* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_003197.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00232.20
|
1.0
|
3
|
5602
|
opposite-strand
|
Glycosyl hydrolase family 1
|
2
|
PF02347.18
|
1.0
|
3
|
1834
|
same-strand
|
Glycine cleavage system P-protein
|
3
|
PF01597.21
|
1.0
|
3
|
1282
|
same-strand
|
Glycine cleavage H-protein
|
4
|
PF01571.23
|
1.0
|
3
|
162
|
same-strand
|
Aminomethyltransferase folate-binding domain
|
5
|
PF08669.13
|
1.0
|
3
|
162
|
same-strand
|
Glycine cleavage T-protein C-terminal barrel domain
|
6
|
PF01494.21
|
1.0
|
3
|
883.5
|
same-strand
|
FAD binding domain
|
7
|
PF00557.26
|
1.0
|
3
|
2723
|
same-strand
|
Metallopeptidase family M24
|
8
|
PF05195.18
|
1.0
|
3
|
2723
|
same-strand
|
Aminopeptidase P, N-terminal domain
|
9
|
PF03695.15
|
1.0
|
3
|
4066
|
same-strand
|
Uncharacterised protein family (UPF0149)
|
10
|
PF05164.15
|
1.0
|
3
|
4812
|
opposite-strand
|
Cell division protein ZapA
|
++ More..