Result : EXP02588
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP02588 |
| NCBI Accession ID | |
| Organism | Veillonella |
| Left | |
| Right | |
| Strand | |
| Nucleotide Sequence | ATGATTGGTGGATTGACAGGTATTCAAGGTGTGTACTTTGGTGGTACAGCACTACTTATCGTAGTGGGCGTAGCATTAGATACAATGCAACAAGTAGAATCTTTAGTATTAACACGCCAATATAAGGGCTTTGTGAAATAG |
| Sequence | MIGGLTGIQGVYFGGTALLIVVGVALDTMQQVESLVLTRQYKGFVK |
| Source of smORF | Metagenomic Ribo-seq |
| Function | |
| Pubmed ID | 32601270 |
| Domain | |
| Functional Category | Function not yet assigned |
| Uniprot ID | |
| ORF Length (Amino Acid) | 46 |
++ More..
| Conservation Analysis |
No. of Species: 396
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1106650 | 1106799 | + | NZ_AP019004.1 | Phascolarctobacterium faecium |
| 2 | 2124302 | 2124442 | - | NC_013740.1 | Acidaminococcus fermentans DSM 20731 |
| 3 | 1514489 | 1514629 | - | NZ_LT906446.1 | Megamonas hypermegale |
| 4 | 1632021 | 1632173 | - | NC_015437.1 | Selenomonas sputigena ATCC 35185 |
| 5 | 866158 | 866310 | + | NZ_CP061336.1 | Ruminiclostridium herbifermentans |
| 6 | 2654715 | 2654843 | - | NC_008346.1 | Syntrophomonas wolfei subsp. wolfei str. Goettingen G311 |
| 7 | 2953084 | 2953215 | - | NZ_CP045875.1 | Heliorestis convoluta |
| 8 | 510417 | 510551 | + | NC_018068.1 | Desulfosporosinus acidiphilus SJ4 |
| 9 | 242178 | 242312 | + | NC_009253.1 | Desulfotomaculum reducens MI-1 |
| 10 | 1414000 | 1414128 | + | NC_010337.2 | Heliomicrobium modesticaldum Ice1 |
| 11 | 2739896 | 2740036 | - | NC_014831.1 | Thermaerobacter marianensis DSM 12885 |
| 12 | 323205 | 323354 | + | NC_013216.1 | Desulfofarcimen acetoxidans DSM 771 |
| 13 | 2250555 | 2250704 | - | NC_014220.1 | Syntrophothermus lipocalidus DSM 12680 |
| 14 | 396269 | 396418 | + | NZ_CP019698.1 | Desulfotomaculum ferrireducens |
| 15 | 353751 | 353885 | + | NC_021184.1 | Desulfoscipio gibsoniae DSM 7213 |
| 16 | 312460 | 312621 | + | NZ_CP007032.1 | Desulfitobacterium metallireducens DSM 15288 |
| 17 | 471819 | 471980 | + | NC_019903.1 | Desulfitobacterium dichloroeliminans LMG P-21439 |
| 18 | 1506567 | 1506704 | - | NC_013385.1 | Ammonifex degensii KC4 |
| 19 | 2063451 | 2063585 | - | NC_007503.1 | Carboxydothermus hydrogenoformans Z-2901 |
| 20 | 566569 | 566703 | + | NZ_CP046996.1 | Dehalobacter restrictus |
| 21 | 1180152 | 1180289 | + | NZ_CP022121.1 | Dehalobacterium formicoaceticum |
| 22 | 2589011 | 2589148 | - | NC_018870.1 | Thermacetogenium phaeum DSM 12270 |
| 23 | 2487846 | 2487977 | - | NZ_CP017237.1 | Moorella thermoacetica |
| 24 | 4360523 | 4360657 | - | NZ_CP022657.1 | Tumebacillus algifaecis |
| 25 | 2256874 | 2257023 | - | NZ_LT906477.1 | Clostridium cochlearium |
| 26 | 157139 | 157279 | + | NZ_CP024955.1 | Kyrpidia spormannii |
| 27 | 163728 | 163868 | + | NC_014098.1 | Kyrpidia tusciae DSM 2912 |
| 28 | 3614127 | 3614240 | - | NZ_CP014167.1 | Paenibacillus yonginensis |
| 29 | 131779 | 131907 | + | NZ_CP015378.1 | Fictibacillus phosphorivorans |
| 30 | 1934219 | 1934335 | - | NC_014209.1 | Thermoanaerobacter mathranii subsp. mathranii str. A3 |
| 31 | 2001546 | 2001662 | - | NC_013921.1 | Thermoanaerobacter italicus Ab9 |
| 32 | 3545560 | 3545706 | + | NZ_CP016379.1 | Anoxybacter fermentans |
| 33 | 1954448 | 1954579 | - | NZ_CP009170.1 | Thermoanaerobacter kivui |
| 34 | 424355 | 424471 | + | NC_014964.1 | Thermoanaerobacter brockii subsp. finnii Ako-1 |
| 35 | 1797400 | 1797519 | + | NZ_CP021434.1 | Tumebacillus avium |
| 36 | 207866 | 207997 | + | NC_019978.1 | Halobacteroides halobius DSM 5150 |
| 37 | 1142823 | 1142969 | - | NZ_CP068595.1 | Paenibacillus sonchi |
| 38 | 7128090 | 7128236 | - | NZ_LN831776.1 | Paenibacillus riograndensis SBR5 |
| 39 | 2165992 | 2166108 | - | NC_003869.1 | Caldanaerobacter subterraneus subsp. tengcongensis MB4 |
| 40 | 1120497 | 1120643 | - | NZ_CP048429.1 | Paenibacillus jilunlii |
| 41 | 5984176 | 5984313 | - | NZ_CP041695.1 | Nocardia otitidiscaviarum |
| 42 | 2284717 | 2284848 | - | NC_015958.1 | Thermoanaerobacter wiegelii Rt8.B1 |
| 43 | 5288892 | 5289005 | - | NZ_CP009288.1 | Paenibacillus durus |
| 44 | 7392025 | 7392171 | - | NZ_CP009285.1 | Paenibacillus borealis |
| 45 | 2943081 | 2943206 | - | NZ_CP054614.1 | Paenibacillus barcinonensis |
| 46 | 6273836 | 6273961 | - | NZ_CP021780.1 | Paenibacillus donghaensis |
| 47 | 1433654 | 1433773 | + | NC_008726.1 | Mycolicibacterium vanbaalenii PYR-1 |
| 48 | 6427168 | 6427302 | - | NZ_CP009287.1 | Paenibacillus graminis |
| 49 | 137649 | 137795 | + | NC_014377.1 | Thermosediminibacter oceani DSM 16646 |
| 50 | 3909251 | 3909370 | - | NC_013441.1 | Gordonia bronchialis DSM 43247 |
| 51 | 6148860 | 6148985 | - | NZ_CP009428.1 | Paenibacillus odorifer |
| 52 | 5011442 | 5011555 | - | NZ_CP009286.1 | Paenibacillus stellifer |
| 53 | 1191736 | 1191855 | + | NZ_CP011491.1 | Mycolicibacterium vaccae 95051 |
| 54 | 277219 | 277341 | + | NZ_LR134338.1 | Brevibacillus brevis |
| 55 | 978994 | 979131 | + | NZ_AP023396.1 | Nocardia wallacei |
| 56 | 416017 | 416151 | + | NC_015172.1 | Syntrophobotulus glycolicus DSM 8271 |
| 57 | 4681826 | 4681939 | - | NZ_CP004078.1 | Paenibacillus sabinae T27 |
| 58 | 791403 | 791522 | + | NC_013525.1 | Thermobaculum terrenum ATCC BAA-798 |
| 59 | 4836265 | 4836378 | - | NZ_CP045293.1 | Paenibacillus guangzhouensis |
| 60 | 5496211 | 5496330 | + | NZ_CP033972.1 | Gordonia insulae |
| 61 | 1526641 | 1526754 | - | NZ_CP045298.1 | Paenibacillus brasilensis |
| 62 | 976048 | 976215 | + | NC_013501.1 | Rhodothermus marinus DSM 4252 |
| 63 | 775494 | 775607 | - | NC_016641.1 | Paenibacillus terrae HPL-003 |
| 64 | 1817394 | 1817510 | - | NZ_CP035130.1 | Gudongella oleilytica |
| 65 | 1254595 | 1254744 | + | NZ_CP025546.1 | Mycobacterium paragordonae |
| 66 | 670764 | 670877 | + | NZ_CP020028.1 | Paenibacillus kribbensis |
| 67 | 4988204 | 4988365 | - | NZ_CP059694.1 | Gordonia rubripertincta |
| 68 | 5516588 | 5516707 | - | NZ_AP022574.1 | Mycolicibacterium psychrotolerans |
| 69 | 4551138 | 4551290 | - | NZ_CP015756.1 | Clostridium estertheticum subsp. estertheticum |
| 70 | 3992685 | 3992834 | + | NZ_CP016809.1 | Paenibacillus ihbetae |
| 71 | 658340 | 658477 | + | NZ_CP014176.1 | Clostridium argentinense |
| 72 | 161662 | 161793 | + | NZ_CP041666.1 | Radiobacillus deserti |
| 73 | 859621 | 859770 | + | NC_006361.1 | Nocardia farcinica IFM 10152 |
| 74 | 276673 | 276816 | + | NZ_CP032416.1 | Clostridium fermenticellae |
| 75 | 654998 | 655117 | - | NZ_CP026746.1 | Nocardia cyriacigeorgica |
| 76 | 2797018 | 2797167 | + | NZ_CP011058.1 | Paenibacillus beijingensis |
| 77 | 1023858 | 1024016 | + | NZ_LR130759.1 | Mycobacterium basiliense |
| 78 | 664615 | 664734 | + | NZ_AP022613.1 | Mycobacterium conspicuum |
| 79 | 1341140 | 1341286 | + | NZ_CP016312.1 | Thermus brockianus |
| 80 | 1556221 | 1556367 | - | NZ_CP038452.1 | Thermus caldilimi |
| 81 | 4338853 | 4339011 | + | NC_022663.1 | Mycobacterium kansasii ATCC 12478 |
| 82 | 1970203 | 1970340 | + | NZ_CP061703.1 | Mesoflavibacter profundi |
| 83 | 4516685 | 4516804 | + | NZ_AP022569.1 | Mycobacterium cookii |
| 84 | 876018 | 876179 | + | NZ_CP019352.1 | Lacinutrix venerupis |
| 85 | 3542826 | 3542969 | - | NZ_CP010271.1 | Mycobacteroides saopaulense |
| 86 | 919506 | 919661 | - | NZ_CP016359.1 | Gramella flava JLT2011 |
| 87 | 223729 | 223863 | + | NC_015519.1 | Tepidanaerobacter acetatoxydans Re1 |
| 88 | 179137 | 179259 | + | NC_002570.2 | Alkalihalobacillus halodurans C-125 |
| 89 | 2417853 | 2417993 | - | NZ_LR590481.1 | Hathewaya histolytica |
| 90 | 2332172 | 2332294 | + | NZ_CP017705.1 | Brevibacillus laterosporus DSM 25 |
| 91 | 1429428 | 1429565 | + | NZ_AP022618.1 | Mycolicibacterium insubricum |
| 92 | 3427935 | 3428060 | - | NZ_AP014924.1 | Limnochorda pilosa |
| 93 | 3899303 | 3899422 | - | NZ_AP018165.1 | [Mycobacterium] stephanolepidis |
| 94 | 3885944 | 3886063 | - | NZ_CP007220.1 | Mycobacteroides chelonae CCUG 47445 |
| 95 | 2732077 | 2732214 | - | NZ_CP034549.1 | Nonlabens ponticola |
| 96 | 2933623 | 2933784 | - | NC_008571.1 | Gramella forsetii KT0803 |
| 97 | 1757554 | 1757679 | + | NZ_CP043611.1 | Paenibacillus antarcticus |
| 98 | 2809401 | 2809556 | + | NZ_CP018153.1 | Gramella salexigens |
| 99 | 439333 | 439464 | + | NC_014410.1 | Thermoanaerobacterium thermosaccharolyticum DSM 571 |
| 100 | 1692646 | 1692783 | - | NZ_CP040812.1 | Antarcticibacterium flavum |
| 101 | 4160756 | 4160920 | - | NC_014041.1 | Zunongwangia profunda SM-A87 |
| 102 | 1699447 | 1699608 | + | NZ_CP041637.1 | Formosa sediminum |
| 103 | 1545757 | 1545888 | - | NC_014657.1 | Caldicellulosiruptor owensensis OL |
| 104 | 3386480 | 3386635 | + | NZ_CP012898.1 | Algibacter alginicilyticus |
| 105 | 1154867 | 1154998 | + | NC_014720.1 | Caldicellulosiruptor kronotskyensis 2002 |
| 106 | 1014215 | 1014346 | + | NZ_CP034791.1 | Caldicellulosiruptor changbaiensis |
| 107 | 1810809 | 1810940 | - | NC_012034.1 | Caldicellulosiruptor bescii DSM 6725 |
| 108 | 2395331 | 2395462 | - | NC_009437.1 | Caldicellulosiruptor saccharolyticus DSM 8903 |
| 109 | 835357 | 835518 | - | NZ_CP039456.1 | Changchengzhania lutea |
| 110 | 157548 | 157703 | + | NZ_CP017962.1 | Virgibacillus halodenitrificans |
| 111 | 5447310 | 5447459 | - | NZ_AP022560.1 | Mycolicibacterium moriokaense |
| 112 | 1804537 | 1804668 | - | NC_014721.1 | Caldicellulosiruptor kristjanssonii I77R1B |
| 113 | 1047501 | 1047632 | + | NC_014652.1 | Caldicellulosiruptor hydrothermalis 108 |
| 114 | 230107 | 230226 | + | NC_010718.1 | Natranaerobius thermophilus JW/NM-WN-LF |
| 115 | 2797355 | 2797474 | - | NZ_AP022608.1 | Mycolicibacterium gadium |
| 116 | 5582730 | 5582849 | + | NZ_AP022601.1 | Mycobacterium gallinarum |
| 117 | 363144 | 363275 | + | NC_015555.1 | Thermoanaerobacterium xylanolyticum LX-11 |
| 118 | 2247780 | 2247911 | - | NZ_CP047602.1 | Thermoanaerobacterium aotearoense |
| 119 | 1207525 | 1207656 | - | NC_015949.1 | Caldicellulosiruptor lactoaceticus 6A |
| 120 | 5262938 | 5263075 | + | NZ_AP022620.1 | Mycolicibacterium anyangense |
| 121 | 4166331 | 4166444 | + | NZ_CP025791.1 | Flavivirga eckloniae |
| 122 | 3974486 | 3974605 | - | NZ_CP027793.1 | Rhodococcus hoagii |
| 123 | 3731024 | 3731149 | + | NZ_CP035492.1 | Paenibacillus protaetiae |
| 124 | 789204 | 789365 | - | NZ_CP025938.1 | Tamlana carrageenivorans |
| 125 | 983594 | 983725 | + | NC_014392.1 | Caldicellulosiruptor obsidiansis OB47 |
| 126 | 1069714 | 1069827 | - | NC_018721.1 | Psychroflexus torquis ATCC 700755 |
| 127 | 4671117 | 4671254 | - | NZ_AP022561.1 | Mycolicibacterium aichiense |
| 128 | 233190 | 233309 | - | NZ_AP022598.1 | Mycolicibacterium parafortuitum |
| 129 | 1149290 | 1149409 | + | NZ_LR134356.1 | Mycolicibacterium aurum |
| 130 | 2533437 | 2533592 | - | NZ_CP013862.1 | Lentibacillus amyloliquefaciens |
| 131 | 226891 | 227046 | - | NZ_CP007202.1 | Siansivirga zeaxanthinifaciens CC-SAMT-1 |
| 132 | 3606247 | 3606405 | - | NZ_CP024633.1 | Mycobacteroides salmoniphilum |
| 133 | 4745789 | 4745926 | + | NZ_CP018866.1 | Sutcliffiella cohnii |
| 134 | 3319673 | 3319792 | + | NZ_AP022600.1 | Mycolicibacterium tokaiense |
| 135 | 3068761 | 3068883 | - | NZ_CP048104.1 | Kroppenstedtia pulmonis |
| 136 | 3981762 | 3981899 | - | NZ_AP022612.1 | Mycolicibacterium confluentis |
| 137 | 1678644 | 1678805 | - | NZ_AP022568.1 | Mycobacterium simiae |
| 138 | 2066586 | 2066750 | + | NC_018013.1 | Aequorivita sublithincola DSM 14238 |
| 139 | 1364584 | 1364706 | - | NZ_CP018622.1 | Virgibacillus dokdonensis |
| 140 | 2524793 | 2524930 | + | NZ_AP022595.1 | Mycolicibacterium sarraceniae |
| 141 | 1255879 | 1256016 | - | NZ_AP022596.1 | Mycolicibacterium helvum |
| 142 | 1514950 | 1515099 | + | NZ_CP011269.1 | Mycolicibacterium fortuitum |
| 143 | 2971112 | 2971231 | - | NZ_AP022575.1 | Mycobacterium shinjukuense |
| 144 | 2905077 | 2905196 | - | NZ_AP022587.1 | Mycobacterium stomatepiae |
| 145 | 2664264 | 2664383 | - | NZ_AP022576.1 | Mycobacterium florentinum |
| 146 | 1835653 | 1835787 | - | NC_017455.1 | Halanaerobium praevalens DSM 2228 |
| 147 | 819501 | 819644 | - | NC_010003.1 | Petrotoga mobilis SJ95 |
| 148 | 2158558 | 2158725 | - | NC_008148.1 | Rubrobacter xylanophilus DSM 9941 |
| 149 | 2434586 | 2434720 | + | NC_015167.1 | Cellulophaga lytica DSM 7489 |
| 150 | 1053440 | 1053571 | - | NZ_CP022315.1 | Virgibacillus phasianinus |
| 151 | 1946698 | 1946850 | + | NZ_LT906449.1 | Capnocytophaga haemolytica |
| 152 | 6122541 | 6122675 | - | NZ_AP019400.1 | Cohnella abietis |
| 153 | 320780 | 320893 | + | NC_019897.1 | Thermobacillus composti KWC4 |
| 154 | 162214 | 162345 | - | NZ_CP022437.1 | Virgibacillus necropolis |
| 155 | 166856 | 166990 | + | NC_014829.1 | Evansella cellulosilytica DSM 2522 |
| 156 | 3949232 | 3949369 | - | NZ_CP011663.1 | Clostridium sporogenes |
| 157 | 2364574 | 2364696 | + | NZ_CP031092.1 | Salicibibacter kimchii |
| 158 | 190143 | 190274 | + | NC_014378.1 | Acetohalobium arabaticum DSM 5501 |
| 159 | 3523964 | 3524101 | - | NZ_AP022563.1 | Mycolicibacterium duvalii |
| 160 | 2070433 | 2070555 | - | NZ_CP035485.1 | Salicibibacter halophilus |
| 161 | 1381361 | 1381495 | + | NC_013162.1 | Capnocytophaga ochracea DSM 7271 |
| 162 | 3306504 | 3306638 | - | NZ_CP022022.1 | Capnocytophaga endodontalis |
| 163 | 5539686 | 5539847 | - | NZ_CP022088.2 | Nocardia brasiliensis |
| 164 | 6061520 | 6061633 | + | NZ_AP019308.1 | Paenibacillus baekrokdamisoli |
| 165 | 2062338 | 2062472 | + | NZ_CP022379.1 | Capnocytophaga sputigena |
| 166 | 1492738 | 1492890 | - | NZ_CP022386.1 | Capnocytophaga gingivalis |
| 167 | 149481 | 149603 | + | NZ_CP059540.1 | Planococcus maritimus |
| 168 | 149640 | 149762 | + | NZ_CP016538.2 | Planococcus maritimus |
| 169 | 1127281 | 1127400 | + | NZ_AP017900.1 | Nocardia seriolae |
| 170 | 6307495 | 6307608 | - | NZ_CP048209.1 | Paenibacillus lycopersici |
| 171 | 4125259 | 4125402 | - | NZ_CP031223.1 | Psychrobacillus glaciei |
| 172 | 1991463 | 1991594 | + | NZ_CP022387.1 | Capnocytophaga stomatis |
| 173 | 786243 | 786392 | - | NZ_CP022378.1 | Capnocytophaga cynodegmi |
| 174 | 4228306 | 4228419 | + | NZ_CP048286.1 | Paenibacillus rhizovicinus |
| 175 | 2427014 | 2427175 | + | NZ_CP043474.1 | Mycobacterium grossiae |
| 176 | 3229082 | 3229219 | + | NZ_CP042476.1 | Antarcticibacterium arcticum |
| 177 | 2750941 | 2751060 | + | NZ_AP022583.1 | Mycobacterium noviomagense |
| 178 | 3966938 | 3967099 | - | NZ_AP024310.1 | Mycobacterium heckeshornense |
| 179 | 1217176 | 1217295 | + | NZ_AP022610.1 | Mycolicibacterium madagascariense |
| 180 | 1160854 | 1161006 | + | NC_013523.1 | Sphaerobacter thermophilus DSM 20745 |
| 181 | 146362 | 146508 | + | NC_011899.1 | Halothermothrix orenii H 168 |
| 182 | 243258 | 243419 | - | NZ_CP015235.1 | Rhodococcus fascians D188 |
| 183 | 2491542 | 2491679 | + | NZ_AP022588.1 | Mycolicibacterium sediminis |
| 184 | 413606 | 413761 | - | NZ_CP028136.1 | Gramella fulva |
| 185 | 535117 | 535236 | - | NZ_AP022606.1 | Mycobacterium branderi |
| 186 | 5022519 | 5022662 | + | NZ_AP022619.1 | Mycobacterium paraseoulense |
| 187 | 4396965 | 4397078 | + | NZ_CP045295.1 | Paenibacillus cellulositrophicus |
| 188 | 5221758 | 5221907 | + | NZ_AP022582.1 | Mycobacterium seoulense |
| 189 | 3927070 | 3927216 | - | NZ_CP013019.1 | Clostridium pasteurianum |
| 190 | 2390747 | 2390884 | - | NZ_AP022593.1 | Mycolicibacterium arabiense |
| 191 | 147554 | 147676 | + | NZ_CP042593.1 | Bacillus dafuensis |
| 192 | 991026 | 991187 | + | NZ_AP018164.1 | Mycobacterium shigaense |
| 193 | 3454029 | 3454172 | - | NZ_AP022590.1 | Mycobacterium mantenii |
| 194 | 3652179 | 3652298 | - | NZ_AP022581.1 | Mycobacterium lacus |
| 195 | 791312 | 791473 | + | NZ_CP011883.2 | Mycobacterium haemophilum DSM 44634 |
| 196 | 4360105 | 4360224 | - | NZ_CP009360.4 | Mycobacterium avium subsp. hominissuis |
| 197 | 3302483 | 3302602 | - | NZ_AP022614.1 | Mycobacterium parmense |
| 198 | 4778109 | 4778228 | + | NZ_AP022573.1 | Mycobacterium saskatchewanense |
| 199 | 4411263 | 4411406 | - | NZ_CP023147.1 | Mycobacterium marseillense |
| 200 | 4532652 | 4532795 | - | NC_016946.1 | Mycobacterium intracellulare ATCC 13950 |
| 201 | 4666455 | 4666598 | - | NC_016948.1 | Mycobacterium paraintracellulare |
| 202 | 4587919 | 4588032 | + | NZ_CP013652.1 | Paenibacillus naphthalenovorans |
| 203 | 2972959 | 2973078 | + | NZ_AP022562.1 | Mycobacterium novum |
| 204 | 3510938 | 3511057 | - | NC_015576.1 | Mycolicibacter sinensis |
| 205 | 2103040 | 2103174 | - | NC_014654.1 | Halanaerobium hydrogeniformans |
| 206 | 3494562 | 3494699 | - | NZ_LT906469.1 | Mycolicibacter terrae |
| 207 | 250115 | 250246 | + | NZ_CP048103.1 | Kroppenstedtia eburnea |
| 208 | 1405204 | 1405368 | + | NC_010814.1 | Geobacter lovleyi SZ |
| 209 | 2884251 | 2884388 | - | NZ_AP022609.1 | Mycolicibacter hiberniae |
| 210 | 1033874 | 1034011 | - | NZ_AP022589.1 | Mycolicibacter minnesotensis |
| 211 | 2984892 | 2985023 | + | NZ_CP038012.1 | Sporosarcina pasteurii |
| 212 | 440484 | 440615 | + | NZ_CP017560.1 | Sporosarcina ureilytica |
| 213 | 8367756 | 8367905 | - | NC_017672.3 | Paenibacillus mucilaginosus K02 |
| 214 | 826006 | 826125 | + | NC_000962.3 | Mycobacterium tuberculosis H37Rv |
| 215 | 841198 | 841317 | + | NC_015848.1 | Mycobacterium canettii CIPT 140010059 |
| 216 | 145697 | 145822 | + | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 217 | 3528046 | 3528186 | - | NZ_CP030775.1 | Clostridium butyricum |
| 218 | 2186049 | 2186207 | - | NZ_AP022577.1 | Mycolicibacterium aubagnense |
| 219 | 3784757 | 3784882 | - | NZ_CP011937.1 | Bacillus velezensis |
| 220 | 1863880 | 1864005 | - | NZ_CP029364.1 | Bacillus halotolerans |
| 221 | 146659 | 146784 | + | NZ_CP053376.1 | Bacillus amyloliquefaciens |
| 222 | 145398 | 145523 | + | NZ_CP051464.1 | Bacillus mojavensis |
| 223 | 145637 | 145762 | + | NZ_CP048852.1 | Bacillus tequilensis |
| 224 | 145523 | 145648 | + | NZ_CP034943.1 | Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 |
| 225 | 115417 | 115542 | + | NZ_CP013984.1 | Bacillus inaquosorum |
| 226 | 281684 | 281809 | + | NZ_CP033052.1 | Bacillus vallismortis |
| 227 | 857751 | 857918 | - | NZ_AP023049.1 | Alistipes indistinctus |
| 228 | 1457102 | 1457257 | + | NZ_CP015125.1 | Dokdonia donghaensis DSW-1 |
| 229 | 2616088 | 2616213 | + | NZ_CP011388.1 | Paenibacillus swuensis |
| 230 | 809919 | 810080 | - | NZ_CP029463.1 | Flavobacterium sediminis |
| 231 | 1931817 | 1931933 | - | NZ_CP068564.1 | Keratinibaculum paraultunense |
| 232 | 2985992 | 2986135 | - | NC_014168.1 | Segniliparus rotundus DSM 44985 |
| 233 | 765933 | 766070 | + | NC_022116.1 | Amycolatopsis mediterranei RB |
| 234 | 1878537 | 1878698 | + | NZ_CP011232.1 | Kosmotoga pacifica |
| 235 | 2123730 | 2123852 | + | NZ_CP015108.1 | Sporosarcina ureae |
| 236 | 2000110 | 2000268 | - | NC_006085.1 | Cutibacterium acnes KPA171202 |
| 237 | 1473963 | 1474115 | + | NC_013222.1 | Robiginitalea biformata HTCC2501 |
| 238 | 1678444 | 1678581 | + | NZ_CP042831.1 | Flavobacterium alkalisoli |
| 239 | 770375 | 770488 | - | NZ_CP011071.1 | Muricauda lutaonensis |
| 240 | 189997 | 190110 | + | NZ_CP034118.1 | Staphylospora marina |
| 241 | 715177 | 715311 | - | NC_015945.1 | Muricauda ruestringensis DSM 13258 |
| 242 | 880298 | 880432 | - | NZ_CP030104.1 | Flagellimonas maritima |
| 243 | 201048 | 201206 | + | NZ_CP043998.1 | Clostridium diolis |
| 244 | 2685942 | 2686094 | + | NZ_CP058595.1 | Costertonia aggregata |
| 245 | 703016 | 703150 | - | NC_014934.1 | Cellulophaga algicola DSM 14237 |
| 246 | 255456 | 255593 | - | NZ_CP029186.1 | Flavobacterium album |
| 247 | 13493 | 13630 | - | NZ_LT906441.1 | Cutibacterium granulosum |
| 248 | 241870 | 242004 | - | NZ_CP009976.1 | Cellulophaga baltica 18 |
| 249 | 810354 | 810512 | - | NZ_CP022957.1 | Maribacter cobaltidurans |
| 250 | 391664 | 391801 | + | NC_021064.1 | Cutibacterium avidum 44067 |
| 251 | 3459299 | 3459421 | + | NZ_CP008876.1 | Terribacillus goriensis |
| 252 | 4301252 | 4301386 | - | NZ_CP009896.1 | Pimelobacter simplex |
| 253 | 209673 | 209801 | + | NZ_CP010820.1 | Lysinibacillus fusiformis |
| 254 | 1245799 | 1245948 | + | NC_011653.1 | Thermosipho africanus TCF52B |
| 255 | 4491116 | 4491244 | - | NZ_CP006837.1 | Lysinibacillus varians |
| 256 | 253485 | 253613 | + | NZ_CP019980.1 | Lysinibacillus sphaericus |
| 257 | 689326 | 689475 | + | NZ_CP012502.1 | Bacillus beveridgei |
| 258 | 11093625 | 11093762 | - | NZ_CP012752.1 | Kibdelosporangium phytohabitans |
| 259 | 409652 | 409789 | + | NC_013159.1 | Saccharomonospora viridis DSM 43017 |
| 260 | 151686 | 151832 | + | NC_004193.1 | Oceanobacillus iheyensis HTE831 |
| 261 | 488715 | 488861 | + | NZ_CP006841.1 | Corynebacterium lactis RW2-5 |
| 262 | 3047821 | 3047967 | - | NZ_CP045737.1 | Aeromicrobium yanjiei |
| 263 | 3060354 | 3060500 | - | NZ_CP026952.1 | Aeromicrobium chenweiae |
| 264 | 3293094 | 3293228 | - | NZ_CP011853.1 | Gordonia phthalatica |
| 265 | 651078 | 651221 | + | NZ_CP016353.1 | Prauserella marina |
| 266 | 3278746 | 3278883 | + | NZ_CP017478.1 | Urechidicola croceus |
| 267 | 1446950 | 1447081 | - | NZ_CP041146.1 | Nocardioides humi |
| 268 | 3663837 | 3663971 | + | NZ_CP044344.1 | Nocardioides cynanchi |
| 269 | 1340711 | 1340845 | + | NZ_CP022295.1 | Nocardioides aromaticivorans |
| 270 | 861057 | 861170 | - | NZ_CP054494.1 | Flavobacterium columnare |
| 271 | 3405581 | 3405697 | + | NZ_CP037933.1 | Flavobacterium nackdongense |
| 272 | 403812 | 403946 | + | NZ_CP049257.1 | Nocardioides anomalus |
| 273 | 245947 | 246090 | + | NC_008593.1 | Clostridium novyi NT |
| 274 | 6383360 | 6383485 | - | NZ_CP026520.1 | Paenibacillus chitinolyticus |
| 275 | 824724 | 824861 | - | NZ_CP017774.1 | Flavobacterium commune |
| 276 | 1731921 | 1732037 | + | NZ_CP020918.1 | Flavobacterium faecale |
| 277 | 1792524 | 1792691 | + | NZ_AP019736.1 | Alistipes dispar |
| 278 | 1184721 | 1184858 | + | NZ_CP017688.1 | Flavobacterium crassostreae |
| 279 | 1402975 | 1403142 | + | NZ_LR027382.1 | Alistipes megaguti |
| 280 | 2573830 | 2573958 | + | NZ_CP060713.1 | Nocardioides mesophilus |
| 281 | 189809 | 189925 | - | NZ_CP017479.1 | Flavobacterium gilvum |
| 282 | 720282 | 720416 | + | NZ_CP048649.1 | Aminipila butyrica |
| 283 | 263017 | 263151 | + | NC_020995.1 | Enterococcus casseliflavus EC20 |
| 284 | 2436611 | 2436748 | + | NZ_CP016907.1 | Flavobacterium anhuiense |
| 285 | 2355415 | 2355552 | + | NZ_CP043612.1 | Flavobacterium nitrogenifigens |
| 286 | 404782 | 404919 | - | NZ_CP029255.1 | Flavobacterium crocinum |
| 287 | 397247 | 397384 | - | NC_009441.1 | Flavobacterium johnsoniae UW101 |
| 288 | 1933647 | 1933805 | + | NC_018011.1 | Alistipes finegoldii DSM 17242 |
| 289 | 2441926 | 2442063 | - | NZ_AP022565.1 | Mycolicibacterium alvei |
| 290 | 1769858 | 1769986 | - | NZ_CP013988.1 | Aerococcus urinaeequi |
| 291 | 433467 | 433601 | + | NZ_CP014164.1 | Aerococcus viridans |
| 292 | 2808894 | 2809031 | - | NZ_CP014224.1 | Wenyingzhuangia fucanilytica |
| 293 | 4479973 | 4480110 | + | NZ_AP022567.1 | Mycolicibacterium mageritense |
| 294 | 3984952 | 3985110 | - | NZ_CP032050.1 | Euzebyella marina |
| 295 | 1063526 | 1063666 | + | NZ_LT906483.1 | Mycolicibacterium thermoresistibile |
| 296 | 3963513 | 3963650 | - | NZ_LR134355.1 | Mycolicibacterium chitae |
| 297 | 2986700 | 2986834 | + | NC_015844.1 | Zobellia galactanivorans |
| 298 | 2130000 | 2130155 | - | NZ_CP029256.1 | Christensenella minuta |
| 299 | 243488 | 243649 | + | NZ_CP017253.2 | Clostridium taeniosporum |
| 300 | 406370 | 406519 | + | NZ_CP006950.1 | Dehalococcoides mccartyi CG4 |
| 301 | 592061 | 592198 | - | NZ_CP031188.1 | Flavobacterium arcticum |
| 302 | 2053575 | 2053712 | - | NZ_CP021874.1 | Enterococcus wangshanyuanii |
| 303 | 2645606 | 2645740 | + | NZ_LR214441.1 | Tessaracoccus lapidicaptus |
| 304 | 1827205 | 1827363 | + | NZ_CP040635.1 | Acidipropionibacterium jensenii |
| 305 | 276801 | 276935 | + | NZ_CP011366.1 | Salinicoccus halodurans |
| 306 | 2146817 | 2146951 | - | NZ_CP012047.1 | Tetragenococcus halophilus |
| 307 | 1850821 | 1850949 | - | NZ_LT593929.1 | Propionibacterium freudenreichii |
| 308 | 2716615 | 2716737 | - | NZ_CP009577.1 | Listeria ivanovii subsp. ivanovii |
| 309 | 2993448 | 2993588 | + | NZ_CP047156.1 | Epidermidibacterium keratini |
| 310 | 2601048 | 2601179 | - | NZ_LT906444.1 | Listeria welshimeri |
| 311 | 1352183 | 1352320 | + | NZ_CP038810.1 | Flavobacterium sangjuense |
| 312 | 2717451 | 2717570 | - | NZ_CP015453.1 | Dietzia psychralcaliphila |
| 313 | 2590730 | 2590861 | - | NC_013891.1 | Listeria seeligeri serovar 1/2b str. SLCC3954 |
| 314 | 2695476 | 2695607 | - | NC_003210.1 | Listeria monocytogenes EGD-e |
| 315 | 2523600 | 2523719 | - | NZ_CP015449.1 | Dietzia lutea |
| 316 | 1073229 | 1073387 | + | NZ_CP025198.1 | Acidipropionibacterium virtanenii |
| 317 | 342941 | 343057 | + | NZ_CP030777.1 | Faecalibacterium prausnitzii |
| 318 | 639384 | 639527 | - | NC_019776.1 | Cyanobacterium aponinum PCC 10605 |
| 319 | 2858525 | 2858662 | - | NZ_CP011502.1 | Aeromicrobium erythreum |
| 320 | 6221990 | 6222151 | - | NZ_AP018920.1 | Pseudonocardia autotrophica |
| 321 | 2424291 | 2424413 | - | NZ_AP022822.1 | Enterococcus saigonensis |
| 322 | 3315769 | 3315897 | - | NZ_CP043661.1 | Kribbella qitaiheensis |
| 323 | 580190 | 580324 | - | NZ_CP023011.2 | Enterococcus hirae |
| 324 | 6556323 | 6556451 | - | NC_013729.1 | Kribbella flavida DSM 17836 |
| 325 | 3090190 | 3090318 | - | NC_014958.1 | Deinococcus maricopensis DSM 21211 |
| 326 | 3167784 | 3167918 | + | NZ_CP018061.1 | Enterococcus mundtii |
| 327 | 637375 | 637506 | + | NC_014165.1 | Thermobispora bispora DSM 43833 |
| 328 | 1326832 | 1326972 | + | NC_023151.1 | Thermotoga maritima MSB8 |
| 329 | 76814 | 76948 | + | NZ_CP023074.1 | Enterococcus thailandicus |
| 330 | 430082 | 430210 | + | NZ_CP060789.1 | Tessaracoccus defluvii |
| 331 | 1873391 | 1873525 | - | NZ_CP019606.1 | Tessaracoccus aquimaris |
| 332 | 72414 | 72548 | + | NC_020207.1 | Enterococcus faecium ATCC 8459 = NRRL B-2354 |
| 333 | 79521 | 79655 | + | NZ_CP065211.1 | Enterococcus lactis |
| 334 | 5768240 | 5768377 | - | NZ_CP022753.1 | Nocardiopsis gilva YIM 90087 |
| 335 | 605957 | 606091 | - | NZ_CP019607.1 | Tessaracoccus flavescens |
| 336 | 5214797 | 5214946 | - | NC_009767.1 | Roseiflexus castenholzii DSM 13941 |
| 337 | 953965 | 954096 | + | NZ_CP045572.1 | Nonomuraea nitratireducens |
| 338 | 117070 | 117201 | + | NZ_CP019573.1 | Abyssicoccus albus |
| 339 | 1222523 | 1222651 | + | NC_015635.1 | Microlunatus phosphovorus NM-1 |
| 340 | 2542673 | 2542825 | - | NC_013204.1 | Eggerthella lenta DSM 2243 |
| 341 | 345365 | 345505 | + | NC_012778.1 | [Eubacterium] eligens ATCC 27750 |
| 342 | 3670445 | 3670564 | - | NC_011831.1 | Chloroflexus aggregans DSM 9485 |
| 343 | 666665 | 666793 | + | NZ_CP014991.1 | Helicobacter himalayensis |
| 344 | 6607063 | 6607200 | + | NZ_CP045096.1 | Streptomyces phaeolivaceus |
| 345 | 809217 | 809342 | - | NZ_CP014163.1 | Aerococcus urinaehominis |
| 346 | 2206881 | 2207021 | - | NC_015673.1 | Corynebacterium resistens DSM 45100 |
| 347 | 992878 | 993018 | + | NC_011978.1 | Thermotoga neapolitana DSM 4359 |
| 348 | 245568 | 245702 | + | NZ_LS483306.1 | Enterococcus cecorum |
| 349 | 169598 | 169735 | - | NZ_CP028811.1 | Flavobacterium magnum |
| 350 | 161112 | 161249 | - | NZ_CP029187.1 | Flavobacterium pallidum |
| 351 | 4148735 | 4148872 | - | NC_013929.1 | Streptomyces scabiei 87.22 |
| 352 | 2707496 | 2707630 | - | NZ_CP031264.1 | Streptacidiphilus bronchialis |
| 353 | 4576433 | 4576570 | + | NZ_CP031742.1 | Streptomyces koyangensis |
| 354 | 237175 | 237309 | - | NZ_LT996886.1 | Tessaracoccus timonensis |
| 355 | 4063558 | 4063698 | + | NZ_CP029188.1 | Streptomyces tirandamycinicus |
| 356 | 4291236 | 4291376 | + | NZ_CP029254.1 | Streptomyces spongiicola |
| 357 | 4869018 | 4869164 | + | NZ_LR134501.1 | Nocardiopsis dassonvillei |
| 358 | 4604335 | 4604469 | - | NZ_CP070326.1 | Streptomyces noursei |
| 359 | 2742219 | 2742359 | - | NZ_CP031194.1 | Streptomyces paludis |
| 360 | 3956805 | 3956939 | - | NZ_CP023691.1 | Streptomyces platensis |
| 361 | 3864242 | 3864376 | - | NZ_CP019457.1 | Streptomyces lydicus |
| 362 | 4755382 | 4755522 | + | NZ_CP042266.1 | Streptomyces qinzhouensis |
| 363 | 4202818 | 4202952 | - | NZ_CP020569.1 | Streptomyces gilvosporeus |
| 364 | 3043275 | 3043415 | - | NZ_CP023702.1 | Streptomyces nitrosporeus |
| 365 | 3473144 | 3473278 | - | NZ_CP072931.1 | Streptomyces auratus AGR0001 |
| 366 | 3323356 | 3323496 | - | NC_010572.1 | Streptomyces griseus subsp. griseus NBRC 13350 |
| 367 | 4890917 | 4891057 | + | NZ_CP020700.1 | Streptomyces tsukubensis |
| 368 | 4659932 | 4660072 | + | NZ_CP024957.1 | Streptomyces cavourensis |
| 369 | 3719754 | 3719894 | - | NZ_CP011340.1 | Streptomyces pristinaespiralis |
| 370 | 5211145 | 5211279 | + | NZ_CP023688.1 | Streptomyces rimosus |
| 371 | 2630914 | 2631054 | - | NZ_CP065253.1 | Streptomyces clavuligerus |
| 372 | 831027 | 831167 | + | NZ_CP051486.1 | Streptomyces pratensis |
| 373 | 4995944 | 4996084 | + | NZ_CP020563.1 | Kitasatospora albolonga |
| 374 | 4967375 | 4967515 | + | NC_021177.1 | Streptomyces fulvissimus DSM 40593 |
| 375 | 4884064 | 4884204 | + | NZ_CP070242.1 | Streptomyces californicus |
| 376 | 4943869 | 4944009 | + | NZ_CP020570.1 | Streptomyces violaceoruber |
| 377 | 2929169 | 2929312 | - | NZ_CP023202.1 | Streptomyces xinghaiensis S187 |
| 378 | 918260 | 918391 | + | NC_015671.1 | Cellulomonas gilvus ATCC 13127 |
| 379 | 585687 | 585821 | + | NZ_CP013290.1 | Janibacter indicus |
| 380 | 2067709 | 2067840 | - | NZ_CP054938.1 | Streptomyces harbinensis |
| 381 | 2239709 | 2239840 | - | NZ_CP009922.3 | Streptomyces xiamenensis |
| 382 | 2225442 | 2225573 | + | NZ_AP019307.1 | Nocardioides baekrokdamisoli |
| 383 | 2123413 | 2123553 | + | NZ_LT906481.1 | Corynebacterium urealyticum |
| 384 | 1959961 | 1960098 | - | NZ_CP033898.1 | Corynebacterium pseudopelargi |
| 385 | 1971507 | 1971644 | - | NZ_CP035299.1 | Corynebacterium pelargi |
| 386 | 1881421 | 1881558 | - | NZ_CP033897.1 | Corynebacterium gerontici |
| 387 | 970031 | 970156 | + | NZ_CP014159.1 | Aerococcus christensenii |
| 388 | 1339485 | 1339631 | + | NC_004917.1 | Helicobacter hepaticus ATCC 51449 |
| 389 | 1516611 | 1516736 | - | NZ_CP014161.1 | Aerococcus urinae |
| 390 | 423258 | 423371 | + | NZ_CP026947.1 | Corynebacterium yudongzhengii |
| 391 | 297733 | 297870 | - | NC_014643.1 | Rothia dentocariosa ATCC 17931 |
| 392 | 1388665 | 1388826 | + | NZ_CP015963.1 | Altererythrobacter ishigakiensis |
| 393 | 5633514 | 5633636 | + | NZ_CP054698.1 | Nostoc edaphicum CCNP1411 |
| 394 | 4006087 | 4006209 | + | NZ_CP031941.1 | Nostoc sphaeroides |
| 395 | 6154487 | 6154609 | + | NZ_CP024785.1 | Nostoc flagelliforme CCNUN1 |
| 396 | 642433 | 642561 | + | NZ_CP009761.1 | Parvimonas micra |
| 397 | 3444120 | 3444251 | - | NZ_CP010836.1 | Sphingomonas hengshuiensis |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_008346.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00347.25 | 0.81 | 320 | 2778 | same-strand | Ribosomal protein L6 |
| 2 | PF00861.24 | 0.81 | 322 | 2383 | same-strand | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast |
| 3 | PF00333.22 | 0.82 | 323 | 1854.5 | same-strand | Ribosomal protein S5, N-terminal domain |
| 4 | PF03719.17 | 0.81 | 322 | 1854 | same-strand | Ribosomal protein S5, C-terminal domain |
| 5 | PF00327.22 | 0.73 | 291 | 1668.0 | same-strand | Ribosomal protein L30p/L7e |
| 6 | PF00828.21 | 0.83 | 328 | 1185 | same-strand | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A |
| 7 | PF00406.24 | 0.82 | 324 | 14 | same-strand | Adenylate kinase |
| 8 | PF13207.8 | 0.82 | 324 | 14 | same-strand | AAA domain |
| 9 | PF13671.8 | 0.65 | 258 | 3 | same-strand | AAA domain |
| 10 | PF01176.21 | 0.76 | 299 | 1600.5 | same-strand | Translation initiation factor 1A / IF-1 |
| 11 | PF13238.8 | 0.61 | 243 | 0 | same-strand | AAA domain |
| 12 | PF00557.26 | 0.7 | 278 | 661.5 | same-strand | Metallopeptidase family M24 |
++ More..