* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_007795.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF01597.21
|
1.0
|
2
|
2280.0
|
same-strand
|
Glycine cleavage H-protein
|
2
|
PF00085.22
|
1.0
|
2
|
46.0
|
same-strand
|
Thioredoxin
|
3
|
PF00005.29
|
1.0
|
2
|
34.0
|
same-strand
|
ABC transporter
|
4
|
PF09383.12
|
1.0
|
2
|
34.0
|
same-strand
|
NIL domain
|
5
|
PF13401.8
|
1.0
|
2
|
34.0
|
same-strand
|
AAA domain
|
6
|
PF00528.24
|
1.0
|
2
|
1052.0
|
same-strand
|
Binding-protein-dependent transport system inner membrane component
|
7
|
PF03180.16
|
1.0
|
2
|
1765.0
|
same-strand
|
NlpA lipoprotein
|
8
|
PF05532.14
|
1.0
|
2
|
2897.0
|
same-strand
|
CsbD-like
|
9
|
PF04018.15
|
1.0
|
2
|
3329.0
|
opposite-strand
|
Domain of unknown function (DUF368)
|
++ More..