Result : B5RQC2
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Putative septation protein SpoVG |
| NCBI Accession ID | CP000993.1 |
| Organism | Borrelia recurrentis (strain A1) |
| Left | 844858 |
| Right | 845148 |
| Strand | + |
| Nucleotide Sequence | GTGAATATTACAAATGTAAGAATTAGGAGAGTTGATAATAAAGATTCCAGTTCGAAGCTATTAGCATATGTTACAGTTACTTTTGATGATTGCTTAGTTTTACATAATATCAGAGTTATTAGAGGGCAAAAAGGCGTGTTTATTGTTATGCCTAATAGGAGAACTAAAGTTGGAGAATATAAAGATATTGTTCATCCTATTAATCAAAGTTTTAGAGAAATTTTGCAAAGTGCTATTTTTAAAGAATATGTCAAAGAAAACCCTGCAAATTTTGAACTTGAATTAGTCTAG |
| Sequence | MNITNVRIRRVDNKDSSSKLLAYVTVTFDDCLVLHNIRVIRGQKGVFIVMPNRRTKVGEYKDIVHPINQSFREILQSAIFKEYVKENPANFELELV |
| Source of smORF | Swiss-Prot |
| Function | Could be involved in septation. {ECO:0000255|HAMAP-Rule:MF_00819}. |
| Pubmed ID | 18787695 |
| Domain | CDD:412646 |
| Functional Category | Others |
| Uniprot ID | B5RQC2 |
| ORF Length (Amino Acid) | 96 |
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| Conservation Analysis |
No. of Species: 66
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 844858 | 845148 | + | NC_011244.1 | Borrelia recurrentis A1 |
| 2 | 834404 | 834694 | + | NZ_CP011060.1 | Borrelia hermsii CC1 |
| 3 | 851147 | 851437 | + | NZ_CP028884.1 | Borrelia turcica IST7 |
| 4 | 820857 | 821147 | + | NZ_CP013704.1 | Borrelia anserina Es |
| 5 | 82723 | 83013 | - | NZ_CP024333.1 | Borrelia miyamotoi |
| 6 | 830583 | 830873 | + | NZ_CP007022.1 | Borrelia parkeri HR1 |
| 7 | 830734 | 831024 | + | NC_008710.1 | Borrelia turicatae 91E135 |
| 8 | 820355 | 820648 | + | NC_015921.1 | Borreliella bissettii DN127 |
| 9 | 820499 | 820792 | + | NZ_CP044535.1 | Borrelia maritima |
| 10 | 823717 | 824010 | + | NZ_CP015796.1 | Borreliella mayonii |
| 11 | 825618 | 825911 | + | NZ_CP028861.1 | Borreliella garinii |
| 12 | 1534541 | 1534825 | + | NC_023035.1 | Salinispira pacifica |
| 13 | 1958330 | 1958608 | - | NC_015385.1 | Treponema succinifaciens DSM 2489 |
| 14 | 2685432 | 2685713 | - | NC_015577.1 | Treponema azotonutricium ZAS-9 |
| 15 | 3110726 | 3111007 | + | NC_015578.1 | Treponema primitia ZAS-2 |
| 16 | 2147145 | 2147444 | - | NC_017098.1 | Spirochaeta africana DSM 8902 |
| 17 | 2099663 | 2099941 | + | NZ_CP031518.1 | Treponema ruminis |
| 18 | 3561041 | 3561319 | + | NZ_CP035807.1 | Thiospirochaeta perfilievii |
| 19 | 1128044 | 1128334 | - | NC_015436.1 | Sphaerochaeta coccoides DSM 17374 |
| 20 | 870308 | 870589 | + | NC_015732.1 | Treponema caldarium DSM 7334 |
| 21 | 1548111 | 1548398 | - | NZ_CP036150.1 | Oceanispirochaeta crateris |
| 22 | 1728060 | 1728347 | - | NZ_CP054142.1 | Treponema parvum |
| 23 | 2273415 | 2273681 | - | NC_014657.1 | Caldicellulosiruptor owensensis OL |
| 24 | 2332127 | 2332393 | - | NC_014392.1 | Caldicellulosiruptor obsidiansis OB47 |
| 25 | 2093829 | 2094119 | - | NC_015500.1 | Treponema brennaborense DSM 12168 |
| 26 | 4591589 | 4591867 | - | NC_014393.1 | Clostridium cellulovorans 743B |
| 27 | 3374577 | 3374864 | - | NC_015687.1 | Clostridium acetobutylicum DSM 1731 |
| 28 | 158631 | 158912 | + | NZ_CP016786.1 | Clostridium isatidis |
| 29 | 2170009 | 2170287 | - | NC_014209.1 | Thermoanaerobacter mathranii subsp. mathranii str. A3 |
| 30 | 2287459 | 2287737 | - | NC_013921.1 | Thermoanaerobacter italicus Ab9 |
| 31 | 174146 | 174424 | + | NC_014964.1 | Thermoanaerobacter brockii subsp. finnii Ako-1 |
| 32 | 2617192 | 2617470 | - | NC_015958.1 | Thermoanaerobacter wiegelii Rt8.B1 |
| 33 | 3450794 | 3451084 | - | NZ_CP040924.1 | Clostridium thermarum |
| 34 | 2209600 | 2209878 | - | NZ_CP009170.1 | Thermoanaerobacter kivui |
| 35 | 2873723 | 2874004 | - | NC_009922.1 | Alkaliphilus oremlandii OhILAs |
| 36 | 189753 | 190028 | + | NZ_CP014204.2 | Clostridium baratii |
| 37 | 2463420 | 2463695 | - | NC_003869.1 | Caldanaerobacter subterraneus subsp. tengcongensis MB4 |
| 38 | 3075372 | 3075644 | - | NC_008261.1 | Clostridium perfringens ATCC 13124 |
| 39 | 2474553 | 2474834 | - | NZ_CP047602.1 | Thermoanaerobacterium aotearoense |
| 40 | 2752391 | 2752678 | - | NZ_HG917868.1 | Clostridium bornimense |
| 41 | 153718 | 153999 | + | NC_015555.1 | Thermoanaerobacterium xylanolyticum LX-11 |
| 42 | 4013428 | 4013715 | - | NZ_CP013019.1 | Clostridium pasteurianum |
| 43 | 1936260 | 1936523 | - | NZ_CP035130.1 | Gudongella oleilytica |
| 44 | 2962234 | 2962521 | - | NZ_CP014170.1 | Clostridium tyrobutyricum |
| 45 | 2154012 | 2154302 | - | NZ_CP012395.1 | Clostridium autoethanogenum DSM 10061 |
| 46 | 4521242 | 4521532 | - | NC_014328.1 | Clostridium ljungdahlii DSM 13528 |
| 47 | 1448140 | 1448427 | - | NZ_CP029256.1 | Christensenella minuta |
| 48 | 135810 | 136100 | + | NC_011837.1 | Clostridium kluyveri NBRC 12016 |
| 49 | 3763771 | 3764058 | - | NZ_CP028842.1 | Clostridium botulinum |
| 50 | 4044792 | 4045079 | - | NZ_CP011663.1 | Clostridium sporogenes |
| 51 | 2350963 | 2351253 | - | NZ_LT906477.1 | Clostridium cochlearium |
| 52 | 188287 | 188568 | + | NC_014410.1 | Thermoanaerobacterium thermosaccharolyticum DSM 571 |
| 53 | 2724860 | 2725150 | - | NZ_CP032416.1 | Clostridium fermenticellae |
| 54 | 102620 | 102895 | + | NZ_CP043998.1 | Clostridium diolis |
| 55 | 112221 | 112496 | + | NC_020291.1 | Clostridium saccharoperbutylacetonicum N1-4(HMT) |
| 56 | 5372717 | 5373007 | - | NZ_CP020953.1 | Clostridium drakei |
| 57 | 4516057 | 4516347 | - | NZ_CP011803.1 | Clostridium carboxidivorans P7 |
| 58 | 4551455 | 4551745 | + | NZ_CP009933.1 | Clostridium scatologenes |
| 59 | 63412 | 63675 | + | NZ_CP021850.1 | Pseudoclostridium thermosuccinogenes |
| 60 | 540453 | 540740 | + | NZ_CP014176.1 | Clostridium argentinense |
| 61 | 2891609 | 2891893 | - | NZ_CP030280.1 | Blautia argi |
| 62 | 1919703 | 1919987 | + | NZ_CP023671.1 | Clostridium septicum |
| 63 | 155137 | 155421 | + | NZ_CP027286.1 | Clostridium chauvoei |
| 64 | 126929 | 127204 | + | NC_022571.1 | Clostridium saccharobutylicum DSM 13864 |
| 65 | 148197 | 148472 | + | NZ_CP017253.2 | Clostridium taeniosporum |
| 66 | 3625658 | 3625933 | - | NZ_CP030775.1 | Clostridium butyricum |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_014393.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF09182.12 | 0.62 | 41 | 128 | same-strand | Bacterial purine repressor, N-terminal |
| 2 | PF08245.14 | 0.62 | 41 | 1194 | opposite-strand | Mur ligase middle domain |
| 3 | PF01225.27 | 0.62 | 41 | 1194 | opposite-strand | Mur ligase family, catalytic domain |
| 4 | PF02875.23 | 0.62 | 41 | 1194 | opposite-strand | Mur ligase family, glutamate ligase domain |
| 5 | PF00132.26 | 0.62 | 41 | 160 | same-strand | Bacterial transferase hexapeptide (six repeats) |
| 6 | PF00483.25 | 0.62 | 41 | 160.0 | same-strand | Nucleotidyl transferase |
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