Result : B4RQL3
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Protein SlyX homolog |
| NCBI Accession ID | CP001050.1 |
| Organism | Neisseria gonorrhoeae (strain NCCP11945) |
| Left | 1844221 |
| Right | 1844445 |
| Strand | - |
| Nucleotide Sequence | ATGGACGCGGTTCAAGAGTTGGAACGCCGTATTGTCGAACTGGAAATCCAAACCGCGCTTCAGGAGGACGTAATCTCCGGTCTGAACGCGATGGTGGCGGAATTGCGGCAGACGTTGGATTTGCAGCAGGCTCAGTTGAGGCTGCTGTATCAAAAAATGCAGGACAGGAATCCCGACGCGCAAGAGCCGTATTCCCTGCGCGACGAGATTCCGCCGCATTATTGA |
| Sequence | MDAVQELERRIVELEIQTALQEDVISGLNAMVAELRQTLDLQQAQLRLLYQKMQDRNPDAQEPYSLRDEIPPHY |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl01090. Profile Description: SlyX. hypothetical protein; Provisional |
| Pubmed ID | 18586945 |
| Domain | CDD:412736 |
| Functional Category | Others |
| Uniprot ID | B4RQL3 |
| ORF Length (Amino Acid) | 74 |
++ More..
| Conservation Analysis |
No. of Species: 29
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 862800 | 863024 | - | NZ_CP012028.1 | Neisseria gonorrhoeae |
| 2 | 827895 | 828119 | - | NZ_CP031325.1 | Neisseria polysaccharea |
| 3 | 1763703 | 1763927 | - | NZ_CP031253.1 | Neisseria lactamica |
| 4 | 1963601 | 1963825 | + | NZ_CP021520.1 | Neisseria meningitidis |
| 5 | 1411082 | 1411306 | - | NZ_LS483369.1 | Neisseria cinerea |
| 6 | 1934891 | 1935118 | - | NZ_CP072524.1 | Neisseria sicca |
| 7 | 2144068 | 2144256 | - | NZ_CP059571.1 | Neisseria bacilliformis |
| 8 | 1562734 | 1562961 | + | NZ_CP039887.1 | Neisseria subflava |
| 9 | 1582866 | 1583093 | + | NZ_CP039886.1 | Neisseria flavescens |
| 10 | 1346921 | 1347139 | + | NZ_CP031252.1 | Neisseria elongata |
| 11 | 1959589 | 1959810 | - | NZ_LR134516.1 | Neisseria animaloris |
| 12 | 205332 | 205520 | - | NZ_CP031700.1 | Neisseria zalophi |
| 13 | 1043822 | 1044010 | - | NZ_LR134533.1 | Neisseria weaveri |
| 14 | 777085 | 777303 | - | NZ_CP046027.1 | Neisseria brasiliensis |
| 15 | 54600 | 54821 | + | NZ_LT906434.1 | Neisseria zoodegmatis |
| 16 | 1641271 | 1641489 | + | NZ_CP022278.1 | Neisseria chenwenguii |
| 17 | 449676 | 449897 | + | NZ_CP031699.1 | Neisseria animalis |
| 18 | 576803 | 577027 | + | NZ_LR134313.1 | Neisseria canis |
| 19 | 952397 | 952585 | - | NZ_CP019448.1 | Simonsiella muelleri ATCC 29453 |
| 20 | 762171 | 762395 | - | NZ_CP059565.1 | Neisseria wadsworthii |
| 21 | 2873216 | 2873434 | - | NZ_CP060414.1 | Neisseria musculi |
| 22 | 1900065 | 1900262 | - | NZ_CP059569.1 | Kingella oralis |
| 23 | 228945 | 229172 | + | NZ_CP007446.1 | Snodgrassella alvi wkB2 |
| 24 | 870491 | 870679 | - | NZ_CP059564.1 | Alysiella filiformis |
| 25 | 1327473 | 1327697 | - | NZ_LT906482.1 | Eikenella corrodens |
| 26 | 195088 | 195312 | - | NZ_CP038018.1 | Eikenella exigua |
| 27 | 190149 | 190331 | - | NZ_CP059563.1 | Conchiformibius steedae |
| 28 | 1119980 | 1120180 | - | NZ_AP012547.1 | Sulfuritalea hydrogenivorans sk43H |
| 29 | 1200524 | 1200736 | - | NZ_LR134365.1 | Cardiobacterium hominis |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP012028.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF03553.16 | 0.9 | 26 | 1.0 | same-strand | Na+/H+ antiporter family |
| 2 | PF13726.8 | 0.9 | 26 | 1.0 | same-strand | Na+-H+ antiporter family |
++ More..