Result : B5EE44
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 30S ribosomal protein S20 |
| NCBI Accession ID | CP001124.1 |
| Organism | Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) |
| Left | 890273 |
| Right | 890536 |
| Strand | - |
| Nucleotide Sequence | TTGGCAAATCACAAATCGGCAATGAAAAGGATCAAGCAGACGGCTAAGAGAACGGAGCGCAACAAGCACGAACGTTCCACCCTGCGCACCTTCATCAAGCGCGTCCGCGAAGCGGTTGCCACCAAGGACCAGGAGGCTGCAAAGGCCGCTCTGGCTGTGGCCATCCCCGTCATTGACGGCGCTGCTACCAAGGGGATCATCCACTCCTCGAACGCTTCCAGGAACGTTTCCCGTCTCACCAAGCTGGTCAACACCCTGGGCTAA |
| Sequence | MANHKSAMKRIKQTAKRTERNKHERSTLRTFIKRVREAVATKDQEAAKAALAVAIPVIDGAATKGIIHSSNASRNVSRLTKLVNTLG |
| Source of smORF | Swiss-Prot |
| Function | Binds directly to 16S ribosomal RNA. {ECO:0000255|HAMAP-Rule:MF_00500}. |
| Pubmed ID | |
| Domain | CDD:412349 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | B5EE44 |
| ORF Length (Amino Acid) | 87 |
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| Conservation Analysis |
No. of Species: 167
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 903913 | 904176 | - | NZ_AP023213.1 | Citrifermentans bremense |
| 2 | 890273 | 890536 | - | NC_011146.1 | Citrifermentans bemidjiense Bem |
| 3 | 2411616 | 2411879 | - | NC_011979.1 | Geobacter daltonii FRC-32 |
| 4 | 2247195 | 2247458 | + | NC_010814.1 | Geobacter lovleyi SZ |
| 5 | 2269241 | 2269504 | + | NZ_CP009788.1 | Geobacter pickeringii |
| 6 | 2421034 | 2421297 | + | NC_002939.5 | Geobacter sulfurreducens PCA |
| 7 | 1903660 | 1903923 | + | NC_008609.1 | Pelobacter propionicus DSM 2379 |
| 8 | 3700429 | 3700692 | + | NC_009483.1 | Geobacter uraniireducens Rf4 |
| 9 | 532193 | 532456 | - | NZ_CP015519.1 | Syntrophotalea acetylenivorans |
| 10 | 1665315 | 1665578 | - | NZ_CP010311.1 | Geoalkalibacter subterraneus |
| 11 | 2604170 | 2604433 | + | NC_007517.1 | Geobacter metallireducens GS-15 |
| 12 | 1663855 | 1664118 | - | NC_007498.2 | Syntrophotalea carbinolica DSM 2380 |
| 13 | 2068982 | 2069245 | + | NZ_CP010802.1 | Desulfuromonas soudanensis |
| 14 | 1228996 | 1229259 | - | NZ_LR699011.1 | Roseburia hominis |
| 15 | 2992676 | 2992939 | + | NZ_LR027880.1 | Roseburia intestinalis L1-82 |
| 16 | 1111331 | 1111594 | - | NZ_LN879430.1 | Herbinix luporum |
| 17 | 1598250 | 1598522 | - | NC_014972.1 | Desulfobulbus propionicus DSM 2032 |
| 18 | 2049325 | 2049597 | + | NZ_CP054140.1 | Desulfobulbus oligotrophicus |
| 19 | 3680337 | 3680606 | + | NZ_LN606600.1 | Acetobacter senegalensis |
| 20 | 963775 | 964038 | + | NZ_AP017378.1 | Desulfovibrio ferrophilus |
| 21 | 5831670 | 5831936 | + | NZ_AP019700.1 | Stella humosa |
| 22 | 126554 | 126829 | - | NZ_CP017111.1 | Sulfurospirillum halorespirans DSM 13726 |
| 23 | 129052 | 129327 | - | NZ_CP007201.1 | Sulfurospirillum multivorans DSM 12446 |
| 24 | 4647969 | 4648235 | + | NC_015259.1 | Polymorphum gilvum SL003B-26A1 |
| 25 | 2744211 | 2744474 | + | NZ_CP030280.1 | Blautia argi |
| 26 | 17336 | 17599 | - | NZ_CP053848.1 | Campylobacter ornithocola |
| 27 | 775890 | 776153 | - | NZ_CP022413.2 | Blautia hansenii DSM 20583 |
| 28 | 41845 | 42117 | + | NZ_AP022826.1 | Nitrosophilus labii |
| 29 | 86877 | 87152 | - | NC_018002.1 | Sulfurospirillum barnesii SES-3 |
| 30 | 100231 | 100500 | + | NZ_CP053826.1 | Campylobacter curvus |
| 31 | 1195448 | 1195717 | - | NZ_CP042808.1 | Acetobacter oryzoeni |
| 32 | 1976 | 2245 | - | NC_021991.1 | Acetobacter pasteurianus 386B |
| 33 | 851534 | 851803 | - | NZ_CP015164.1 | Acetobacter ascendens |
| 34 | 1325514 | 1325783 | - | NZ_CP022374.1 | Acetobacter oryzifermentans |
| 35 | 3906739 | 3907008 | + | NZ_CP029176.1 | Acidibrevibacterium fodinaquatile |
| 36 | 14730 | 15002 | + | NZ_AP022847.1 | Nitrosophilus alvini |
| 37 | 81476 | 81745 | - | NZ_CP053841.1 | Campylobacter blaseri |
| 38 | 3315510 | 3315773 | - | NZ_CP070062.1 | Coprococcus comes |
| 39 | 573733 | 574008 | + | NZ_CP032694.1 | Rhizobium jaguaris |
| 40 | 1584105 | 1584371 | - | NC_014365.1 | Desulfarculus baarsii DSM 2075 |
| 41 | 1035246 | 1035515 | - | NZ_CP045504.1 | Desulfovibrio sulfodismutans DSM 3696 |
| 42 | 2275195 | 2275467 | - | NZ_CP012196.1 | Campylobacter gracilis |
| 43 | 1391430 | 1391696 | - | NZ_CP015578.1 | Campylobacter lanienae NCTC 13004 |
| 44 | 650266 | 650529 | - | NZ_CP063079.1 | Campylobacter peloridis |
| 45 | 187885 | 188154 | + | NC_007759.1 | Syntrophus aciditrophicus SB |
| 46 | 179 | 442 | + | NC_009719.1 | Parvibaculum lavamentivorans DS-1 |
| 47 | 491677 | 491961 | - | NZ_LR699119.1 | Aquicella siphonis |
| 48 | 16257 | 16520 | - | NZ_CP007770.1 | Campylobacter insulaenigrae NCTC 12927 |
| 49 | 1595432 | 1595695 | + | NZ_CP053825.1 | Campylobacter armoricus |
| 50 | 2540394 | 2540657 | - | NC_004757.1 | Nitrosomonas europaea ATCC 19718 |
| 51 | 35691 | 35963 | - | NZ_CP053842.1 | Campylobacter corcagiensis |
| 52 | 13998 | 14261 | - | NZ_CP007773.1 | Campylobacter subantarcticus LMG 24377 |
| 53 | 15553 | 15816 | - | NC_012039.1 | Campylobacter lari RM2100 |
| 54 | 15100 | 15363 | - | NZ_CP007774.1 | Campylobacter volucris LMG 24379 |
| 55 | 2118014 | 2118277 | + | NZ_CP011125.1 | Sandaracinus amylolyticus |
| 56 | 169687 | 169956 | + | NZ_CP012541.1 | Campylobacter concisus |
| 57 | 1682366 | 1682632 | + | NZ_CP059443.1 | Campylobacter fetus |
| 58 | 2096406 | 2096675 | + | NZ_CP011308.1 | Sulfurovum lithotrophicum |
| 59 | 4134012 | 4134290 | + | NZ_CP060009.1 | Pseudomonas sediminis |
| 60 | 3962818 | 3963096 | + | NZ_CP013124.1 | Pseudomonas mendocina S5.2 |
| 61 | 3440475 | 3440753 | - | NZ_CP070505.1 | Pseudomonas toyotomiensis |
| 62 | 1096640 | 1096918 | - | NZ_CP068551.1 | Pseudomonas khazarica |
| 63 | 1721124 | 1721390 | + | NZ_CP010995.1 | Campylobacter iguaniorum |
| 64 | 2545967 | 2546233 | + | NZ_CP023704.1 | Caldibacillus thermoamylovorans |
| 65 | 1332702 | 1332953 | + | NZ_CP038012.1 | Sporosarcina pasteurii |
| 66 | 1813527 | 1813796 | + | NZ_CP045508.1 | Desulfolutivibrio sulfoxidireducens |
| 67 | 2243711 | 2243977 | - | NZ_CP010803.1 | Martelella endophytica |
| 68 | 5394784 | 5395050 | + | NZ_CP039546.1 | Methylorubrum populi |
| 69 | 2338140 | 2338403 | - | NC_015275.1 | Cellulosilyticum lentocellum DSM 5427 |
| 70 | 849147 | 849425 | - | NZ_CP027723.1 | Pseudomonas orientalis |
| 71 | 1330132 | 1330401 | - | NC_008229.1 | Helicobacter acinonychis str. Sheeba |
| 72 | 75769 | 76038 | + | NC_017379.1 | Helicobacter pylori Puno135 |
| 73 | 2656392 | 2656667 | + | NZ_AP014724.1 | Sulfurospirillum cavolei |
| 74 | 2618986 | 2619264 | + | NZ_CP014262.1 | Pseudomonas corrugata |
| 75 | 1320348 | 1320614 | + | NZ_LR134374.1 | Legionella spiritensis |
| 76 | 1640163 | 1640423 | - | NZ_CP039126.1 | Blautia producta |
| 77 | 17039 | 17305 | + | NZ_CP053828.1 | Campylobacter hyointestinalis subsp. lawsonii |
| 78 | 1021977 | 1022249 | - | NZ_CP070503.1 | Pseudomonas atacamensis |
| 79 | 5612968 | 5613240 | + | NZ_CP062253.1 | Pseudomonas gozinkensis |
| 80 | 5634456 | 5634728 | + | NZ_CP062252.1 | Pseudomonas allokribbensis |
| 81 | 2924346 | 2924609 | + | NZ_CP014476.1 | Methylomonas denitrificans |
| 82 | 5963042 | 5963320 | + | NZ_CP051487.1 | Pseudomonas umsongensis |
| 83 | 5743428 | 5743706 | + | NZ_CP035088.1 | Pseudomonas viciae |
| 84 | 3083177 | 3083440 | + | NZ_AP023367.1 | Anaerocolumna cellulosilytica |
| 85 | 5805019 | 5805297 | + | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 86 | 5155333 | 5155611 | - | NZ_CP048810.1 | Pseudomonas bijieensis |
| 87 | 97115 | 97381 | + | NZ_CP012544.1 | Campylobacter showae |
| 88 | 2983972 | 2984232 | + | NZ_CP031769.1 | Salinimonas sediminis |
| 89 | 4646837 | 4647103 | + | NZ_HG938353.1 | Neorhizobium galegae bv. orientalis str. HAMBI 540 |
| 90 | 1586813 | 1587031 | + | NZ_CP016379.1 | Anoxybacter fermentans |
| 91 | 5413544 | 5413816 | + | NZ_CP029608.1 | Pseudomonas kribbensis |
| 92 | 5778002 | 5778274 | + | NZ_CP014205.2 | Pseudomonas glycinae |
| 93 | 2805369 | 2805635 | + | NZ_CP053856.1 | Rhizobium pusense |
| 94 | 5060038 | 5060307 | + | NZ_CP047698.1 | Pseudomonas knackmussii |
| 95 | 6110681 | 6110950 | + | NZ_CP048833.1 | Pseudomonas multiresinivorans |
| 96 | 1098386 | 1098655 | - | NZ_CP014158.1 | Pseudomonas citronellolis |
| 97 | 866573 | 866842 | - | NZ_CP012547.1 | Campylobacter pinnipediorum subsp. pinnipediorum |
| 98 | 4844654 | 4844932 | - | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 99 | 774078 | 774353 | - | NC_005090.1 | Wolinella succinogenes DSM 1740 |
| 100 | 3669740 | 3670003 | + | NC_015572.1 | Methylomonas methanica MC09 |
| 101 | 1680501 | 1680770 | + | NZ_CP053831.1 | Campylobacter mucosalis |
| 102 | 731570 | 731848 | - | NZ_CP014870.1 | Pseudomonas silesiensis |
| 103 | 2988497 | 2988763 | + | NZ_CP013742.1 | Legionella pneumophila |
| 104 | 5911837 | 5912115 | + | NZ_LS999205.1 | Pseudomonas protegens CHA0 |
| 105 | 758353 | 758625 | - | NC_017735.1 | Helicobacter cetorum MIT 99-5656 |
| 106 | 5892677 | 5892955 | + | NZ_CP061079.1 | Pseudomonas chlororaphis |
| 107 | 2762138 | 2762404 | + | NZ_CP025491.2 | Legionella sainthelensi |
| 108 | 3822096 | 3822362 | + | NZ_CP045423.1 | Microvirga thermotolerans |
| 109 | 652635 | 652913 | - | NZ_CP012400.2 | Pseudomonas yamanorum |
| 110 | 664699 | 664974 | - | NC_014810.2 | Helicobacter felis ATCC 49179 |
| 111 | 925332 | 925610 | - | NZ_CP018420.1 | Pseudomonas veronii |
| 112 | 5124912 | 5125190 | + | NZ_CP007039.1 | Pseudomonas cichorii JBC1 |
| 113 | 744080 | 744358 | - | NZ_CP042804.1 | Pseudomonas amygdali pv. tabaci str. ATCC 11528 |
| 114 | 3827086 | 3827352 | + | NZ_CP017703.1 | Aeribacillus pallidus |
| 115 | 829951 | 830229 | - | NZ_CP067022.1 | Pseudomonas cannabina pv. alisalensis |
| 116 | 867260 | 867538 | - | NC_004578.1 | Pseudomonas syringae pv. tomato str. DC3000 |
| 117 | 2418421 | 2418633 | - | NC_010337.2 | Heliomicrobium modesticaldum Ice1 |
| 118 | 1806488 | 1806748 | + | NC_013166.1 | Kangiella koreensis DSM 16069 |
| 119 | 838924 | 839202 | - | NZ_CP068034.2 | Pseudomonas syringae |
| 120 | 3313742 | 3314008 | + | NZ_LT906442.1 | Legionella waltersii |
| 121 | 1641457 | 1641717 | + | NZ_HG917868.1 | Clostridium bornimense |
| 122 | 567675 | 567941 | - | NZ_CP038254.1 | Legionella israelensis |
| 123 | 2502713 | 2502985 | + | NZ_CP011971.1 | Steroidobacter denitrificans |
| 124 | 3106612 | 3106878 | + | NC_013861.1 | Legionella longbeachae NSW150 |
| 125 | 680120 | 680380 | + | NZ_CP014223.1 | Anaerotignum propionicum DSM 1682 |
| 126 | 371368 | 371634 | + | NZ_CP013107.1 | Sinorhizobium americanum |
| 127 | 817601 | 817867 | - | NZ_CP049241.1 | Rhizobium pseudoryzae |
| 128 | 1734268 | 1734528 | - | NC_014393.1 | Clostridium cellulovorans 743B |
| 129 | 2956820 | 2957086 | + | NZ_CP014176.1 | Clostridium argentinense |
| 130 | 473282 | 473548 | + | NZ_CP041238.1 | Ensifer mexicanus |
| 131 | 1186836 | 1187102 | + | NZ_CP017147.1 | Bosea vaviloviae |
| 132 | 162961 | 163227 | + | NZ_LR134418.1 | Legionella adelaidensis |
| 133 | 1198786 | 1199058 | - | NZ_CP012332.1 | Vulgatibacter incomptus |
| 134 | 2820619 | 2820882 | + | NZ_CP008849.1 | Alteromonas australica |
| 135 | 3247659 | 3247931 | - | NC_020304.1 | Desulfocapsa sulfexigens DSM 10523 |
| 136 | 2464086 | 2464349 | + | NZ_CP009687.1 | Clostridium aceticum |
| 137 | 2829795 | 2830058 | + | NZ_CP046670.1 | Alteromonas mediterranea |
| 138 | 2649903 | 2650166 | + | NZ_CP020559.1 | Clostridium formicaceticum |
| 139 | 992228 | 992494 | - | NZ_LN614830.1 | Tatlockia micdadei |
| 140 | 278366 | 278632 | + | NZ_LR723670.1 | Pseudorhizobium flavum |
| 141 | 4239208 | 4239474 | + | NZ_FO082820.1 | Pseudorhizobium banfieldiae |
| 142 | 847902 | 848168 | - | NZ_LN681225.1 | Legionella hackeliae |
| 143 | 2125885 | 2126154 | + | NZ_CP063164.1 | Sulfurovum indicum |
| 144 | 194352 | 194618 | - | NZ_CP021330.1 | Maritalea myrionectae |
| 145 | 945424 | 945687 | - | NC_014376.1 | [Clostridium] saccharolyticum WM1 |
| 146 | 2176283 | 2176549 | + | NZ_LT906451.1 | Legionella lansingensis |
| 147 | 441730 | 441996 | + | NZ_CP044548.2 | Janibacter melonis |
| 148 | 2404683 | 2404949 | + | NZ_CP016397.1 | Legionella clemsonensis |
| 149 | 5512282 | 5512554 | + | NZ_CP012333.1 | Labilithrix luteola |
| 150 | 1172096 | 1172365 | - | NZ_CP033326.1 | Xanthomonas cucurbitae |
| 151 | 2071672 | 2071941 | + | NZ_CP016878.1 | Xanthomonas hortorum |
| 152 | 1028057 | 1028326 | - | NZ_LT853882.1 | Xanthomonas fragariae |
| 153 | 1462929 | 1463198 | - | NZ_CP028127.1 | Xanthomonas vasicola pv. vasculorum |
| 154 | 4476979 | 4477248 | - | NZ_CP018725.1 | Xanthomonas vesicatoria ATCC 35937 |
| 155 | 3504836 | 3505105 | + | NZ_CP058243.1 | Xanthomonas campestris pv. raphani |
| 156 | 2153236 | 2153502 | + | NZ_CP029425.1 | Bradyrhizobium ottawaense |
| 157 | 2329966 | 2330211 | - | NC_020520.1 | Ilumatobacter coccineus YM16-304 |
| 158 | 1469435 | 1469704 | - | NZ_CP072268.1 | Xanthomonas euvesicatoria pv. alfalfae |
| 159 | 89568 | 89846 | - | NZ_CP012676.1 | Pseudomonas versuta |
| 160 | 3169754 | 3170023 | + | NZ_CP007810.1 | Xanthomonas oryzae pv. oryzicola |
| 161 | 1448541 | 1448810 | - | NZ_CP048044.1 | Xanthomonas citri |
| 162 | 1236540 | 1236803 | - | NZ_AP018558.1 | Hydrogenophilus thermoluteolus |
| 163 | 828417 | 828695 | - | NZ_CP062158.2 | Pseudomonas lundensis |
| 164 | 2245421 | 2245684 | - | NZ_CP022464.2 | Enterocloster bolteae |
| 165 | 1673784 | 1674044 | + | NZ_LS483423.1 | Jonesia denitrificans |
| 166 | 3689061 | 3689327 | + | NZ_CP034909.1 | Ensifer alkalisoli |
| 167 | 3671082 | 3671348 | + | NZ_CP023067.1 | Ensifer sojae CCBAU 05684 |
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