* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_HG965802.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00496.24
|
1.0
|
4
|
4640.0
|
opposite-strand
|
Bacterial extracellular solute-binding proteins, family 5 Middle
|
2
|
PF03352.15
|
1.0
|
4
|
4238.5
|
opposite-strand
|
Methyladenine glycosylase
|
3
|
PF02601.17
|
1.0
|
4
|
2808.0
|
opposite-strand
|
Exonuclease VII, large subunit
|
4
|
PF13742.8
|
1.0
|
4
|
2808.0
|
opposite-strand
|
OB-fold nucleic acid binding domain
|
5
|
PF01336.27
|
1.0
|
4
|
2808.0
|
opposite-strand
|
OB-fold nucleic acid binding domain
|
6
|
PF20061.1
|
0.75
|
3
|
82
|
same-strand
|
Family of unknown function (DUF6460)
|
7
|
PF09608.12
|
1.0
|
4
|
372.0
|
opposite-strand
|
Putative transmembrane protein (Alph Pro TM)
|
8
|
PF01925.21
|
1.0
|
4
|
1184.0
|
opposite-strand
|
Sulfite exporter TauE/SafE
|
++ More..