Result : EXP02332
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP02332 |
| NCBI Accession ID | NC_005956.1 |
| Organism | Bartonella henselae str. Houston-1 |
| Left | 904632 |
| Right | 904865 |
| Strand | + |
| Nucleotide Sequence | CTGATCTCTTTAACTGGTTGCGCAACAAATGAACCTGTTTCTTGTATTGGTTGGTTACCCATTTATTTGGATAGGCAAGATGTTAGTGTGATTAGCCAGAATCTAGCAAGAGATATTTTGAAGCATAACAAACAGGGTGAACGCTTGTGTGGTTGGAGAAATGACAAGAAAGCGAAGGTATCAAGAGAAAGCTCTCACCAAAACAGAACAATAGCTGCTTCACGAGATGATTAA |
| Sequence | LISLTGCATNEPVSCIGWLPIYLDRQDVSVISQNLARDILKHNKQGERLCGWRNDKKAKVSRESSHQNRTIAASRDD |
| Source of smORF | Protein-level |
| Function | The localisation of the protein was found to be: Total Membrane exclusive. Pubmed:29141959 |
| Pubmed ID | 29141959 |
| Domain | |
| Functional Category | Manually curated function from literature |
| Uniprot ID | |
| ORF Length (Amino Acid) | 77 |
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| Conservation Analysis |
No. of Species: 6
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1159722 | 1159964 | - | NZ_HG965802.1 | Bartonella henselae |
| 2 | 898755 | 898997 | + | NZ_HG965802.1 | Bartonella henselae |
| 3 | 1006095 | 1006289 | - | NZ_HG965802.1 | Bartonella henselae |
| 4 | 262337 | 262540 | - | NZ_LR134527.1 | Bartonella elizabethae |
| 5 | 419996 | 420193 | + | NC_012846.1 | Bartonella grahamii as4aup |
| 6 | 1021260 | 1021457 | + | NC_012846.1 | Bartonella grahamii as4aup |
| 7 | 1022671 | 1022868 | + | NC_012846.1 | Bartonella grahamii as4aup |
| 8 | 1317888 | 1318085 | - | NC_012846.1 | Bartonella grahamii as4aup |
| 9 | 456067 | 456255 | + | NC_008783.1 | Bartonella bacilliformis KC583 |
| 10 | 1708773 | 1708964 | + | NZ_CP031844.2 | Bartonella krasnovii |
| 11 | 1883647 | 1883844 | + | NZ_LR134529.1 | Bartonella vinsonii |
| 12 | 1916001 | 1916198 | + | NZ_LR134529.1 | Bartonella vinsonii |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_HG965802.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00959.21 | 0.67 | 4 | 184.0 | same-strand | Phage lysozyme |
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