Result : EXP02553
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP02553 |
| NCBI Accession ID | |
| Organism | Faecalibacterium |
| Left | |
| Right | |
| Strand | |
| Nucleotide Sequence | ATGCCGGAGCTGCTGGGCATCTGTGACCGCGTACTGGTATTGAGCAGCGGCCATCTGACCGGAGAGTATGATCTGGTCCATGACCGTGAACACGCTACCCAGGAAAATATCATGGTGGATGCCACCAAGTTCGTCTGA |
| Sequence | MPELLGICDRVLVLSSGHLTGEYDLVHDREHATQENIMVDATKFV |
| Source of smORF | Metagenomic Ribo-seq |
| Function | |
| Pubmed ID | 32601270 |
| Domain | |
| Functional Category | Function not yet assigned |
| Uniprot ID | |
| ORF Length (Amino Acid) | 45 |
++ More..
| Conservation Analysis |
No. of Species: 174
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1919645 | 1919770 | - | NZ_CP070062.1 | Coprococcus comes |
| 2 | 2761619 | 2761744 | - | NC_010001.1 | Lachnoclostridium phytofermentans ISDg |
| 3 | 1520386 | 1520508 | - | NZ_CP032364.1 | Lachnoanaerobaculum umeaense |
| 4 | 3587298 | 3587423 | + | NC_015578.1 | Treponema primitia ZAS-2 |
| 5 | 189283 | 189408 | + | NZ_CP019728.1 | Jeotgalibaca dankookensis |
| 6 | 1748828 | 1748953 | - | NZ_CP016786.1 | Clostridium isatidis |
| 7 | 1059461 | 1059577 | + | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 8 | 1076427 | 1076540 | + | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 9 | 2072269 | 2072415 | + | NZ_CP023445.1 | Actinosynnema pretiosum |
| 10 | 2666087 | 2666227 | + | NZ_CP018139.1 | Halomonas aestuarii |
| 11 | 2521178 | 2521291 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 12 | 2059838 | 2059984 | + | NC_013093.1 | Actinosynnema mirum DSM 43827 |
| 13 | 3566272 | 3566412 | - | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 14 | 2582517 | 2582636 | - | NZ_AP022870.1 | Phytohabitans flavus |
| 15 | 1027406 | 1027531 | + | NZ_LT990039.1 | Massilistercora timonensis |
| 16 | 1009999 | 1010139 | - | NZ_LT990039.1 | Massilistercora timonensis |
| 17 | 2000670 | 2000798 | - | NZ_LT906477.1 | Clostridium cochlearium |
| 18 | 181952 | 182086 | - | NC_014633.1 | Ilyobacter polytropus DSM 2926 |
| 19 | 2824124 | 2824273 | + | NZ_CP019606.1 | Tessaracoccus aquimaris |
| 20 | 2202988 | 2203128 | + | NZ_CP011491.1 | Mycolicibacterium vaccae 95051 |
| 21 | 2044896 | 2045018 | - | NZ_CP014167.1 | Paenibacillus yonginensis |
| 22 | 923013 | 923129 | + | NZ_CP014167.1 | Paenibacillus yonginensis |
| 23 | 3534562 | 3534678 | - | NZ_CP014167.1 | Paenibacillus yonginensis |
| 24 | 778863 | 779003 | - | NZ_CP023671.1 | Clostridium septicum |
| 25 | 292101 | 292229 | - | NZ_CP007142.1 | Gynuella sunshinyii YC6258 |
| 26 | 1947395 | 1947517 | - | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 27 | 1908780 | 1908905 | - | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 28 | 1925381 | 1925521 | - | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 29 | 741213 | 741353 | + | NZ_CP027286.1 | Clostridium chauvoei |
| 30 | 253293 | 253451 | + | NC_013757.1 | Geodermatophilus obscurus DSM 43160 |
| 31 | 1254432 | 1254557 | + | NZ_CP014204.2 | Clostridium baratii |
| 32 | 1753114 | 1753275 | - | NC_020453.1 | Bradyrhizobium oligotrophicum S58 |
| 33 | 8217042 | 8217188 | + | NZ_CP016793.1 | Lentzea guizhouensis |
| 34 | 2055213 | 2055344 | - | NZ_CP014150.1 | Paeniclostridium sordellii |
| 35 | 4715478 | 4715615 | + | NZ_CP033433.1 | Cohnella candidum |
| 36 | 3664398 | 3664547 | + | NZ_CP008953.1 | Amycolatopsis japonica |
| 37 | 2628177 | 2628329 | + | NZ_CP034550.1 | Saccharothrix syringae |
| 38 | 1052390 | 1052512 | - | NZ_CP045295.1 | Paenibacillus cellulositrophicus |
| 39 | 7434681 | 7434791 | + | NZ_CP010849.1 | Streptomyces cyaneogriseus subsp. noncyanogenus |
| 40 | 668398 | 668508 | - | NZ_LN831790.1 | Streptomyces leeuwenhoekii |
| 41 | 1906336 | 1906452 | + | NC_016633.1 | Sphaerochaeta pleomorpha str. Grapes |
| 42 | 2590931 | 2591041 | - | NZ_CP034248.1 | Paenibacillus lentus |
| 43 | 3413952 | 3414068 | + | NZ_CP034248.1 | Paenibacillus lentus |
| 44 | 1123141 | 1123257 | - | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 45 | 1564939 | 1565079 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 46 | 1670580 | 1670705 | + | NZ_CP048103.1 | Kroppenstedtia eburnea |
| 47 | 3417001 | 3417126 | - | NZ_LR134340.1 | Escherichia marmotae |
| 48 | 163158 | 163274 | - | NZ_LT556085.1 | Citrobacter amalonaticus |
| 49 | 6093978 | 6094088 | - | NZ_CP009287.1 | Paenibacillus graminis |
| 50 | 4561646 | 4561768 | - | NZ_CP009287.1 | Paenibacillus graminis |
| 51 | 7072613 | 7072723 | - | NZ_CP009285.1 | Paenibacillus borealis |
| 52 | 2374102 | 2374218 | + | NZ_CP009285.1 | Paenibacillus borealis |
| 53 | 5204311 | 5204433 | - | NZ_CP009285.1 | Paenibacillus borealis |
| 54 | 129842 | 129970 | + | NC_014392.1 | Caldicellulosiruptor obsidiansis OB47 |
| 55 | 118390 | 118503 | + | NC_014392.1 | Caldicellulosiruptor obsidiansis OB47 |
| 56 | 6585962 | 6586072 | - | NZ_AP023440.1 | Streptomyces glomeroaurantiacus |
| 57 | 1915930 | 1916067 | + | NC_008148.1 | Rubrobacter xylanophilus DSM 9941 |
| 58 | 985843 | 985983 | + | NC_008148.1 | Rubrobacter xylanophilus DSM 9941 |
| 59 | 8431151 | 8431297 | - | NZ_CP045572.1 | Nonomuraea nitratireducens |
| 60 | 918661 | 918804 | + | NZ_CP039710.1 | Thermoactinomyces vulgaris |
| 61 | 546489 | 546617 | + | NZ_LS483423.1 | Jonesia denitrificans |
| 62 | 78162 | 78290 | + | NC_014657.1 | Caldicellulosiruptor owensensis OL |
| 63 | 2052532 | 2052654 | - | NC_014657.1 | Caldicellulosiruptor owensensis OL |
| 64 | 70010 | 70123 | + | NC_014657.1 | Caldicellulosiruptor owensensis OL |
| 65 | 2514546 | 2514677 | - | NZ_CP018845.1 | Herbaspirillum robiniae |
| 66 | 322159 | 322275 | + | NZ_CP054614.1 | Paenibacillus barcinonensis |
| 67 | 2090108 | 2090245 | - | NZ_AP018712.1 | Tepiditoga spiralis |
| 68 | 4344949 | 4345065 | + | NZ_CP038469.1 | Citrobacter tructae |
| 69 | 2731710 | 2731850 | - | NZ_FO082820.1 | Pseudorhizobium banfieldiae |
| 70 | 6120377 | 6120508 | - | NZ_CP036274.1 | Anatilimnocola aggregata |
| 71 | 359994 | 360131 | - | NC_015577.1 | Treponema azotonutricium ZAS-9 |
| 72 | 6496765 | 6496884 | - | NZ_CP012150.1 | Mycobacterium goodii |
| 73 | 1721480 | 1721596 | - | NZ_CP033744.1 | Citrobacter freundii |
| 74 | 2088542 | 2088655 | - | NC_011899.1 | Halothermothrix orenii H 168 |
| 75 | 5876250 | 5876390 | + | NZ_CP016809.1 | Paenibacillus ihbetae |
| 76 | 3009193 | 3009309 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 77 | 6148163 | 6148303 | - | NZ_CP020104.1 | Spirosoma aerolatum |
| 78 | 1102302 | 1102448 | + | NZ_CP019437.1 | Thioclava nitratireducens |
| 79 | 705508 | 705648 | + | NC_015519.1 | Tepidanaerobacter acetatoxydans Re1 |
| 80 | 7836462 | 7836584 | - | NC_017672.3 | Paenibacillus mucilaginosus K02 |
| 81 | 713290 | 713421 | + | NC_014652.1 | Caldicellulosiruptor hydrothermalis 108 |
| 82 | 1419641 | 1419772 | + | NZ_CP012621.1 | Zobellella denitrificans |
| 83 | 5205272 | 5205412 | - | NZ_CP045298.1 | Paenibacillus brasilensis |
| 84 | 2589617 | 2589757 | + | NZ_CP020028.1 | Paenibacillus kribbensis |
| 85 | 5037590 | 5037739 | - | NZ_CP016174.1 | Amycolatopsis orientalis |
| 86 | 345546 | 345686 | + | NZ_CP007490.1 | Rhodoluna lacicola |
| 87 | 1555296 | 1555433 | + | NZ_CP016843.1 | Carnobacterium divergens |
| 88 | 2180462 | 2180602 | - | NZ_CP014136.1 | Gibbsiella quercinecans |
| 89 | 504576 | 504707 | - | NZ_AP018437.1 | Pelolinea submarina |
| 90 | 1141082 | 1141225 | + | NZ_AP018437.1 | Pelolinea submarina |
| 91 | 3760217 | 3760348 | - | NZ_CP064338.1 | Schlegelella thermodepolymerans |
| 92 | 2871723 | 2871848 | - | NC_014364.1 | Sediminispirochaeta smaragdinae DSM 11293 |
| 93 | 153971 | 154093 | + | NC_015500.1 | Treponema brennaborense DSM 12168 |
| 94 | 2897186 | 2897326 | - | NZ_LR723670.1 | Pseudorhizobium flavum |
| 95 | 867519 | 867653 | + | NZ_CP053562.1 | Thioclava electrotropha |
| 96 | 1816233 | 1816346 | + | NZ_LR214441.1 | Tessaracoccus lapidicaptus |
| 97 | 906330 | 906470 | - | NZ_CP034998.1 | Rhizobium acidisoli |
| 98 | 1630032 | 1630169 | + | NZ_CP007230.1 | Yersinia similis |
| 99 | 4175279 | 4175401 | - | NZ_CP061081.1 | Marinomonas arctica |
| 100 | 123202 | 123321 | + | NZ_CP029358.1 | Azospirillum thermophilum |
| 101 | 4099591 | 4099731 | + | NZ_LT603683.1 | Bacillus glycinifermentans |
| 102 | 3290009 | 3290152 | - | NZ_CP013652.1 | Paenibacillus naphthalenovorans |
| 103 | 5702316 | 5702429 | - | NZ_AP022598.1 | Mycolicibacterium parafortuitum |
| 104 | 1534835 | 1534960 | - | NZ_CP029256.1 | Christensenella minuta |
| 105 | 1205389 | 1205511 | - | NZ_CP029256.1 | Christensenella minuta |
| 106 | 2069548 | 2069661 | - | NZ_CP029256.1 | Christensenella minuta |
| 107 | 4264705 | 4264851 | + | NZ_CP006569.1 | Sodalis praecaptivus |
| 108 | 1693934 | 1694056 | - | NZ_CP070273.1 | Marinomonas foliarum |
| 109 | 2613513 | 2613632 | + | NZ_LR130778.1 | Petrocella atlantisensis |
| 110 | 578277 | 578390 | - | NZ_CP061336.1 | Ruminiclostridium herbifermentans |
| 111 | 1779367 | 1779489 | + | NC_022571.1 | Clostridium saccharobutylicum DSM 13864 |
| 112 | 3993583 | 3993723 | - | NC_022571.1 | Clostridium saccharobutylicum DSM 13864 |
| 113 | 4542939 | 4543061 | - | NZ_CP011803.1 | Clostridium carboxidivorans P7 |
| 114 | 1817501 | 1817629 | - | NC_008593.1 | Clostridium novyi NT |
| 115 | 338697 | 338837 | + | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 116 | 4060266 | 4060388 | - | NZ_CP045201.1 | Pseudopuniceibacterium antarcticum |
| 117 | 5397132 | 5397254 | - | NZ_CP020953.1 | Clostridium drakei |
| 118 | 3533132 | 3533266 | + | NZ_CP021850.1 | Pseudoclostridium thermosuccinogenes |
| 119 | 3713734 | 3713856 | - | NZ_CP054301.1 | Marinomonas primoryensis |
| 120 | 2487245 | 2487373 | - | NZ_CP024645.1 | Rhizobacter gummiphilus |
| 121 | 5931273 | 5931389 | - | NZ_CP036298.1 | Aureliella helgolandensis |
| 122 | 2244782 | 2244901 | + | NZ_CP029642.1 | Arthrobacter dokdonellae |
| 123 | 1254747 | 1254857 | + | NZ_CP032698.1 | Streptomyces hundungensis |
| 124 | 3672163 | 3672303 | + | NC_006270.3 | Bacillus licheniformis DSM 13 = ATCC 14580 |
| 125 | 144986 | 145108 | - | NZ_CP015231.1 | Epibacterium mobile F1926 |
| 126 | 2632549 | 2632683 | - | NC_004193.1 | Oceanobacillus iheyensis HTE831 |
| 127 | 3870990 | 3871130 | + | NZ_CP023665.1 | Bacillus paralicheniformis |
| 128 | 3385114 | 3385236 | - | NZ_CP024848.1 | Oceanobacillus zhaokaii |
| 129 | 4524264 | 4524386 | + | NZ_CP009933.1 | Clostridium scatologenes |
| 130 | 1054158 | 1054295 | + | NZ_CP017194.1 | Lactococcus carnosus |
| 131 | 2018859 | 2018999 | - | NZ_CP043404.1 | Bacillus safensis |
| 132 | 646689 | 646823 | + | NC_014614.1 | Acetoanaerobium sticklandii |
| 133 | 3705026 | 3705163 | + | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 134 | 847929 | 848057 | + | NZ_CP011797.1 | Reinekea forsetii |
| 135 | 4441011 | 4441142 | + | NZ_CP031467.1 | Paraburkholderia caffeinilytica |
| 136 | 3964328 | 3964459 | + | NZ_CP047242.1 | Trichormus variabilis 0441 |
| 137 | 3068115 | 3068234 | - | NZ_LR131272.1 | Arthrobacter agilis |
| 138 | 1504072 | 1504203 | - | NZ_CP016616.1 | Microvirga ossetica |
| 139 | 5391866 | 5392012 | - | NZ_CP016616.1 | Microvirga ossetica |
| 140 | 4597140 | 4597262 | - | NC_022524.1 | Bacillus infantis NRRL B-14911 |
| 141 | 2077547 | 2077687 | - | NZ_CP017786.1 | Bacillus xiamenensis |
| 142 | 912320 | 912457 | + | NZ_CP024035.1 | Priestia aryabhattai |
| 143 | 1834102 | 1834254 | + | NZ_AP022593.1 | Mycolicibacterium arabiense |
| 144 | 7289001 | 7289138 | - | NZ_CP036275.1 | Maioricimonas rarisocia |
| 145 | 2390547 | 2390666 | - | NZ_AP012326.1 | Bifidobacterium dentium JCM 1195 = DSM 20436 |
| 146 | 1315598 | 1315720 | + | NZ_CP065915.1 | Pelagovum pacificum |
| 147 | 1437736 | 1437876 | + | NZ_CP014342.1 | Geobacillus subterraneus |
| 148 | 788839 | 788964 | - | NZ_CP040924.1 | Clostridium thermarum |
| 149 | 2768861 | 2768980 | + | NC_015675.1 | Mesorhizobium opportunistum WSM2075 |
| 150 | 2711944 | 2712075 | - | NZ_CP028105.1 | Fusobacterium ulcerans |
| 151 | 2318154 | 2318291 | + | NZ_CP027793.1 | Rhodococcus hoagii |
| 152 | 1137300 | 1137425 | + | NZ_LR027880.1 | Roseburia intestinalis L1-82 |
| 153 | 2245247 | 2245369 | + | NC_015730.1 | Roseobacter litoralis Och 149 |
| 154 | 2109768 | 2109890 | - | NZ_CP014334.1 | Fervidobacterium islandicum |
| 155 | 303544 | 303672 | - | NZ_CP029553.1 | Methylobacterium terrae |
| 156 | 187185 | 187316 | + | NC_019729.1 | Oscillatoria nigro-viridis PCC 7112 |
| 157 | 5111943 | 5112074 | - | NZ_CP011058.1 | Paenibacillus beijingensis |
| 158 | 2234776 | 2234898 | + | NZ_CP060436.1 | Pseudooceanicola algae |
| 159 | 5254575 | 5254703 | - | NZ_AP019400.1 | Cohnella abietis |
| 160 | 246601 | 246723 | + | NC_009437.1 | Caldicellulosiruptor saccharolyticus DSM 8903 |
| 161 | 2507525 | 2507638 | + | NZ_CP036401.1 | Massilia albidiflava |
| 162 | 4039400 | 4039522 | - | NZ_CP015756.1 | Clostridium estertheticum subsp. estertheticum |
| 163 | 1223042 | 1223194 | + | NZ_CP041185.1 | Janthinobacterium tructae |
| 164 | 1209204 | 1209326 | - | NZ_CP012023.1 | Celeribacter marinus |
| 165 | 204671 | 204793 | - | NZ_CP018171.1 | Mesorhizobium oceanicum |
| 166 | 3869415 | 3869546 | - | NZ_CP019239.1 | Rhodoferax saidenbachensis |
| 167 | 2482145 | 2482276 | + | NZ_CP049801.1 | Acinetobacter shaoyimingii |
| 168 | 6503507 | 6503629 | - | NZ_CP048429.1 | Paenibacillus jilunlii |
| 169 | 1505599 | 1505739 | - | NZ_CP012152.1 | Anoxybacillus gonensis |
| 170 | 2373884 | 2374006 | - | NZ_CP045293.1 | Paenibacillus guangzhouensis |
| 171 | 4261686 | 4261826 | + | NZ_AP014638.1 | Leptolyngbya boryana IAM M-101 |
| 172 | 2044163 | 2044276 | - | NZ_CP040017.1 | Massilia umbonata |
| 173 | 3768592 | 3768714 | - | NZ_CP015839.1 | Marinobacterium aestuarii |
| 174 | 5927671 | 5927784 | - | NZ_CP017641.1 | Fuerstia marisgermanicae |
| 175 | 755274 | 755396 | - | NC_015703.1 | Runella slithyformis DSM 19594 |
| 176 | 3377942 | 3378064 | - | NZ_CP004078.1 | Paenibacillus sabinae T27 |
| 177 | 7050277 | 7050399 | - | NZ_CP050063.1 | Spirosoma aureum |
| 178 | 3259283 | 3259399 | - | NC_017079.1 | Caldilinea aerophila DSM 14535 = NBRC 104270 |
| 179 | 4297178 | 4297291 | + | NZ_CP019038.1 | Massilia putida |
| 180 | 1671122 | 1671244 | - | NZ_CP066065.1 | Schaalia meyeri |
| 181 | 5041055 | 5041177 | - | NZ_LT960614.1 | Hartmannibacter diazotrophicus |
| 182 | 736205 | 736339 | - | NZ_CP005973.1 | Photobacterium gaetbulicola Gung47 |
| 183 | 3594130 | 3594255 | - | NZ_AP017312.1 | Aneurinibacillus soli |
| 184 | 377178 | 377303 | + | NC_013515.1 | Streptobacillus moniliformis DSM 12112 |
| 185 | 1171054 | 1171170 | - | NZ_CP014262.1 | Pseudomonas corrugata |
| 186 | 1744987 | 1745130 | - | NZ_CP010429.1 | Spirosoma radiotolerans |
| 187 | 207607 | 207726 | + | NZ_CP012502.1 | Bacillus beveridgei |
| 188 | 7137854 | 7137991 | + | NZ_CP025096.1 | Spirosoma pollinicola |
| 189 | 5461841 | 5461978 | + | NZ_CP014263.1 | Spirosoma montaniterrae |
| 190 | 1016675 | 1016800 | - | NZ_CP053988.1 | Abiotrophia defectiva |
| 191 | 177106 | 177216 | + | NC_014014.1 | Mycoplasma crocodyli MP145 |
| 192 | 1274710 | 1274844 | - | NZ_CP065729.1 | Macrococcus caseolyticus |
| 193 | 383139 | 383258 | - | NC_016630.1 | Filifactor alocis ATCC 35896 |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP070062.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF02653.18 | 0.98 | 170 | 14 | same-strand | Branched-chain amino acid transport system / permease component |
| 2 | PF13407.8 | 0.98 | 171 | 1514 | same-strand | Periplasmic binding protein domain |
++ More..