Protein Information |
Information Type | Description |
---|---|
Protein name | Protein SlyX homolog |
NCBI Accession ID | CP001050.1 |
Organism | Neisseria gonorrhoeae (strain NCCP11945) |
Left | 1844221 |
Right | 1844445 |
Strand | - |
Nucleotide Sequence | ATGGACGCGGTTCAAGAGTTGGAACGCCGTATTGTCGAACTGGAAATCCAAACCGCGCTTCAGGAGGACGTAATCTCCGGTCTGAACGCGATGGTGGCGGAATTGCGGCAGACGTTGGATTTGCAGCAGGCTCAGTTGAGGCTGCTGTATCAAAAAATGCAGGACAGGAATCCCGACGCGCAAGAGCCGTATTCCCTGCGCGACGAGATTCCGCCGCATTATTGA |
Sequence | MDAVQELERRIVELEIQTALQEDVISGLNAMVAELRQTLDLQQAQLRLLYQKMQDRNPDAQEPYSLRDEIPPHY |
Source of smORF | Swiss-Prot |
Function | The ORF matches to the profile of cl01090. Profile Description: SlyX. hypothetical protein; Provisional |
Pubmed ID | 18586945 |
Domain | CDD:412736 |
Functional Category | Others |
Uniprot ID | B4RQL3 |
ORF Length (Amino Acid) | 74 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 862800 | 863024 | - | NZ_CP012028.1 | Neisseria gonorrhoeae |
2 | 827895 | 828119 | - | NZ_CP031325.1 | Neisseria polysaccharea |
3 | 1763703 | 1763927 | - | NZ_CP031253.1 | Neisseria lactamica |
4 | 1963601 | 1963825 | + | NZ_CP021520.1 | Neisseria meningitidis |
5 | 1411082 | 1411306 | - | NZ_LS483369.1 | Neisseria cinerea |
6 | 1934891 | 1935118 | - | NZ_CP072524.1 | Neisseria sicca |
7 | 2144068 | 2144256 | - | NZ_CP059571.1 | Neisseria bacilliformis |
8 | 1562734 | 1562961 | + | NZ_CP039887.1 | Neisseria subflava |
9 | 1582866 | 1583093 | + | NZ_CP039886.1 | Neisseria flavescens |
10 | 1346921 | 1347139 | + | NZ_CP031252.1 | Neisseria elongata |
11 | 1959589 | 1959810 | - | NZ_LR134516.1 | Neisseria animaloris |
12 | 205332 | 205520 | - | NZ_CP031700.1 | Neisseria zalophi |
13 | 1043822 | 1044010 | - | NZ_LR134533.1 | Neisseria weaveri |
14 | 777085 | 777303 | - | NZ_CP046027.1 | Neisseria brasiliensis |
15 | 54600 | 54821 | + | NZ_LT906434.1 | Neisseria zoodegmatis |
16 | 1641271 | 1641489 | + | NZ_CP022278.1 | Neisseria chenwenguii |
17 | 449676 | 449897 | + | NZ_CP031699.1 | Neisseria animalis |
18 | 576803 | 577027 | + | NZ_LR134313.1 | Neisseria canis |
19 | 952397 | 952585 | - | NZ_CP019448.1 | Simonsiella muelleri ATCC 29453 |
20 | 762171 | 762395 | - | NZ_CP059565.1 | Neisseria wadsworthii |
21 | 2873216 | 2873434 | - | NZ_CP060414.1 | Neisseria musculi |
22 | 1900065 | 1900262 | - | NZ_CP059569.1 | Kingella oralis |
23 | 228945 | 229172 | + | NZ_CP007446.1 | Snodgrassella alvi wkB2 |
24 | 870491 | 870679 | - | NZ_CP059564.1 | Alysiella filiformis |
25 | 1327473 | 1327697 | - | NZ_LT906482.1 | Eikenella corrodens |
26 | 195088 | 195312 | - | NZ_CP038018.1 | Eikenella exigua |
27 | 190149 | 190331 | - | NZ_CP059563.1 | Conchiformibius steedae |
28 | 1119980 | 1120180 | - | NZ_AP012547.1 | Sulfuritalea hydrogenivorans sk43H |
29 | 1200524 | 1200736 | - | NZ_LR134365.1 | Cardiobacterium hominis |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF03553.16 | 0.9 | 26 | 1.0 | same-strand | Na+/H+ antiporter family |
2 | PF13726.8 | 0.9 | 26 | 1.0 | same-strand | Na+-H+ antiporter family |