Result : EXP02279
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP02279 |
| NCBI Accession ID | NC_009641.1 |
| Organism | Staphylococcus aureus subsp. aureus str. Newman |
| Left | 1083150 |
| Right | 1083425 |
| Strand | + |
| Nucleotide Sequence | ATGGCGAAACAAGCAACAATGAAAAATGCAGCTTTGAAACAATTGACTAAAGATGCTGATGAAATCTTGCATCTGATTAAAGTTCAACTAGATAATTTAACATTACCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAA |
| Sequence | MAKQATMKNAALKQLTKDADEILHLIKVQLDNLTLPSCPLYEEVLDTQMFGLQKEVDFAVKLGLVDREDGKQIMLRLEKELSKLHEAFTLV |
| Source of smORF | Protein-level |
| Function | The ORF matches to the profile of cl26898. Profile Description: Protein of unknown function (DUF1507). hypothetical protein; Provisional |
| Pubmed ID | 34061833 |
| Domain | CDD:421409 |
| Functional Category | Conserved domain based functional assignment |
| Uniprot ID | B7GGM5 |
| ORF Length (Amino Acid) | 91 |
++ More..
| Conservation Analysis |
No. of Species: 175
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1026441 | 1026716 | + | NC_007795.1 | Staphylococcus aureus subsp. aureus NCTC 8325 |
| 2 | 1096625 | 1096900 | + | NZ_LR134304.1 | Staphylococcus schweitzeri |
| 3 | 1075139 | 1075414 | + | NZ_LT906460.1 | Staphylococcus simiae |
| 4 | 418720 | 418995 | + | NZ_CP007601.1 | Staphylococcus capitis subsp. capitis |
| 5 | 1900110 | 1900385 | - | NZ_AP018587.1 | Staphylococcus caprae |
| 6 | 782663 | 782941 | + | NZ_CP013911.1 | Staphylococcus haemolyticus |
| 7 | 1775102 | 1775377 | - | NZ_CP035288.1 | Staphylococcus epidermidis |
| 8 | 1601019 | 1601294 | + | NZ_CP066042.1 | Staphylococcus saccharolyticus |
| 9 | 1710771 | 1711046 | - | NZ_LR134242.1 | Staphylococcus warneri |
| 10 | 2269917 | 2270192 | + | NC_022737.1 | Staphylococcus pasteuri SP1 |
| 11 | 667227 | 667505 | - | NZ_CP014022.1 | Staphylococcus lugdunensis |
| 12 | 205798 | 206073 | - | NZ_CP033732.1 | Staphylococcus hominis |
| 13 | 710825 | 711100 | + | NZ_CP045927.1 | Staphylococcus agnetis |
| 14 | 1803263 | 1803538 | - | NZ_CP008747.1 | Staphylococcus hyicus |
| 15 | 863398 | 863673 | + | NC_014925.1 | Staphylococcus pseudintermedius HKU10-03 |
| 16 | 2070369 | 2070644 | + | NZ_CP020773.1 | Staphylococcus lutrae |
| 17 | 1905293 | 1905568 | - | NZ_CP018776.1 | Staphylococcus condimenti |
| 18 | 1162328 | 1162603 | + | NZ_CP033460.1 | Staphylococcus debuckii |
| 19 | 1736568 | 1736843 | - | NZ_LR134089.1 | Staphylococcus saprophyticus |
| 20 | 1828812 | 1829087 | - | NZ_CP008724.1 | Staphylococcus xylosus |
| 21 | 912495 | 912770 | + | NZ_CP013114.1 | Staphylococcus equorum |
| 22 | 1572686 | 1572961 | - | NZ_CP065712.1 | Staphylococcus auricularis |
| 23 | 84888 | 85163 | + | NZ_CP022096.2 | Staphylococcus pettenkoferi |
| 24 | 1045752 | 1046027 | - | NZ_CP018199.1 | Staphylococcus succinus |
| 25 | 729441 | 729716 | + | NZ_LT906464.1 | Staphylococcus muscae |
| 26 | 1742561 | 1742836 | - | NZ_CP064056.1 | Staphylococcus lloydii |
| 27 | 1583548 | 1583829 | + | NZ_CP027770.1 | Staphylococcus felis |
| 28 | 1679370 | 1679645 | - | NZ_LT906462.1 | Mammaliicoccus stepanovicii |
| 29 | 896259 | 896534 | + | NZ_CP047361.1 | Macrococcus canis |
| 30 | 565052 | 565327 | + | NZ_CP068061.1 | Mammaliicoccus vitulinus |
| 31 | 1591384 | 1591659 | - | NZ_CP022046.2 | Mammaliicoccus sciuri |
| 32 | 825810 | 826085 | - | NZ_CP065729.1 | Macrococcus caseolyticus |
| 33 | 1656841 | 1657122 | + | NC_006270.3 | Bacillus licheniformis DSM 13 = ATCC 14580 |
| 34 | 1679447 | 1679728 | + | NZ_CP023665.1 | Bacillus paralicheniformis |
| 35 | 1672823 | 1673104 | + | NZ_LT603683.1 | Bacillus glycinifermentans |
| 36 | 963015 | 963290 | + | NZ_CP054482.1 | Macrococcus bohemicus |
| 37 | 3877302 | 3877544 | - | NZ_CP010820.1 | Lysinibacillus fusiformis |
| 38 | 907451 | 907693 | + | NZ_CP006837.1 | Lysinibacillus varians |
| 39 | 3762253 | 3762495 | - | NZ_CP019980.1 | Lysinibacillus sphaericus |
| 40 | 2208430 | 2208672 | - | NZ_CP016540.2 | Planococcus versutus |
| 41 | 2452030 | 2452263 | - | NZ_CP011937.1 | Bacillus velezensis |
| 42 | 1508880 | 1509113 | + | NZ_CP053376.1 | Bacillus amyloliquefaciens |
| 43 | 3398687 | 3398929 | - | NZ_CP014616.1 | Sporosarcina psychrophila |
| 44 | 250483 | 250710 | - | NZ_CP017786.1 | Bacillus xiamenensis |
| 45 | 1448795 | 1449022 | + | NZ_CP011150.1 | Bacillus altitudinis |
| 46 | 84732 | 84959 | - | NZ_CP043404.1 | Bacillus safensis |
| 47 | 1346832 | 1347068 | + | NZ_CP024035.1 | Priestia aryabhattai |
| 48 | 2045963 | 2046244 | - | NZ_CP016539.2 | Planococcus plakortidis |
| 49 | 2069153 | 2069434 | - | NZ_CP016538.2 | Planococcus maritimus |
| 50 | 2091497 | 2091778 | - | NZ_CP059540.1 | Planococcus maritimus |
| 51 | 1864470 | 1864751 | - | NZ_CP013659.2 | Planococcus rifietoensis |
| 52 | 2925674 | 2925916 | + | NZ_CP015108.1 | Sporosarcina ureae |
| 53 | 3980863 | 3981150 | - | NZ_CP032365.1 | Bacillus wiedmannii |
| 54 | 1729219 | 1729488 | + | NZ_CP033052.1 | Bacillus vallismortis |
| 55 | 1459978 | 1460244 | + | NZ_CP048852.1 | Bacillus tequilensis |
| 56 | 1556312 | 1556581 | + | NZ_CP051464.1 | Bacillus mojavensis |
| 57 | 1518890 | 1519159 | + | NZ_CP034943.1 | Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 |
| 58 | 1525219 | 1525488 | + | NZ_CP013984.1 | Bacillus inaquosorum |
| 59 | 435003 | 435272 | - | NZ_CP029364.1 | Bacillus halotolerans |
| 60 | 1552466 | 1552693 | + | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 61 | 2919310 | 2919552 | + | NZ_CP013661.2 | Planococcus kocurii |
| 62 | 2485295 | 2485537 | - | NZ_CP016534.2 | Planococcus antarcticus DSM 14505 |
| 63 | 2344145 | 2344387 | - | NZ_CP019401.1 | Planococcus faecalis |
| 64 | 1898439 | 1898681 | - | NZ_CP038012.1 | Sporosarcina pasteurii |
| 65 | 2651586 | 2651828 | - | NZ_CP017560.1 | Sporosarcina ureilytica |
| 66 | 1684797 | 1685084 | + | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 67 | 1259148 | 1259429 | + | NZ_CP031223.1 | Psychrobacillus glaciei |
| 68 | 1242788 | 1243069 | + | NZ_CP012024.1 | Bacillus smithii |
| 69 | 1390851 | 1391138 | + | NZ_CP040336.1 | Bacillus luti |
| 70 | 3973982 | 3974269 | - | NC_011725.1 | Bacillus cereus B4264 |
| 71 | 2506022 | 2506303 | - | NZ_CP016020.1 | Bacillus weihaiensis |
| 72 | 546754 | 547038 | + | NZ_CP019573.1 | Abyssicoccus albus |
| 73 | 2194330 | 2194581 | - | NZ_CP016543.2 | Planococcus donghaensis |
| 74 | 2898171 | 2898458 | - | NZ_CP070511.1 | Parageobacillus toebii |
| 75 | 1931550 | 1931819 | + | NZ_CP042593.1 | Bacillus dafuensis |
| 76 | 2649569 | 2649838 | + | NZ_CP017703.1 | Aeribacillus pallidus |
| 77 | 1440244 | 1440513 | + | NZ_CP009416.1 | Jeotgalibacillus malaysiensis |
| 78 | 3839576 | 3839863 | - | NZ_CP064875.1 | Bacillus toyonensis |
| 79 | 926869 | 927111 | + | NZ_CP012152.1 | Anoxybacillus gonensis |
| 80 | 2298779 | 2299030 | - | NZ_CP016537.2 | Planococcus halocryophilus |
| 81 | 3814187 | 3814474 | - | NC_007530.2 | Bacillus anthracis str. 'Ames Ancestor' |
| 82 | 496612 | 496884 | + | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 83 | 2686875 | 2687159 | - | NZ_CP065425.1 | Heyndrickxia vini |
| 84 | 2267509 | 2267751 | - | NZ_CP014342.1 | Geobacillus subterraneus |
| 85 | 2735053 | 2735337 | - | NZ_CP024109.1 | Bacillus cytotoxicus |
| 86 | 1629551 | 1629787 | + | NC_022524.1 | Bacillus infantis NRRL B-14911 |
| 87 | 2687403 | 2687684 | - | NZ_CP018866.1 | Sutcliffiella cohnii |
| 88 | 1315036 | 1315323 | + | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 89 | 5086044 | 5086325 | - | NZ_CP041305.1 | Cytobacillus ciccensis |
| 90 | 2780553 | 2780822 | - | NZ_LS483476.1 | Lederbergia lentus |
| 91 | 1828088 | 1828324 | - | NZ_LR134483.1 | Listeria grayi |
| 92 | 271607 | 271876 | - | NZ_CP022983.1 | Cytobacillus kochii |
| 93 | 2880960 | 2881232 | - | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 94 | 2151669 | 2151950 | - | NZ_CP038015.1 | Paenisporosarcina antarctica |
| 95 | 195027 | 195299 | + | NZ_CP061470.1 | Geobacillus zalihae |
| 96 | 1099502 | 1099774 | + | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 97 | 544281 | 544553 | + | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 98 | 443749 | 444027 | - | NZ_CP023643.1 | Brochothrix thermosphacta |
| 99 | 20313 | 20576 | + | NZ_CP009709.1 | Weizmannia coagulans DSM 1 = ATCC 7050 |
| 100 | 2252281 | 2252529 | + | NZ_CP019699.1 | Novibacillus thermophilus |
| 101 | 2045162 | 2045395 | + | NZ_CP053989.1 | Niallia circulans |
| 102 | 1370846 | 1371115 | - | NZ_CP068053.1 | Peribacillus psychrosaccharolyticus |
| 103 | 1167900 | 1168139 | + | NZ_CP008876.1 | Terribacillus goriensis |
| 104 | 1071888 | 1072157 | - | NZ_CP017704.1 | Peribacillus simplex NBRC 15720 = DSM 1321 |
| 105 | 1059681 | 1059968 | + | NZ_CP011366.1 | Salinicoccus halodurans |
| 106 | 2083926 | 2084213 | - | NZ_CP012502.1 | Bacillus beveridgei |
| 107 | 2440703 | 2440981 | - | NZ_CP011102.1 | Listeria weihenstephanensis |
| 108 | 1097358 | 1097603 | + | NC_003210.1 | Listeria monocytogenes EGD-e |
| 109 | 1449977 | 1450252 | + | NZ_CP041666.1 | Radiobacillus deserti |
| 110 | 4108168 | 4108437 | + | NZ_CP030926.1 | Peribacillus butanolivorans |
| 111 | 1113942 | 1114223 | + | NZ_CP009577.1 | Listeria ivanovii subsp. ivanovii |
| 112 | 1830300 | 1830563 | + | NC_017668.1 | Halobacillus halophilus DSM 2266 |
| 113 | 261464 | 261736 | + | NZ_CP013862.1 | Lentibacillus amyloliquefaciens |
| 114 | 1002230 | 1002511 | + | NC_013891.1 | Listeria seeligeri serovar 1/2b str. SLCC3954 |
| 115 | 1062342 | 1062623 | + | NZ_LT906444.1 | Listeria welshimeri |
| 116 | 1585073 | 1585357 | + | NZ_CP029797.1 | Paraliobacillus zengyii |
| 117 | 2534170 | 2534433 | - | NZ_CP020772.1 | Halobacillus mangrovi |
| 118 | 1541410 | 1541679 | + | NZ_CP015378.1 | Fictibacillus phosphorivorans |
| 119 | 1532293 | 1532571 | - | NZ_CP011361.2 | Salimicrobium jeotgali |
| 120 | 1067014 | 1067247 | - | NZ_CP031092.1 | Salicibibacter kimchii |
| 121 | 1326267 | 1326503 | + | NZ_AP021853.1 | Sporolactobacillus terrae |
| 122 | 816296 | 816571 | + | NZ_CP039710.1 | Thermoactinomyces vulgaris |
| 123 | 3628232 | 3628513 | - | NZ_CP026363.1 | Brevibacillus agri |
| 124 | 4023855 | 4024127 | - | NZ_CP018622.1 | Virgibacillus dokdonensis |
| 125 | 3813411 | 3813647 | - | NZ_LR134338.1 | Brevibacillus brevis |
| 126 | 2748199 | 2748480 | - | NC_002570.2 | Alkalihalobacillus halodurans C-125 |
| 127 | 3386659 | 3386931 | - | NZ_CP022315.1 | Virgibacillus phasianinus |
| 128 | 3271667 | 3271951 | + | NZ_CP063356.1 | Anaerobacillus isosaccharinicus |
| 129 | 1653687 | 1653983 | - | NC_018704.1 | Amphibacillus xylanus NBRC 15112 |
| 130 | 2853657 | 2853938 | - | NC_014829.1 | Evansella cellulosilytica DSM 2522 |
| 131 | 3887203 | 3887463 | + | NZ_CP017705.1 | Brevibacillus laterosporus DSM 25 |
| 132 | 2465233 | 2465502 | - | NC_013791.2 | Alkalihalobacillus pseudofirmus OF4 |
| 133 | 2203216 | 2203488 | - | NZ_CP017962.1 | Virgibacillus halodenitrificans |
| 134 | 2867118 | 2867372 | - | NZ_CP048103.1 | Kroppenstedtia eburnea |
| 135 | 1056655 | 1056930 | - | NZ_CP035485.1 | Salicibibacter halophilus |
| 136 | 1952674 | 1952952 | - | NC_010556.1 | Exiguobacterium sibiricum 255-15 |
| 137 | 1686255 | 1686536 | + | NZ_CP024848.1 | Oceanobacillus zhaokaii |
| 138 | 2737112 | 2737384 | - | NZ_CP022437.1 | Virgibacillus necropolis |
| 139 | 2694671 | 2694928 | - | NZ_CP019659.1 | Paenibacillus larvae subsp. larvae |
| 140 | 6482786 | 6483049 | - | NC_017672.3 | Paenibacillus mucilaginosus K02 |
| 141 | 697481 | 697741 | + | NZ_CP035492.1 | Paenibacillus protaetiae |
| 142 | 2638451 | 2638702 | - | NZ_CP048104.1 | Kroppenstedtia pulmonis |
| 143 | 4367800 | 4368069 | - | NZ_CP034235.1 | Paenibacillus psychroresistens |
| 144 | 1468036 | 1468305 | + | NC_004193.1 | Oceanobacillus iheyensis HTE831 |
| 145 | 2288963 | 2289241 | - | NC_019897.1 | Thermobacillus composti KWC4 |
| 146 | 4431883 | 4432143 | + | NZ_CP011058.1 | Paenibacillus beijingensis |
| 147 | 904282 | 904527 | + | NZ_CP045293.1 | Paenibacillus guangzhouensis |
| 148 | 1155871 | 1156158 | - | NZ_CP016809.1 | Paenibacillus ihbetae |
| 149 | 2585092 | 2585349 | + | NZ_CP009286.1 | Paenibacillus stellifer |
| 150 | 2214908 | 2215198 | + | NZ_CP034346.1 | Paenibacillus lutimineralis |
| 151 | 1702404 | 1702670 | - | NZ_CP040676.1 | Exiguobacterium mexicanum |
| 152 | 2325132 | 2325353 | - | NZ_CP014167.1 | Paenibacillus yonginensis |
| 153 | 490979 | 491251 | - | NZ_CP041217.1 | Saccharibacillus brassicae |
| 154 | 3509528 | 3509767 | + | NZ_CP011388.1 | Paenibacillus swuensis |
| 155 | 4456066 | 4456326 | - | NZ_CP043611.1 | Paenibacillus antarcticus |
| 156 | 3568589 | 3568876 | + | NZ_CP009285.1 | Paenibacillus borealis |
| 157 | 2787041 | 2787337 | + | NZ_CP009428.1 | Paenibacillus odorifer |
| 158 | 2424737 | 2425015 | + | NZ_CP004078.1 | Paenibacillus sabinae T27 |
| 159 | 4304059 | 4304313 | - | NZ_CP048209.1 | Paenibacillus lycopersici |
| 160 | 1625294 | 1625587 | - | NZ_CP054614.1 | Paenibacillus barcinonensis |
| 161 | 2839106 | 2839372 | + | NZ_CP009288.1 | Paenibacillus durus |
| 162 | 2937651 | 2937923 | + | NZ_CP034248.1 | Paenibacillus lentus |
| 163 | 2124402 | 2124665 | + | NZ_CP020028.1 | Paenibacillus kribbensis |
| 164 | 1354909 | 1355199 | - | NZ_CP045295.1 | Paenibacillus cellulositrophicus |
| 165 | 5022280 | 5022570 | + | NZ_CP048429.1 | Paenibacillus jilunlii |
| 166 | 3455328 | 3455618 | + | NZ_LN831776.1 | Paenibacillus riograndensis SBR5 |
| 167 | 4408311 | 4408601 | - | NZ_AP019400.1 | Cohnella abietis |
| 168 | 121361 | 121624 | - | NZ_CP045298.1 | Paenibacillus brasilensis |
| 169 | 2214108 | 2214383 | + | NZ_CP021780.1 | Paenibacillus donghaensis |
| 170 | 4864026 | 4864307 | - | NZ_CP034437.1 | Paenibacillus albus |
| 171 | 5324811 | 5325074 | - | NC_016641.1 | Paenibacillus terrae HPL-003 |
| 172 | 3096506 | 3096796 | + | NZ_CP009287.1 | Paenibacillus graminis |
| 173 | 4137694 | 4137966 | - | NZ_CP013023.1 | Paenibacillus bovis |
| 174 | 6107251 | 6107541 | - | NZ_CP068595.1 | Paenibacillus sonchi |
| 175 | 1095165 | 1095458 | + | NZ_AP019308.1 | Paenibacillus baekrokdamisoli |
| 176 | 6416865 | 6417119 | + | NZ_CP048286.1 | Paenibacillus rhizovicinus |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LT906460.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01098.21 | 0.9 | 157 | 207.0 | same-strand | Cell cycle protein |
| 2 | PF02786.19 | 0.69 | 121 | 1481.5 | same-strand | Carbamoyl-phosphate synthase L chain, ATP binding domain |
| 3 | PF02436.20 | 0.7 | 122 | 1486 | same-strand | Conserved carboxylase domain |
| 4 | PF00289.24 | 0.7 | 122 | 1486 | same-strand | Biotin carboxylase, N-terminal domain |
| 5 | PF02785.21 | 0.7 | 122 | 1486 | same-strand | Biotin carboxylase C-terminal domain |
| 6 | PF00682.21 | 0.7 | 122 | 1486 | same-strand | HMGL-like |
| 7 | PF00364.24 | 0.7 | 122 | 1486 | same-strand | Biotin-requiring enzyme |
| 8 | PF02222.24 | 0.69 | 120 | 1486 | same-strand | ATP-grasp domain |
| 9 | PF02655.16 | 0.67 | 117 | 1481.5 | same-strand | ATP-grasp domain |
| 10 | PF01040.20 | 0.67 | 118 | 6364 | same-strand | UbiA prenyltransferase family |
| 11 | PF09963.11 | 0.61 | 106 | 1363 | opposite-strand | Uncharacterized protein conserved in bacteria (DUF2197) |
++ More..