* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_015848.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00903.27
|
1.0
|
2
|
1942.0
|
same-strand
|
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
|
2
|
PF12681.9
|
1.0
|
2
|
1942.0
|
same-strand
|
Glyoxalase-like domain
|
3
|
PF18029.3
|
1.0
|
2
|
1942.0
|
same-strand
|
Glyoxalase-like domain
|
4
|
PF00106.27
|
1.0
|
2
|
1020.5
|
same-strand
|
short chain dehydrogenase
|
5
|
PF13561.8
|
1.0
|
2
|
1020.5
|
same-strand
|
Enoyl-(Acyl carrier protein) reductase
|
6
|
PF00378.22
|
1.0
|
2
|
-3.0
|
same-strand
|
Enoyl-CoA hydratase/isomerase
|
7
|
PF01850.23
|
1.0
|
2
|
249.0
|
same-strand
|
PIN domain
|
8
|
PF00501.30
|
1.0
|
2
|
1117.0
|
same-strand
|
AMP-binding enzyme
|
9
|
PF13193.8
|
1.0
|
2
|
1117.0
|
same-strand
|
AMP-binding enzyme C-terminal domain
|
10
|
PF07969.13
|
1.0
|
2
|
2910.0
|
opposite-strand
|
Amidohydrolase family
|
11
|
PF01979.22
|
1.0
|
2
|
2910.0
|
opposite-strand
|
Amidohydrolase family
|
12
|
PF13378.8
|
1.0
|
2
|
4511.0
|
opposite-strand
|
Enolase C-terminal domain-like
|
13
|
PF18374.3
|
1.0
|
2
|
4511.0
|
opposite-strand
|
Enolase N-terminal domain-like
|
++ More..