ProsmORF-pred
Result : B7J5H6
Protein Information
Information Type Description
Protein name 30S ribosomal protein S20
NCBI Accession ID CP001219.1
Organism Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270))
Left 1941815
Right 1942090
Strand -
Nucleotide Sequence TTGGCCAATACAGCTCAGGCGCGCAAGCGCGTATTACAAAATGAAAAGCGGCGCCTGCATAATGCCAGCCTGCGGTCGCGCTTGCGCACCTATGTGAAGGGTGTGCTGAAGGCCGTACATGTCGGTGATCAAGAGCAGGCACGCAGCGCACTGCGCGCCGCGGAGTCGGTCATCGACAAGACGGTTGGCAAGGGCGTGGCGCATCGCAACATGGCAGCCCGCACCAAGAGCCGGCTCTCGGCTCGTGTCAAGGCGATGGGTAACGCCGCCCAGTAA
Sequence MANTAQARKRVLQNEKRRLHNASLRSRLRTYVKGVLKAVHVGDQEQARSALRAAESVIDKTVGKGVAHRNMAARTKSRLSARVKAMGNAAQ
Source of smORF Swiss-Prot
Function Binds directly to 16S ribosomal RNA. {ECO:0000255|HAMAP-Rule:MF_00500}.
Pubmed ID 19077236
Domain CDD:412349
Functional Category Ribosomal_protein
Uniprot ID B7J5H6
ORF Length (Amino Acid) 91
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 474
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 318061 318336 - NZ_AP018795.1 Acidithiobacillus ferridurans
2 1941815 1942090 - NC_011761.1 Acidithiobacillus ferrooxidans ATCC 23270
3 1226943 1227218 + NC_015942.1 Acidithiobacillus ferrivorans SS3
4 1958534 1958812 - NZ_CP045571.1 Acidithiobacillus thiooxidans ATCC 19377
5 1610795 1611070 - NZ_CP026328.2 Acidithiobacillus caldus
6 3732939 3733217 - NZ_AP017928.1 Methylocaldum marinum
7 4810497 4810775 + NZ_CP015839.1 Marinobacterium aestuarii
8 567675 567941 - NZ_CP038254.1 Legionella israelensis
9 3127138 3127398 - NZ_CP013816.1 Piscirickettsia salmonis
10 4112192 4112467 + NC_012560.1 Azotobacter vinelandii DJ
11 3191131 3191397 - NZ_AP022853.1 Sulfurimicrobium lacus
12 5112663 5112938 + NC_002516.2 Pseudomonas aeruginosa PAO1
13 2439112 2439390 - NC_002977.6 Methylococcus capsulatus str. Bath
14 1608440 1608706 - NZ_CP014143.1 Microbulbifer aggregans
15 1320348 1320614 + NZ_LR134374.1 Legionella spiritensis
16 160647 160916 - NC_019902.2 Thioalkalivibrio nitratireducens DSM 14787
17 491677 491961 - NZ_LR699119.1 Aquicella siphonis
18 4134012 4134290 + NZ_CP060009.1 Pseudomonas sediminis
19 3962818 3963096 + NZ_CP013124.1 Pseudomonas mendocina S5.2
20 3440475 3440753 - NZ_CP070505.1 Pseudomonas toyotomiensis
21 1096640 1096918 - NZ_CP068551.1 Pseudomonas khazarica
22 4045505 4045768 - NC_005085.1 Chromobacterium violaceum ATCC 12472
23 2924346 2924609 + NZ_CP014476.1 Methylomonas denitrificans
24 1699864 1700148 + NZ_LR699114.1 Aquicella lusitana
25 3450447 3450713 + NZ_CP019650.1 Microbulbifer agarilyticus
26 5060038 5060307 + NZ_CP047698.1 Pseudomonas knackmussii
27 6110681 6110950 + NZ_CP048833.1 Pseudomonas multiresinivorans
28 1098386 1098655 - NZ_CP014158.1 Pseudomonas citronellolis
29 2762138 2762404 + NZ_CP025491.2 Legionella sainthelensi
30 882402 882677 - NZ_CP043311.1 Pseudomonas lalkuanensis
31 1558355 1558618 - NZ_AP018738.1 Ferriphaselus amnicola
32 762260 762523 - NZ_CP029495.1 Chromobacterium phragmitis
33 2808282 2808545 - NZ_CP043473.1 Chromobacterium paludis
34 1647887 1648165 + NZ_CP045302.1 Azotobacter salinestris
35 190553 190822 - NZ_CP007029.1 Thioalkalivibrio paradoxus ARh 1
36 664176 664439 + NZ_CP035033.1 Hydrogenovibrio thermophilus
37 4274207 4274470 + NZ_CP035467.1 Methylotuvimicrobium buryatense
38 474695 474958 + NZ_CP043929.1 Methylomonas rhizoryzae
39 1033306 1033569 - NZ_CP031252.1 Neisseria elongata
40 3538327 3538605 + NZ_CP011835.1 Azotobacter chroococcum
41 3645410 3645679 + NZ_CP020931.1 Marinobacter salarius
42 1146846 1147121 - NZ_AP022642.1 Pseudomonas otitidis
43 922920 923195 - NZ_AP014862.1 Pseudomonas furukawaii
44 532942 533214 - NZ_CP014544.1 Zhongshania aliphaticivorans
45 2055426 2055689 - NZ_CP017707.1 Chromobacterium vaccinii
46 1142977 1143240 - NZ_CP059563.1 Conchiformibius steedae
47 71029 71292 + NC_013960.1 Nitrosococcus halophilus Nc 4
48 835080 835343 + NZ_CP059569.1 Kingella oralis
49 3313742 3314008 + NZ_LT906442.1 Legionella waltersii
50 773214 773477 - NZ_CP038033.1 Nitrosococcus wardiae
51 3947827 3948093 + NC_011566.1 Shewanella piezotolerans WP3
52 4142364 4142627 + NC_016112.1 Methylotuvimicrobium alcaliphilum 20Z
53 967861 968127 - NZ_CP047491.1 Microbulbifer hydrolyticus
54 1700030 1700296 - NZ_CP007501.1 Polynucleobacter duraquae
55 3106612 3106878 + NC_013861.1 Legionella longbeachae NSW150
56 1128681 1128947 + NZ_CP041335.1 Chitinolyticbacter meiyuanensis
57 1163557 1163823 - NZ_CP022358.1 Shewanella bicestrii
58 508805 509068 - NZ_CP046027.1 Neisseria brasiliensis
59 2730849 2731115 + NZ_CP014782.1 Shewanella psychrophila
60 1968675 1968947 + NZ_CP053708.1 Lichenicola cladoniae
61 2988497 2988763 + NZ_CP013742.1 Legionella pneumophila
62 3135340 3135606 + NZ_CP022272.1 Shewanella marisflavi
63 1263964 1264230 - NC_009092.1 Shewanella loihica PV-4
64 1769242 1769505 - NC_008344.1 Nitrosomonas eutropha C91
65 1250782 1251045 - NZ_LS483369.1 Neisseria cinerea
66 737592 737855 + NZ_AP019312.1 Chromobacterium haemolyticum
67 2083487 2083762 - NZ_CP012362.1 Oblitimonas alkaliphila
68 1389445 1389708 - NZ_CP021520.1 Neisseria meningitidis
69 479502 479765 - NZ_CP012028.1 Neisseria gonorrhoeae
70 1451128 1451391 + NZ_CP039887.1 Neisseria subflava
71 45986 46249 - NZ_CP039886.1 Neisseria flavescens
72 1507473 1507736 + NZ_CP031699.1 Neisseria animalis
73 1752659 1752922 - NZ_CP072524.1 Neisseria sicca
74 1167365 1167631 - NC_014012.1 Shewanella violacea DSS12
75 1294810 1295076 - NC_007912.1 Saccharophagus degradans 2-40
76 1859903 1860166 + NZ_CP022278.1 Neisseria chenwenguii
77 1180625 1180888 + NZ_CP019448.1 Simonsiella muelleri ATCC 29453
78 1272477 1272740 - NZ_LR134516.1 Neisseria animaloris
79 2993584 2993850 - NZ_CP043420.1 Kushneria phosphatilytica
80 2540394 2540657 - NC_004757.1 Nitrosomonas europaea ATCC 19718
81 5045984 5046250 + NZ_CP020038.1 Agarilytica rhodophyticola
82 2721981 2722253 - NZ_CP072793.1 Thiothrix unzii
83 1699174 1699440 + NZ_CP048711.1 Kineobactrum salinum
84 1699818 1700078 + NZ_CP021376.1 Oceanisphaera avium
85 3689277 3689540 - NZ_CP036200.1 Shewanella maritima
86 1475231 1475497 - NZ_CP046378.1 Shewanella algae
87 2199208 2199471 - NZ_LR134313.1 Neisseria canis
88 519428 519694 - NZ_CP020373.1 Shewanella khirikhana
89 3669740 3670003 + NC_015572.1 Methylomonas methanica MC09
90 2854017 2854283 + NZ_LN614827.1 Legionella fallonii LLAP-10
91 987253 987519 - NZ_CP069213.1 Shewanella litorisediminis
92 1113292 1113558 - NC_008700.1 Shewanella amazonensis SB2B
93 1366924 1367190 - NC_016901.1 Shewanella baltica OS678
94 5743428 5743706 + NZ_CP035088.1 Pseudomonas viciae
95 2274435 2274698 - NZ_AP019755.1 Nitrosomonas stercoris
96 4460432 4460692 + NZ_CP028897.1 Dongshaea marina
97 1021977 1022249 - NZ_CP070503.1 Pseudomonas atacamensis
98 5612968 5613240 + NZ_CP062253.1 Pseudomonas gozinkensis
99 5634456 5634728 + NZ_CP062252.1 Pseudomonas allokribbensis
100 1454711 1454974 + NZ_CP031325.1 Neisseria polysaccharea
101 5805019 5805297 + NZ_CP034725.1 Pseudomonas brassicacearum
102 1313214 1313480 - NZ_CP030086.1 Polynucleobacter paneuropaeus
103 5155333 5155611 - NZ_CP048810.1 Pseudomonas bijieensis
104 1236540 1236803 - NZ_AP018558.1 Hydrogenophilus thermoluteolus
105 2832546 2832809 + NZ_CP060414.1 Neisseria musculi
106 849147 849425 - NZ_CP027723.1 Pseudomonas orientalis
107 538704 538967 - NC_012969.1 Methylovorus glucosetrophus SIP3-4
108 851632 851910 - NZ_CP010896.1 Pseudomonas simiae
109 869240 869518 - NZ_CP027756.1 Pseudomonas synxantha
110 1069994 1070272 - NZ_CP054205.1 Pseudomonas rhodesiae
111 870204 870482 - NZ_CP023272.1 Pseudomonas lurida
112 812558 812824 + NZ_CP014646.1 Thauera humireducens
113 3359924 3360184 - NC_011901.1 Thioalkalivibrio sulfidiphilus HL-EbGr7
114 822170 822433 + NZ_LT906434.1 Neisseria zoodegmatis
115 2001777 2002040 + NZ_LR134533.1 Neisseria weaveri
116 2563711 2563974 + NZ_CP068345.1 Succinivibrio dextrinosolvens
117 1877923 1878186 + NZ_CP059565.1 Neisseria wadsworthii
118 2176283 2176549 + NZ_LT906451.1 Legionella lansingensis
119 3484983 3485243 - NZ_CP020465.1 Cognaticolwellia beringensis
120 2018869 2019132 - NZ_AP020335.1 Hydrogenovibrio marinus
121 1417753 1418019 - NC_009831.1 Shewanella sediminis HAW-EB3
122 1273916 1274182 - NZ_CP031222.1 Aquirhabdus parva
123 992228 992494 - NZ_LN614830.1 Tatlockia micdadei
124 328065 328328 - NZ_CP039731.1 Aquitalea aquatilis
125 629588 629851 + NZ_CP047241.1 Aquitalea denitrificans
126 1206290 1206556 - NZ_CP041036.1 Shewanella polaris
127 1935308 1935574 + NC_018868.3 Simiduia agarivorans SA1 = DSM 21679
128 1125487 1125753 - NZ_AP014936.1 Sulfurifustis variabilis
129 2618986 2619264 + NZ_CP014262.1 Pseudomonas corrugata
130 4137304 4137573 + NC_018691.1 Alcanivorax dieselolei B5
131 2183581 2183847 - NZ_CP012808.1 Acinetobacter equi
132 2264508 2264771 - NZ_AP021889.1 Thiosulfatimonas sediminis
133 5963042 5963320 + NZ_CP051487.1 Pseudomonas umsongensis
134 2363698 2363961 + NC_007947.1 Methylobacillus flagellatus KT
135 4388739 4389017 - NZ_CP009533.1 Pseudomonas rhizosphaerae
136 1584102 1584368 + NZ_CP041970.1 Acinetobacter dispersus
137 643016 643279 - NZ_CP051652.1 Pectobacterium carotovorum
138 4238004 4238267 + NZ_CP034938.1 Pectobacterium odoriferum
139 660501 660761 - NZ_AP018724.1 Sulfurivermis fontis
140 4044862 4045137 + NZ_LR215729.2 Pseudomonas marincola
141 2834776 2835045 + NZ_CP011367.1 Thioalkalivibrio versutus
142 1105397 1105657 - NZ_AP012273.1 Thiolapillus brandeum
143 2000778 2001044 + NZ_CP024632.1 Acinetobacter junii
144 1569695 1569961 - NZ_CP030880.1 Acinetobacter haemolyticus
145 1130472 1130738 - NZ_CP023559.1 Salinicola tamaricis
146 2121038 2121301 + NZ_CP059571.1 Neisseria bacilliformis
147 1396523 1396783 + NZ_CP034759.1 Litorilituus sediminis
148 2345633 2345893 - NZ_CP021377.1 Oceanisphaera profunda
149 2717131 2717397 + NZ_CP018839.1 Thauera chlorobenzoica
150 2077057 2077323 + NZ_CP021323.1 Kushneria konosiri
151 1128288 1128554 - NZ_CP021358.1 Kushneria marisflavi
152 306332 306598 + NZ_CP040105.1 Acinetobacter nosocomialis M2
153 2026682 2026948 + NZ_CP015121.1 Acinetobacter baumannii
154 1790002 1790268 + NZ_CP028339.1 Thauera aromatica K172
155 1561978 1562241 - NZ_CP031253.1 Neisseria lactamica
156 1654918 1655181 + NZ_CP059564.1 Alysiella filiformis
157 3971620 3971886 + NZ_CP037952.1 Parashewanella spongiae
158 162961 163227 + NZ_LR134418.1 Legionella adelaidensis
159 2088673 2088936 - NZ_CP059567.1 Neisseria shayeganii
160 4166518 4166796 - NZ_CP031146.1 Pseudomonas plecoglossicida
161 4994186 4994464 + NC_008027.1 Pseudomonas entomophila L48
162 773942 774220 - NZ_CP022562.1 Pseudomonas monteilii
163 5264481 5264759 + NC_021505.1 Pseudomonas putida NBRC 14164
164 4844654 4844932 - NZ_CP005960.1 Pseudomonas mandelii JR-1
165 731570 731848 - NZ_CP014870.1 Pseudomonas silesiensis
166 2469598 2469864 - NZ_CP016210.1 Azoarcus olearius
167 773988 774266 - NZ_CP041352.1 Casimicrobium huifangae
168 1270098 1270364 - NZ_CP045650.1 Acinetobacter wanghuae
169 752372 752635 + NZ_AP021881.1 Sulfuriferula nivalis
170 2268944 2269210 + NZ_CP013189.1 Pseudohongiella spirulinae
171 2936426 2936689 - NC_019940.1 Thioflavicoccus mobilis 8321
172 5548727 5549002 + NZ_CP056030.1 Pseudomonas eucalypticola
173 542444 542707 + NZ_AP018721.1 Sulfuritortus calidifontis
174 2811047 2811310 - NZ_CP021106.3 Nitrosospira lacus
175 1621223 1621489 + NZ_CP068285.1 Ralstonia syzygii subsp. celebesensis
176 926571 926849 - NZ_CP046621.1 Pseudomonas alkylphenolica
177 549268 549540 - NZ_CP011568.3 Pandoraea thiooxydans
178 3623246 3623509 - NZ_CP011451.1 Nitrosomonas communis
179 2052151 2052417 + NZ_CP035934.2 Acinetobacter cumulans
180 4935367 4935645 + NZ_CP071706.1 Pseudomonas donghuensis
181 3674017 3674280 + NZ_CP041730.1 Chitinimonas arctica
182 2014856 2015119 - NZ_CP031700.1 Neisseria zalophi
183 707910 708173 - NC_015567.1 Serratia plymuthica AS9
184 1826434 1826700 - NC_009379.1 Polynucleobacter asymbioticus QLW-P1DMWA-1
185 2392296 2392562 - NZ_CP022579.1 Oryzomicrobium terrae
186 999323 999586 - NC_013959.1 Sideroxydans lithotrophicus ES-1
187 1204810 1205070 - NC_003910.7 Colwellia psychrerythraea 34H
188 1724792 1725061 - NZ_CP071766.1 Acinetobacter towneri
189 3726558 3726821 + NZ_CP010855.1 Marinovum algicola DG 898
190 3224842 3225102 - NZ_CP011412.1 Sedimenticola thiotaurini
191 2293442 2293708 + NC_014259.1 Acinetobacter oleivorans DR1
192 4875535 4875813 + NZ_CP024159.1 Pseudomonas mosselii
193 4049871 4050149 + NZ_CP009365.1 Pseudomonas soli
194 3298532 3298795 - NZ_CP013341.1 Nitrosomonas ureae
195 10276 10539 - NZ_CP013341.1 Nitrosomonas ureae
196 1115758 1116051 - NZ_CP029210.1 Aquabacterium olei
197 1038772 1039038 - NC_016603.1 Acinetobacter pittii PHEA-2
198 2177740 2178006 + NZ_CP053391.1 Acinetobacter lactucae
199 2286264 2286530 + NZ_CP065820.1 Acinetobacter seifertii
200 3857928 3858191 + NZ_CP034348.1 Roseovarius faecimaris
201 1384664 1384933 - NC_005966.1 Acinetobacter baylyi ADP1
202 588131 588394 + NZ_CP007031.1 Marichromatium purpuratum 984
203 336208 336474 - NZ_CP060084.1 Teredinibacter haidensis
204 847902 848168 - NZ_LN681225.1 Legionella hackeliae
205 652635 652913 - NZ_CP012400.2 Pseudomonas yamanorum
206 156847 157113 + NZ_CP070518.1 Acinetobacter calcoaceticus
207 760101 760373 - NZ_CP031124.1 Ephemeroptericola cinctiostellae
208 1060221 1060487 + NC_014147.1 Moraxella catarrhalis BBH18
209 744080 744358 - NZ_CP042804.1 Pseudomonas amygdali pv. tabaci str. ATCC 11528
210 1950869 1951132 - NZ_AP021888.1 Thiosulfativibrio zosterae
211 1419732 1419992 - NZ_CP036536.1 Salinimonas lutimaris
212 3742110 3742373 + NZ_CP016171.1 Bordetella bronchialis
213 1711375 1711641 - NZ_CP029331.1 Thauera hydrothermalis
214 1662288 1662554 - NZ_CP023276.1 Polynucleobacter difficilis
215 1766890 1767156 + NZ_CP041783.1 Shewanella donghaensis
216 942552 942812 - NZ_CP025120.1 Kangiella profundi
217 867260 867538 - NC_004578.1 Pseudomonas syringae pv. tomato str. DC3000
218 1193961 1194227 - NZ_LT615228.1 Polynucleobacter necessarius
219 925332 925610 - NZ_CP018420.1 Pseudomonas veronii
220 630571 630837 - NZ_CP014864.1 Microbulbifer thermotolerans
221 829951 830229 - NZ_CP067022.1 Pseudomonas cannabina pv. alisalensis
222 838924 839202 - NZ_CP068034.2 Pseudomonas syringae
223 2160855 2161118 + NC_014394.1 Gallionella capsiferriformans ES-2
224 3680337 3680606 + NZ_LN606600.1 Acetobacter senegalensis
225 1500196 1500462 - NZ_CP020472.1 Shewanella japonica
226 933961 934224 + NC_016043.1 Taylorella asinigenitalis MCE3
227 2262360 2262626 + NZ_CP016895.1 Acinetobacter larvae
228 560947 561210 - NC_012968.1 Methylotenera mobilis JLW8
229 808039 808311 - NZ_CP021060.1 Taylorella equigenitalis
230 1491954 1492217 + NZ_AP021884.1 Sulfuriferula plumbiphila
231 2162619 2162888 + NZ_CP038141.1 Swingsia samuiensis
232 1765791 1766060 - NC_014758.1 Calditerrivibrio nitroreducens DSM 19672
233 1687440 1687709 + NZ_CP044483.1 Acinetobacter schindleri
234 5413544 5413816 + NZ_CP029608.1 Pseudomonas kribbensis
235 5778002 5778274 + NZ_CP014205.2 Pseudomonas glycinae
236 2218220 2218483 + NC_022357.1 Sulfuricella denitrificans skB26
237 2633498 2633764 - NZ_CP054626.1 Cupriavidus gilardii
238 2238589 2238852 - NZ_CP016172.1 Bordetella flabilis
239 604313 604573 - NZ_CP031416.1 Gallaecimonas mangrovi
240 5124912 5125190 + NZ_CP007039.1 Pseudomonas cichorii JBC1
241 526729 526995 + NC_007963.1 Chromohalobacter salexigens DSM 3043
242 2404683 2404949 + NZ_CP016397.1 Legionella clemsonensis
243 1307577 1307843 - NC_009901.1 Shewanella pealeana ATCC 700345
244 1370832 1371098 - NC_010334.1 Shewanella halifaxensis HAW-EB4
245 3898708 3898974 + NZ_CP024899.1 Rhodobaca barguzinensis
246 2731709 2731969 - NZ_LR778301.1 Denitratisoma oestradiolicum
247 5911837 5912115 + NZ_LS999205.1 Pseudomonas protegens CHA0
248 2681383 2681652 - NZ_CP062147.1 Komagataeibacter hansenii
249 3538956 3539219 - NZ_CP052766.1 Alteromonas pelagimontana
250 4039970 4040233 + NZ_CP065915.1 Pelagovum pacificum
251 3890778 3891041 + NZ_CP054599.1 Sulfitobacter pseudonitzschiae
252 2476221 2476493 + NZ_CP046913.1 Paraburkholderia acidisoli
253 1791286 1791552 + NZ_CP064781.1 Azospira restricta
254 1537867 1538127 + NZ_CP012418.1 Kangiella sediminilitoris
255 3517905 3518180 + NZ_CP002580.1 Burkholderia plantarii
256 3265422 3265688 + NC_007954.1 Shewanella denitrificans OS217
257 1524079 1524339 + NZ_CP010975.1 Kangiella geojedonensis
258 2499550 2499813 + NZ_HG916765.1 Castellaniella defragrans 65Phen
259 564280 564546 - NZ_CP059467.1 Aromatoleum bremense
260 2357432 2357698 - NZ_CP025682.1 Azoarcus pumilus
261 3019357 3019623 + NC_006513.1 Aromatoleum aromaticum EbN1
262 2015447 2015713 + NC_008789.1 Halorhodospira halophila SL1
263 2026883 2027149 + NZ_CP018139.1 Halomonas aestuarii
264 3316058 3316324 - NZ_CP039287.1 Cupriavidus necator H16
265 1637522 1637797 + NZ_CP035900.1 Burkholderia glumae
266 3727679 3727945 - NZ_CP062803.1 Cupriavidus basilensis
267 965730 965993 - NC_015554.1 Alteromonas naphthalenivorans
268 2983972 2984232 + NZ_CP031769.1 Salinimonas sediminis
269 3923714 3923980 - NZ_CP017754.1 Cupriavidus malaysiensis
270 3307983 3308249 + NZ_CP021404.1 Pacificitalea manganoxidans
271 1355685 1355951 - NZ_LR134343.1 Moraxella cuniculi
272 3921812 3922078 + NZ_CP059560.1 Aromatoleum petrolei
273 3851284 3851547 - NZ_CP044060.1 Aeromonas veronii
274 4100734 4100997 - NZ_CP065745.1 Aeromonas allosaccharophila
275 4131196 4131459 + NZ_AP022188.1 Aeromonas media
276 578803 579075 - NZ_CP009795.1 Burkholderia dolosa AU0158
277 2835229 2835501 + NZ_CP013398.1 Burkholderia seminalis
278 2903393 2903665 + NZ_CP013401.1 Burkholderia metallica
279 2908985 2909257 + NZ_CP013450.1 Burkholderia cenocepacia
280 2977256 2977528 + NZ_CP045235.1 Burkholderia cepacia
281 717250 717513 - NZ_CP050851.1 Aeromonas hydrophila
282 3049557 3049829 + NZ_CP013459.1 Burkholderia stagnalis
283 3003529 3003801 + NZ_CP020737.1 Paraburkholderia acidophila
284 3221831 3222103 + NZ_CP013414.1 Burkholderia ubonensis
285 3138214 3138477 + NZ_CP014322.1 Alteromonas addita
286 1633070 1633336 - NC_010506.1 Shewanella woodyi ATCC 51908
287 3279396 3279659 + NZ_CP043869.1 Neptunomonas concharum
288 5892677 5892955 + NZ_CP061079.1 Pseudomonas chlororaphis
289 3218810 3219046 + NC_008825.1 Methylibium petroleiphilum PM1
290 1249222 1249494 - NZ_CP013481.2 Pandoraea apista
291 4042916 4043182 + NZ_CP053562.1 Thioclava electrotropha
292 1806488 1806748 + NC_013166.1 Kangiella koreensis DSM 16069
293 3186070 3186348 + NZ_CP009727.1 Burkholderia mallei
294 844833 845111 - NC_007651.1 Burkholderia thailandensis E264
295 836062 836340 + NZ_CP008781.1 Burkholderia pseudomallei
296 2782859 2783122 + NZ_CP051883.1 Aeromonas salmonicida
297 3910288 3910554 + NZ_CP019437.1 Thioclava nitratireducens
298 3636351 3636614 + NC_015559.1 Marinomonas posidonica IVIA-Po-181
299 2686805 2687038 + NZ_CP022423.1 Vitreoscilla filiformis
300 365648 365914 + NC_014532.2 Halomonas elongata DSM 2581
301 2202286 2202552 - NZ_AP014630.1 Acinetobacter guillouiae
302 677392 677661 - NZ_CP004387.1 Alcanivorax pacificus W11-5
303 3105233 3105502 + NZ_CP036404.1 Komagataeibacter saccharivorans
304 2534619 2534882 - NZ_CP039268.1 Thermochromatium tepidum ATCC 43061
305 3469740 3470000 - NZ_CP017415.1 Acidihalobacter yilgarnenesis
306 3433246 3433509 - NC_007484.1 Nitrosococcus oceani ATCC 19707
307 2871758 2872030 + NZ_CP009832.1 Burkholderia multivorans ATCC BAA-247
308 2602530 2602796 + NC_017964.1 Advenella kashmirensis WT001
309 1195448 1195717 - NZ_CP042808.1 Acetobacter oryzoeni
310 1976 2245 - NC_021991.1 Acetobacter pasteurianus 386B
311 851534 851803 - NZ_CP015164.1 Acetobacter ascendens
312 1325514 1325783 - NZ_CP022374.1 Acetobacter oryzifermentans
313 3004534 3004806 + NC_007510.1 Burkholderia lata
314 2195566 2195826 + NZ_CP046415.1 Guyparkeria halophila
315 602234 602506 + NZ_CP011503.1 Burkholderia pyrrocinia
316 996999 997268 - NZ_CP011381.2 Moraxella bovoculi
317 1563622 1563885 - NC_015581.1 Thiomicrospira cyclica ALM1
318 3056602 3056871 + NZ_CP019875.1 Komagataeibacter nataicola
319 1199385 1199648 + NC_007614.1 Nitrosospira multiformis ATCC 25196
320 1097190 1097459 + NZ_CP050139.1 Komagataeibacter rhaeticus
321 538637 538903 + NZ_LR884459.1 Psychrobacter arenosus
322 5024281 5024553 + NZ_CP013480.3 Pandoraea norimbergensis
323 4958350 4958616 + NZ_CP048878.1 Spartinivicinus ruber
324 896833 897096 - NZ_AP018786.1 Sutterella megalosphaeroides
325 2329948 2330214 - NZ_CP019343.1 Oceanicoccus sagamiensis
326 3136309 3136578 + NC_016027.1 Komagataeibacter medellinensis NBRC 3288
327 923762 924028 - NZ_CP048812.1 Halomonas socia
328 1310295 1310561 - NZ_CP037951.1 Parashewanella tropica
329 1055312 1055581 - NZ_CP011158.1 Moraxella ovis
330 352870 353133 + NZ_CP018632.1 Granulosicoccus antarcticus IMCC3135
331 578357 578620 + NZ_CP054020.1 Thiomicrorhabdus xiamenensis
332 1282629 1282892 - NZ_LR134365.1 Cardiobacterium hominis
333 717863 718129 - NZ_CP012371.1 Nitrosospira briensis C-128
334 2829795 2830058 + NZ_CP046670.1 Alteromonas mediterranea
335 629671 629937 + NZ_CP018911.1 Glycocaulis alkaliphilus
336 4361287 4361553 + NZ_CP060092.1 Teredinibacter purpureus
337 3259905 3260168 + NZ_CP015230.1 Epibacterium mobile F1926
338 492593 492862 + NZ_CP014234.1 Moraxella osloensis
339 298616 298879 - NC_015276.1 Marinomonas mediterranea MMB-1
340 169977 170255 + NZ_CP035510.1 Haematobacter massiliensis
341 1513996 1514262 + NZ_CP065728.1 Moraxella nonliquefaciens
342 2121080 2121373 - NZ_CP020121.1 Comamonas kerstersii
343 1138304 1138564 + NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H
344 3556502 3556768 - NZ_CP021435.1 Halomonas beimenensis
345 327581 327850 + NZ_CP040517.1 Luteithermobacter gelatinilyticus
346 1273684 1273950 - NZ_CP030241.1 Moraxella bovis
347 2088778 2089044 + NZ_CP029397.2 Acinetobacter defluvii
348 394790 395056 + NZ_AP018933.1 Zymobacter palmae
349 495692 495958 - NC_008260.1 Alcanivorax borkumensis SK2
350 1746553 1746816 + NZ_CP070273.1 Marinomonas foliarum
351 3815623 3815886 + NZ_CP054301.1 Marinomonas primoryensis
352 4278309 4278572 + NZ_CP061081.1 Marinomonas arctica
353 865196 865462 + NZ_CP007446.1 Snodgrassella alvi wkB2
354 3058440 3058709 + NZ_CP031415.1 Saccharospirillum mangrovi
355 636120 636383 - NZ_LR134376.1 Aeromonas encheleia
356 1015309 1015575 - NC_010995.1 Cellvibrio japonicus Ueda107
357 3444647 3444913 + NZ_CP036422.1 Halioglobus maricola
358 3176867 3177187 + NC_008781.1 Polaromonas naphthalenivorans CJ2
359 1810139 1810435 - NZ_CP040709.1 Inhella inkyongensis
360 4416313 4416576 + NZ_CP033219.1 Parasedimentitalea marina
361 3033669 3033938 - NZ_CP032519.1 Cupriavidus oxalaticus
362 1997786 1998055 + NZ_CP045871.1 Litoricola lipolytica
363 2820619 2820882 + NZ_CP008849.1 Alteromonas australica
364 581465 581725 - NZ_CP012621.1 Zobellella denitrificans
365 768131 768397 - NZ_CP051183.1 Bermanella marisrubri
366 898732 898995 + NC_013851.1 Allochromatium vinosum DSM 180
367 963994 964260 - NC_008340.1 Alkalilimnicola ehrlichii MLHE-1
368 1912111 1912377 + NZ_CP049801.1 Acinetobacter shaoyimingii
369 1547236 1547502 - NZ_CP049916.1 Acinetobacter lanii
370 2077845 2078111 - NZ_AP022345.1 Fluviibacter phosphoraccumulans
371 1187585 1187848 - NZ_CP038018.1 Eikenella exigua
372 309381 309644 - NZ_LT906482.1 Eikenella corrodens
373 613811 614122 - NZ_CP035708.1 Sphaerotilus natans subsp. sulfidivorans
374 1151257 1151523 - NZ_CP012943.1 Ralstonia solanacearum
375 2247185 2247448 - NZ_CP033040.1 Thiomicrorhabdus indica
376 2254728 2254991 + NC_010645.1 Bordetella avium 197N
377 2604216 2604479 + NZ_CP043146.1 Bordetella holmesii
378 1727006 1727269 - NZ_CP016440.1 Bordetella pseudohinzii
379 1768494 1768757 + NZ_CP008944.1 Corynebacterium atypicum
380 3493988 3494251 - NZ_CP021395.1 Bordetella hinzii
381 1905516 1905779 - NZ_LT907988.1 Orrella dioscoreae
382 1400167 1400469 - NZ_CP027792.1 Pulveribacter suum
383 1424778 1425044 + NZ_CP042382.1 Pistricoccus aurantiacus
384 1367328 1367627 + NZ_CP060783.1 Diaphorobacter aerolatus
385 639903 640166 - NZ_CP009238.1 Basilea psittacipulmonis DSM 24701
386 1766357 1766620 + NZ_CP026948.1 Corynebacterium liangguodongii
387 2024031 2024294 - NZ_CP049037.1 Pseudohalocynthiibacter aestuariivivens
388 2820677 2820940 - NZ_LR134378.1 Lautropia mirabilis
389 3171498 3171761 - NZ_CP041159.1 Leisingera aquaemixtae
390 845310 845570 - NZ_CP011310.1 Aurantiacibacter atlanticus
391 4061463 4061687 + NZ_CP024645.1 Rhizobacter gummiphilus
392 1993588 1993851 - NZ_CP040602.1 Thiomicrorhabdus sediminis
393 524841 525104 + NZ_CP037953.1 Permianibacter aggregans
394 773914 774198 - NC_015174.1 Rubinisphaera brasiliensis DSM 5305
395 699105 699368 + NC_018518.1 Bordetella pertussis 18323
396 1925736 1926005 + NZ_CP032134.1 Acinetobacter chinensis
397 1787433 1787696 - NZ_LR134326.1 Bordetella bronchiseptica
398 3664869 3665132 - NZ_CP013119.1 Alcaligenes faecalis
399 2060673 2060936 - NZ_AP019378.1 Bordetella parapertussis
400 2480423 2480686 - NZ_CP038034.1 Achromobacter insolitus
401 2490499 2490771 + NZ_CP046909.1 Paraburkholderia acidiphila
402 7252255 7252518 - NZ_CP024608.1 Massilia violaceinigra
403 723858 724160 - NC_010524.1 Leptothrix cholodnii SP-6
404 3595404 3595670 + NZ_AP014545.1 Amphritea japonica ATCC BAA-1530
405 4144579 4144842 + NC_023135.1 Leisingera methylohalidivorans DSM 14336
406 2808695 2808958 + NC_010170.1 Bordetella petrii
407 163518 163781 + NC_003911.12 Ruegeria pomeroyi DSS-3
408 358356 358619 - NZ_CP047165.1 Pelistega ratti
409 1736949 1737212 + NZ_CP009215.1 Corynebacterium ureicelerivorans
410 2769107 2769409 + NZ_CP027666.1 Ottowia oryzae
411 2436947 2437210 + NZ_CP053986.1 Achromobacter denitrificans
412 1380955 1381218 - NZ_CP038157.1 Corynebacterium sanguinis
413 3706243 3706506 + NZ_CP021047.1 Phaeobacter gallaeciensis
414 2484185 2484448 - NZ_CP051181.1 Thalassobius gelatinovorus
415 89568 89846 - NZ_CP012676.1 Pseudomonas versuta
416 2138388 2138654 - NZ_CP018845.1 Herbaspirillum robiniae
417 828417 828695 - NZ_CP062158.2 Pseudomonas lundensis
418 1316399 1316665 - NZ_CP012502.1 Bacillus beveridgei
419 2360396 2360659 + NZ_CP027407.1 Roseobacter denitrificans
420 1032420 1032686 - NZ_CP011257.1 Ralstonia mannitolilytica
421 1292805 1293071 - NZ_CP004372.1 Roseibacterium elongatum DSM 19469
422 3864396 3864659 + NZ_CP043046.1 Pigmentiphaga aceris
423 1075963 1076265 + NZ_CP047650.1 Xylophilus rhododendri
424 3565054 3565317 + NZ_LT671418.1 Herminiimonas arsenitoxidans
425 4504540 4504803 + NC_015730.1 Roseobacter litoralis Och 149
426 592260 592520 - NC_017857.3 Methylophaga nitratireducenticrescens
427 1966154 1966417 + NZ_CP019688.1 Corynebacterium glaucum
428 3860905 3861168 + NZ_CP048788.1 Roseobacter ponti
429 3705569 3705832 + NZ_CP010650.1 Phaeobacter inhibens
430 1425031 1425309 - NZ_CP049044.1 Pseudomonas psychrophila
431 1107776 1108075 - NZ_CP054840.1 Acidovorax antarcticus
432 990477 990779 - NZ_CP021455.1 Comamonas serinivorans
433 2510713 2510979 + NZ_CP016268.1 Woeseia oceani
434 4077167 4077433 + NZ_CP034464.1 Undibacterium parvum
435 1766151 1766414 - NZ_CP007030.1 Thiomicrospira aerophila AL3
436 4712851 4713123 + NZ_CP010310.2 Pandoraea pulmonicola
437 4487754 4488026 + NZ_CP010897.2 Pandoraea vervacti
438 2966399 2966716 + NC_015677.1 Ramlibacter tataouinensis TTB310
439 1637920 1638225 + NZ_AP014569.1 Serpentinomonas mccroryi
440 1724534 1724836 + NZ_AP014568.1 Serpentinomonas raichei
441 2272083 2272349 + NZ_CP028324.1 Massilia armeniaca
442 535037 535309 + NZ_CP018787.1 Oxalobacter formigenes
443 1133725 1133991 + NZ_CP013235.1 Collimonas arenae
444 4112294 4112566 + NZ_CP011807.3 Pandoraea faecigallinarum
445 1804105 1804368 + NZ_CP068055.1 Sutterella wadsworthensis
446 1082664 1082975 - NZ_CP051461.1 Polaromonas vacuolata
447 1804093 1804359 - NZ_CP003915.1 Advenella mimigardefordensis DPN7
448 1968945 1969211 + NZ_CP023422.1 Janthinobacterium svalbardensis
449 5742260 5742526 + NZ_CP041185.1 Janthinobacterium tructae
450 1896476 1896742 + NZ_CP048832.1 Janthinobacterium lividum
451 1909157 1909429 - NZ_CP047385.1 Pandoraea fibrosis
452 3961247 3961513 + NZ_CP053086.1 Pelagibacterium halotolerans
453 2300523 2300786 + NZ_CP058952.1 Chitinibacter fontanus
454 2167122 2167382 - NC_017856.1 Methylophaga frappieri
455 4457333 4457605 + NZ_CP011253.3 Pandoraea oxalativorans
456 4577942 4578214 + NZ_LT906435.1 Pandoraea sputorum
457 3297144 3297416 - NZ_CP011388.1 Paenibacillus swuensis
458 2920905 2921204 + NZ_CP065748.1 Delftia lacustris
459 2891560 2891859 + NZ_CP017420.1 Delftia tsuruhatensis
460 4236566 4236838 + NC_023018.2 Pandoraea pnomenusa
461 4274085 4274354 - NZ_CP013232.1 Collimonas fungivorans
462 1050193 1050465 + NZ_CP040882.1 Sutterella faecalis
463 5293519 5293782 - NZ_LR134302.1 Achromobacter spanius
464 1517023 1517322 - NZ_CP051298.1 Alicycliphilus denitrificans
465 354634 354936 - NZ_CP016278.1 Diaphorobacter polyhydroxybutyrativorans
466 1358909 1359208 - NZ_CP060714.1 Diaphorobacter ruginosibacter
467 2889537 2889806 - NZ_CP016022.1 Ralstonia insidiosa
468 4528033 4528296 + NZ_CP004393.1 Celeribacter indicus
469 1595705 1595971 + NZ_CP011930.1 Herbaspirillum seropedicae
470 1426434 1426700 + NZ_CP013737.1 Herbaspirillum rubrisubalbicans M1
471 1570501 1570767 + NZ_CP037993.1 Herbaspirillum huttiense
472 2474663 2474932 - NZ_CP025583.1 Paracoccus jeotgali
473 1391332 1391595 + NZ_CP028901.1 Algicoccus marinus
474 1332308 1332577 + NZ_AP014690.1 Asaia bogorensis NBRC 16594
475 2774830 2775090 - NZ_CP009291.1 Novosphingobium pentaromativorans US6-1
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_AP017928.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF03023.16 0.66 311 250 opposite-strand Lipid II flippase MurJ
2 PF14667.8 0.64 302 251.0 opposite-strand Polysaccharide biosynthesis C-terminal domain
++ More..