* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_007795.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF02517.18
|
1.0
|
2
|
4913.5
|
same-strand
|
Type II CAAX prenyl endopeptidase Rce1-like
|
2
|
PF07242.13
|
1.0
|
2
|
1626.0
|
same-strand
|
Protein of unknown function (DUF1430)
|
3
|
PF00005.29
|
1.0
|
2
|
665.0
|
same-strand
|
ABC transporter
|
4
|
PF00534.22
|
1.0
|
2
|
356.0
|
same-strand
|
Glycosyl transferases group 1
|
5
|
PF13692.8
|
1.0
|
2
|
356.0
|
same-strand
|
Glycosyl transferases group 1
|
6
|
PF13524.8
|
1.0
|
2
|
356.0
|
same-strand
|
Glycosyl transferases group 1
|
7
|
PF07681.14
|
1.0
|
2
|
1575.5
|
opposite-strand
|
DoxX
|
8
|
PF13564.8
|
1.0
|
2
|
1575.5
|
opposite-strand
|
DoxX-like family
|
9
|
PF01497.20
|
1.0
|
2
|
2408.0
|
same-strand
|
Periplasmic binding protein
|
++ More..