida
229 1819707 1819901 - NZ_AP022614.1 Mycobacterium parmense
230 1441163 1441357 - NC_015437.1 Selenomonas sputigena ATCC 35185
231 37145 37342 + NZ_CP039456.1 Changchengzhania lutea
232 1750933 1751130 - NZ_CP019342.1 Nonlabens tegetincola
233 3586022 3586216 - NZ_CP011269.1 Mycolicibacterium fortuitum
234 4262161 4262352 - NZ_CP022753.1 Nocardiopsis gilva YIM 90087
235 1742616 1742810 - NZ_AP022620.1 Mycolicibacterium anyangense
236 3572350 3572544 - NC_018691.1 Alcanivorax dieselolei B5
237 4002413 4002607 + NZ_CP043474.1 Mycobacterium grossiae
238 453797 453994 - NZ_CP019448.1 Simonsiella muelleri ATCC 29453
239 2398498 2398695 + NC_014393.1 Clostridium cellulovorans 743B
240 1587444 1587641 - NZ_CP059560.1 Aromatoleum petrolei
241 611123 611326 - NZ_CP006950.1 Dehalococcoides mccartyi CG4
242 1805908 1806102 - NZ_CP023691.1 Streptomyces platensis
243 1479038 1479235 - NZ_CP034549.1 Nonlabens ponticola
244 2654286 2654483 - NC_007519.1 Desulfovibrio alaskensis G20
245 1149309 1149506 - NZ_LT899436.1 Tenacibaculum jejuense
246 1287840 1288037 + NZ_CP028339.1 Thauera aromatica K172
247 1496995 1497192 + NZ_CP018155.1 Tenacibaculum todarodis
248 2047182 2047391 + NZ_AP021898.1 Akkermansia muciniphila
249 1560167 1560361 + NC_015564.1 Hoyosella subflava DQS3-9A1
250 3540324 3540518 - NC_008726.1 Mycolicibacterium vanbaalenii PYR-1
251 3793895 3794092 - NZ_CP015756.1 Clostridium estertheticum subsp. estertheticum
252 699356 699550 + NZ_AP022569.1 Mycobacterium cookii
253 2233088 2233285 + NZ_CP018839.1 Thauera chlorobenzoica
254 581005 581202 + NZ_CP016359.1 Gramella flava JLT2011
255 2175715 2175909 + NZ_LR134355.1 Mycolicibacterium chitae
256 1306011 1306208 + NZ_CP032364.1 Lachnoanaerobaculum umeaense
257 71519 71716 - NZ_CP018153.1 Gramella salexigens
258 152762 152959 + NZ_CP028136.1 Gramella fulva
259 2311684 2311881 - NZ_HG917868.1 Clostridium bornimense
260 672544 672741 - NC_008571.1 Gramella forsetii KT0803
261 2578546 2578740 - NZ_CP070326.1 Streptomyces noursei
262 6407498 6407692 + NZ_CP023702.1 Streptomyces nitrosporeus
263 1738549 1738743 - NZ_AP022575.1 Mycobacterium shinjukuense
264 3364156 3364350 - NZ_LR134356.1 Mycolicibacterium aurum
265 1029001 1029198 + NZ_AP018721.1 Sulfuritortus calidifontis
266 276317 276511 + NZ_LS483468.1 Rhodococcus coprophilus
267 1778925 1779119 - NZ_CP019457.1 Streptomyces lydicus
268 1312855 1313049 - NZ_CP029196.1 Streptomyces venezuelae
269 2726510 2726704 - NZ_CP012836.1 Algoriphagus sanaruensis
270 2651861 2652058 - NC_017310.1 Desulfovibrio vulgaris RCH1
271 1805933 1806127 + NC_014151.1 Cellulomonas flavigena DSM 20109
272 457804 458001 - NZ_LT996885.1 Dialister massiliensis
273 1921318 1921515 - NZ_LT906477.1 Clostridium cochlearium
274 1035362 1035556 - NZ_CP032229.1 Streptomyces seoulensis
275 2402784 2402981 + NZ_CP026328.2 Acidithiobacillus caldus
276 4509298 4509495 - NZ_LR134338.1 Brevibacillus brevis
277 6026852 6027046 + NZ_CP034279.1 Streptomyces ficellus
278 1703837 1704031 - NZ_CP010407.1 Streptomyces vietnamensis
279 4824805 4824999 - NZ_AP022615.1 Mycobacterium heidelbergense
280 1852928 1853122 + NC_000962.3 Mycobacterium tuberculosis H37Rv
281 1879657 1879851 + NC_015848.1 Mycobacterium canettii CIPT 140010059
282 1592040 1592234 - NZ_AP022563.1 Mycolicibacterium duvalii
283 1599821 1600015 - NC_012803.1 Micrococcus luteus NCTC 2665
284 1611700 1611894 + NZ_AP022581.1 Mycobacterium lacus
285 1399239 1399433 - NZ_CP072931.1 Streptomyces auratus AGR0001
286 15113 15310 - NZ_LT635772.1 Anaerococcus mediterraneensis
287 3703913 3704107 + NZ_AP022589.1 Mycolicibacter minnesotensis
288 3011433 3011627 + NZ_CP020809.1 Mycobacterium dioxanotrophicus
289 1597413 1597607 - NZ_CP023693.1 Streptomyces cinereoruber
290 2109578 2109772 - NC_008260.1 Alcanivorax borkumensis SK2
291 1360587 1360781 + NZ_AP022609.1 Mycolicibacter hiberniae
292 1800428 1800622 + NC_015514.1 Cellulomonas fimi ATCC 484
293 2019476 2019670 - NZ_CP034539.1 Streptomyces cyaneochromogenes
294 1500232 1500426 - NZ_CP023407.1 Streptomyces fungicidicus
295 2717669 2717878 + NZ_LT629973.1 Akkermansia glycaniphila
296 4234306 4234500 - NZ_AP022606.1 Mycobacterium branderi
297 3894667 3894861 - NZ_AP022574.1 Mycolicibacterium psychrotolerans
298 2831063 2831260 - NZ_CP022121.1 Dehalobacterium formicoaceticum
299 4067654 4067848 + NZ_CP060713.1 Nocardioides mesophilus
300 530780 530977 - NZ_CP034930.1 Apibacter raozihei
301 2062646 2062840 + NZ_CP011883.2 Mycobacterium haemophilum DSM 44634
302 3065807 3066004 - NC_022571.1 Clostridium saccharobutylicum DSM 13864
303 4098634 4098828 + NZ_AP022579.1 Mycolicibacterium boenickei
304 1681550 1681744 + NZ_CP048813.1 Rhodococcus triatomae
305 2930758 2930952 - NZ_CP023147.1 Mycobacterium marseillense
306 1256613 1256807 + NC_008346.1 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311
307 6977870 6978064 + NZ_CP030073.1 Streptomyces cadmiisoli
308 74509 74703 - NC_018178.1 Melioribacter roseus P3M-2
309 2573233 2573442 - NZ_AP017378.1 Desulfovibrio ferrophilus
310 2523249 2523446 - NC_015942.1 Acidithiobacillus ferrivorans SS3
311 3701739 3701933 + NZ_CP012040.1 Cyclobacterium amurskyense
312 2141793 2141987 - NC_015671.1 Cellulomonas gilvus ATCC 13127
313 2460700 2460894 + NZ_AP018164.1 Mycobacterium shigaense
314 2871094 2871291 + NC_020291.1 Clostridium saccharoperbutylacetonicum N1-4(HMT)
315 1048391 1048585 - NZ_CP024957.1 Streptomyces cavourensis
316 2005083 2005280 - NZ_CP029187.1 Flavobacterium pallidum
317 2178386 2178580 - NZ_AP022605.1 Mycobacterium doricum
318 1650549 1650743 + NZ_AP022617.1 Mycolicibacterium monacense
319 6422870 6423064 + NZ_CP022310.1 Streptomyces calvus
320 3776360 3776557 + NZ_CP029186.1 Flavobacterium album
321 1956944 1957138 - NC_021985.1 Streptomyces collinus Tu 365
322 1751870 1752064 - NZ_CP059991.1 Streptomyces gardneri
323 3124805 3125005 - NZ_CP039543.1 Desulfovibrio marinus
324 2591326 2591523 - NZ_CP014229.1 Desulfovibrio fairfieldensis
325 3670410 3670607 - NZ_CP015249.1 Dokdonella koreensis DS-123
326 3939157 3939351 - NZ_LN831039.1 Mycolicibacterium smegmatis
327 1300431 1300625 - NZ_CP029043.1 Streptomyces nigra
328 2532794 2532988 + NZ_AP022613.1 Mycobacterium conspicuum
329 1809095 1809292 - NZ_AP018560.1 Aerosticca soli
330 1335818 1336012 - NZ_CP013738.1 Streptomyces globisporus C-1027
331 2300653 2300847 - NC_020888.1 Thalassolituus oleivorans MIL-1
332 3685775 3685972 + NZ_CP042831.1 Flavobacterium alkalisoli
333 3335044 3335238 + NZ_AP022570.1 Mycolicibacterium poriferae
334 3633807 3634004 - NZ_CP037933.1 Flavobacterium nackdongense
335 4056735 4056932 + NZ_CP020919.1 Flavobacterium kingsejongi
336 32999 33196 + NC_009441.1 Flavobacterium johnsoniae UW101
337 1133669 1133863 - NZ_CP070242.1 Streptomyces californicus
338 1115132 1115326 - NZ_CP021080.1 Streptomyces pluripotens
339 5478371 5478565 - NZ_CP051486.1 Streptomyces pratensis
340 6747600 6747794 + NZ_CP051006.1 Streptomyces griseofuscus
341 2001600 2001794 - NZ_CP071839.1 Streptomyces cyanogenus
342 6910442 6910636 + NC_010572.1 Streptomyces griseus subsp. griseus NBRC 13350
343 993237 993431 - NZ_CP017316.1 Streptomyces rubrolavendulae
344 1018298 1018492 - NZ_CP023696.1 Streptomyces fradiae ATCC 10745 = DSM 40063
345 1520320 1520517 + NZ_CP014671.1 Immundisolibacter cernigliae
346 51152 51346 - NZ_AP022562.1 Mycobacterium novum
347 1975860 1976054 + NC_015576.1 Mycolicibacter sinensis
348 5906207 5906401 + NZ_CP023692.1 Streptomyces vinaceus
349 559653 559847 - NZ_CP007519.1 Trueperella pyogenes
350 444301 444498 + NZ_CP031188.1 Flavobacterium arcticum
351 1107647 1107841 - NZ_CP020563.1 Kitasatospora albolonga
352 1837937 1838131 + NC_015635.1 Microlunatus phosphovorus NM-1
353 1272084 1272278 - NC_021177.1 Streptomyces fulvissimus DSM 40593
354 1783866 1784063 - NZ_CP038810.1 Flavobacterium sangjuense
355 1038375 1038569 - NZ_AP022587.1 Mycobacterium stomatepiae
356 1363865 1364062 + NZ_CP035704.1 Pseudolysobacter antarcticus
357 3443121 3443318 - NZ_AP021874.1 Desulfosarcina alkanivorans
358 964851 965045 + NC_018664.1 Gottschalkia acidurici 9a
359 1804958 1805152 + NZ_LR026975.1 Mycolicibacterium hassiacum DSM 44199
360 1003621 1003818 + NZ_CP064030.1 Dyella caseinilytica
361 6197673 6197867 + NC_022663.1 Mycobacterium kansasii ATCC 12478
362 1188169 1188366 + NZ_CP054012.1 Parabacteroides distasonis
363 918667 918861 + NZ_AP022590.1 Mycobacterium mantenii
364 1476110 1476307 + NC_014734.1 Paludibacter propionicigenes WB4
365 1368263 1368460 + NZ_CP030840.1 Acidisarcina polymorpha
366 478156 478350 + NZ_AP022619.1 Mycobacterium paraseoulense
367 2937500 2937697 + NC_016001.1 Flavobacterium branchiophilum FL-15
368 1369950 1370147 - NC_014377.1 Thermosediminibacter oceani DSM 16646
369 585071 585265 - NZ_CP008802.1 Actinotignum schaalii
370 1196023 1196217 + NZ_AP022582.1 Mycobacterium seoulense
371 1824664 1824858 - NZ_CP012507.1 Kocuria palustris
372 2088705 2088899 + NC_014666.1 Frankia inefficax
373 2618871 2619068 - NC_017033.1 Frateuria aurantia DSM 6220
374 2565665 2565859 + NZ_LR130759.1 Mycobacterium basiliense
375 1815594 1815785 + NZ_CP009312.1 Lawsonella clevelandensis
376 2387027 2387221 - NZ_CP071139.1 Streptomyces nojiriensis
377 1766833 1767033 - NZ_CP017237.1 Moorella thermoacetica
378 1449439 1449633 - NZ_CP072827.1 Streptomyces mobaraensis NBRC 13819 = DSM 40847
379 723190 723384 + NZ_LR134357.1 Actinomyces israelii
380 2016623 2016817 + NZ_LR134476.1 Trueperella bialowiezensis
381 2077498 2077692 - NZ_CP051884.1 Cellulomonas taurus
382 2940753 2940950 + NZ_CP017480.1 Luteibacter rhizovicinus DSM 16549
383 311573 311767 - NZ_CP011801.1 Nitrospira moscoviensis
384 1633058 1633252 + NZ_CP029543.1 Mycobacterium leprae
385 516861 517058 + NC_008554.1 Syntrophobacter fumaroxidans MPOB
386 2327876 2328076 - NZ_CP024955.1 Kyrpidia spormannii
387 2334840 2335040 - NC_014098.1 Kyrpidia tusciae DSM 2912
388 1036639 1036833 + NZ_CP066802.1 Actinomyces weissii
389 1122005 1122199 - NZ_CP020570.1 Streptomyces violaceoruber
390 858220 858417 + NZ_LR134506.1 Porphyromonas cangingivalis
391 1286620 1286814 - NZ_CP041091.1 Nocardioides sambongensis
392 2189418 2189612 - NZ_CP023690.1 Streptomyces spectabilis
393 109651 109851 - NZ_CP067016.1 Anaerococcus obesiensis
394 1387935 1388135 - NZ_CP066014.1 Anaerococcus vaginalis
395 2889651 2889845 - NZ_CP009360.4 Mycobacterium avium subsp. hominissuis
396 2048489 2048683 - NZ_CP039292.1 Actinomyces procaprae
397 1535047 1535253 - NC_006085.1 Cutibacterium acnes KPA171202
398 4953240 4953434 + NZ_CP016793.1 Lentzea guizhouensis
399 20081 20278 + NZ_CP054494.1 Flavobacterium columnare
400 3167593 3167787 - NZ_CP018099.1 Caldithrix abyssi DSM 13497
401 1883416 1883613 - NZ_CP028811.1 Flavobacterium magnum
402 1402277 1402474 + NZ_CP041046.1 Luteibacter pinisoli
403 4100746 4100940 + NZ_AP022583.1 Mycobacterium noviomagense
404 3088270 3088464 + NZ_CP044285.1 Hymenobacter baengnokdamensis
405 2168680 2168877 - NZ_CP014841.1 Dyella thiooxydans
406 902387 902581 - NZ_CP031194.1 Streptomyces paludis
407 707561 707755 - NZ_LT635457.1 Actinomyces pacaensis
408 964272 964466 - NZ_AP022576.1 Mycobacterium florentinum
409 314112 314309 - NZ_CP046027.1 Neisseria brasiliensis
410 1021698 1021892 + NZ_CP034412.1 Glutamicibacter creatinolyticus
411 38468 38662 + NZ_CP050954.1 Hymenobacter sp. BT18
412 1398064 1398258 - NZ_CP023703.1 Streptomyces galilaeus
413 3453179 3453382 - NZ_CP027860.1 Ahniella affigens
414 6873667 6873861 + NZ_CP032698.1 Streptomyces hundungensis
415 7125104 7125298 + NZ_CP026652.1 Streptomyces dengpaensis
416 1999744 1999941 - NZ_CP012621.1 Zobellella denitrificans
417 6275737 6275934 + NZ_CP042806.1 Terriglobus albidus
418 1895795 1895992 - NZ_CP035504.1 Kocuria indica
419 1155166 1155363 + NC_020541.1 Rhodanobacter denitrificans
420 2121475 2121672 + NZ_CP043046.1 Pigmentiphaga aceris
421 2202190 2202387 + NZ_CP018082.1 Nocardia mangyaensis
422 1416395 1416589 - NZ_CP023695.1 Streptomyces alboniger
423 1248407 1248604 + NZ_CP048113.1 Chitinophaga agri
424 1217141 1217335 - NZ_AP023439.1 Streptomyces tuirus
425 1006041 1006238 - NC_017025.1 Flavobacterium indicum GPTSA100-9 = DSM 17447
426 1250802 1250999 + NC_007484.1 Nitrosococcus oceani ATCC 19707
427 352485 352682 - NC_017856.1 Methylophaga frappieri
428 1923989 1924186 - NZ_CP009302.1 Berryella intestinalis
429 1536296 1536490 - NZ_CP040752.1 Streptomyces rectiverticillatus
430 808004 808198 + NZ_CP044344.1 Nocardioides cynanchi
431 7679105 7679299 + NZ_AP023440.1 Streptomyces glomeroaurantiacus
432 1225623 1225820 - NZ_LT635455.1 Olsenella timonensis
433 354396 354599 - NC_016024.1 Chloracidobacterium thermophilum B
434 1899959 1900153 - NZ_CP027306.1 Streptomyces atratus
435 2192478 2192672 + NZ_CP014228.1 Actinomyces radicidentis
436 280855 281052 + NZ_CP035810.1 Brevibacterium luteolum
437 962513 962707 - NZ_CP066065.1 Schaalia meyeri
438 1563685 1563879 - NZ_CP063374.1 Streptomyces chromofuscus
439 1929313 1929507 - NZ_CP023694.1 Streptomyces coeruleorubidus
440 1486631 1486825 - NZ_CP053642.1 Actinomyces marmotae
441 8055065 8055259 + NC_003155.5 Streptomyces avermitilis MA-4680 = NBRC 14893
442 1736382 1736576 - NZ_CP022685.1 Streptomyces formicae
443 3194614 3194808 + NZ_CP063373.1 Streptomyces ferrugineus
444 8181451 8181645 + NZ_CP023699.1 Streptomyces kanamyceticus
445 3896276 3896473 - NC_015064.1 Granulicella tundricola MP5ACTX9
446 3088522 3088722 - NZ_CP033433.1 Cohnella candidum
447 1331533 1331733 - NC_011661.1 Dictyoglomus turgidum DSM 6724
448 3619380 3619577 - NZ_CP023777.1 Chitinophaga caeni
449 2777394 2777588 - NZ_CP029146.1 Rhodococcus ruber
450 2642356 2642550 - NZ_CP031455.1 Streptomyces olivoreticuli subsp. olivoreticuli
451 1848341 1848541 + NZ_AP019400.1 Cohnella abietis
452 4723932 4724129 - NC_013132.1 Chitinophaga pinensis DSM 2588
453 7402662 7402856 + NZ_CP045643.1 Streptomyces fagopyri
454 1327191 1327388 + NC_008148.1 Rubrobacter xylanophilus DSM 9941
455 1785330 1785524 - NZ_CP021978.1 Streptomyces hawaiiensis
456 3224245 3224442 + NZ_CP040098.1 Desulfoglaeba alkanexedens ALDC
457 7066284 7066478 + NZ_CP034687.1 Streptomyces griseoviridis
458 5937759 5937953 + NC_020990.1 Streptomyces albidoflavus
459 6288603 6288797 + NZ_CP031742.1 Streptomyces koyangensis
460 1620260 1620457 + NZ_CP046670.1 Alteromonas mediterranea
461 1751115 1751312 - NZ_CP014322.1 Alteromonas addita
462 2393658 2393855 - NC_015554.1 Alteromonas naphthalenivorans
463 1279362 1279556 + NZ_CP023564.1 Brachybacterium ginsengisoli
464 1151112 1151312 - NC_011297.1 Dictyoglomus thermophilum H-6-12
465 1845152 1845346 - NZ_CP031356.1 Brachybacterium saurashtrense
466 1675562 1675759 + NZ_CP017477.1 Polaribacter vadi
467 2510039 2510239 + NZ_CP063849.1 Paludibaculum fermentans
468 3822834 3823028 + NC_009664.2 Kineococcus radiotolerans SRS30216 = ATCC BAA-149
469 3193074 3193268 + NZ_CP015079.1 Nocardioides dokdonensis FR1436
470 3208730 3208924 - NZ_CP068551.1 Pseudomonas khazarica
471 278921 279127 - NZ_CP040635.1 Acidipropionibacterium jensenii
472 2002525 2002722 - NZ_LR590481.1 Hathewaya histolytica
473 1430892 1431086 + NC_013530.1 Xylanimonas cellulosilytica DSM 15894
474 907228 907422 + NZ_CP066060.1 Actinomyces oris
475 1770532 1770726 + NZ_CP023563.1 Brachybacterium vulturis
476 2431404 2431598 + NZ_CP022295.1 Nocardioides aromaticivorans
477 16768 16962 - NZ_CP041146.1 Nocardioides humi
478 701697 701903 - NC_013501.1 Rhodothermus marinus DSM 4252
479 3323452 3323649 - NZ_CP037755.1 Pseudocnuella soli
480 3185062 3185256 - NC_013757.1 Geodermatophilus obscurus DSM 43160
481 2181821 2182018 - NZ_CP016268.1 Woeseia oceani
482 1246454 1246648 - NZ_CP060404.1 Streptomyces buecherae
483 1486056 1486253 + NZ_CP015067.2 Elizabethkingia anophelis
484 1086800 1086997 - NZ_CP014337.1 Elizabethkingia bruuniana
485 3982954 3983151 - NZ_CP007128.1 Gemmatirosa kalamazoonesis
486 740093 740287 - NZ_CP022316.1 Brachybacterium avium
487 347939 348133 - NZ_CP066049.1 Actinomyces naeslundii
488 1161594 1161788 - NZ_LR134477.1 Actinomyces viscosus
489 2076796 2076990 - NC_014246.1 Mobiluncus curtisii ATCC 43063
490 605500 605700 + NC_013203.1 Lancefieldella parvulum DSM 20469
491 865286 865480 + NZ_CP020468.1 Actinomyces gaoshouyii
492 3547497 3547697 + NZ_CP048429.1 Paenibacillus jilunlii
493 1643072 1643272 + NZ_CP009287.1 Paenibacillus graminis
494 1786973 1787173 + NZ_LN831776.1 Paenibacillus riograndensis SBR5
495 675779 675976 + NC_013170.1 Cryptobacterium curtum DSM 15641
496 2223799 2223996 - NC_014844.1 Pseudodesulfovibrio aespoeensis Aspo-2
497 1272365 1272559 - NC_002971.4 Coxiella burnetii RSA 493
498 5564792 5564992 + NZ_CP054614.1 Paenibacillus barcinonensis
499 2675909 2676103 + NZ_AP019307.1 Nocardioides baekrokdamisoli
500 5904994 5905188 - NC_009142.1 Saccharopolyspora erythraea NRRL 2338
501 2235433 2235627 + NZ_AP014862.1 Pseudomonas furukawaii
502 980636 980830 - NZ_CP014209.1 Isoptericola dokdonensis DS-3
503 1185425 1185619 - NZ_CP031146.1 Pseudomonas plecoglossicida
504 3434173 3434367 - NZ_CP024159.1 Pseudomonas mosselii
505 2050082 2050276 + NC_008027.1 Pseudomonas entomophila L48
506 2183309 2183503 + NC_021505.1 Pseudomonas putida NBRC 14164
507 3530107 3530301 + NZ_CP038436.1 Nocardioides seonyuensis
508 618930 619124 + NZ_CP035495.1 Xylanimonas allomyrinae
509 1448176 1448370 + NC_015588.1 Isoptericola variabilis 225
510 1272716 1272910 + NZ_CP009365.1 Pseudomonas soli
511 893027 893224 + NZ_CP007452.1 Peptoclostridium acidaminophilum DSM 3953
512 823136 823330 - NZ_LR134350.1 Actinomyces howellii
513 3611920 3612114 - NZ_CP022562.1 Pseudomonas monteilii
514 2431898 2432092 - NZ_LR215729.2 Pseudomonas marincola
515 2328034 2328231 - NZ_CP011454.1 Gemmatimonas phototrophica
516 2146199 2146399 + NZ_CP013023.1 Paenibacillus bovis
517 2611168 2611362 - NZ_LR134363.1 Actinomyces slackii
518 2465943 2466137 - NC_013172.1 Brachybacterium faecium DSM 4810
519 3748812 3749006 - NZ_CP071706.1 Pseudomonas donghuensis
520 597797 597991 - NZ_CP038267.1 Nocardioides euryhalodurans
521 271907 272104 + NC_018020.1 Turneriella parva DSM 21527
522 4968922 4969122 + NZ_CP045295.1 Paenibacillus cellulositrophicus
523 953804 953989 - NZ_AP019551.1 Athalassotoga saccharophila
524 2462106 2462306 + NZ_CP029353.1 Azospirillum thermophilum
525 1724751 1724945 + NZ_CP045529.1 Luteimicrobium xylanilyticum
526 1737955 1738149 - NZ_CP025227.1 Actinomyces wuliandei
527 280844 281041 + NC_018013.1 Aequorivita sublithincola DSM 14238
528 2196274 2196471 - NC_012489.1 Gemmatimonas aurantiaca T-27
529 2740881 2741078 - NZ_CP013355.1 Lutibacter profundi
530 1766096 1766293 - NC_013124.1 Acidimicrobium ferrooxidans DSM 10331
531 4512744 4512938 - NZ_CP048878.1 Spartinivicinus ruber
532 1418256 1418450 - NC_007503.1 Carboxydothermus hydrogenoformans Z-2901
533 2472260 2472457 - NC_015687.1 Clostridium acetobutylicum DSM 1731
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NC_008576.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00453.20 1.0 531 54 same-strand Ribosomal protein L20
2 PF00707.24 0.85 452 71 same-strand Translation initiation factor IF-3, C-terminal domain
++ More..