* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_003197.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF02445.18
|
0.67
|
2
|
2236.0
|
opposite-strand
|
Quinolinate synthetase A protein
|
2
|
PF04973.14
|
0.67
|
2
|
1492.0
|
opposite-strand
|
Nicotinamide mononucleotide transporter
|
3
|
PF01545.23
|
0.67
|
2
|
557.0
|
same-strand
|
Cation efflux family
|
4
|
PF13985.8
|
0.67
|
2
|
60.0
|
same-strand
|
YbgS-like protein
|
5
|
PF00793.22
|
0.67
|
2
|
186.0
|
opposite-strand
|
DAHP synthetase I family
|
++ More..