* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_015848.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00107.28
|
1.0
|
4
|
3767.5
|
opposite-strand
|
Zinc-binding dehydrogenase
|
2
|
PF13602.8
|
1.0
|
4
|
3767.5
|
opposite-strand
|
Zinc-binding dehydrogenase
|
3
|
PF00266.21
|
1.0
|
4
|
2537.5
|
same-strand
|
Aminotransferase class-V
|
4
|
PF10759.11
|
1.0
|
4
|
-95.0
|
opposite-strand
|
Protein of unknown function (DUF2587)
|
5
|
PF00005.29
|
1.0
|
4
|
25.0
|
opposite-strand
|
ABC transporter
|
6
|
PF13641.8
|
1.0
|
4
|
851.5
|
opposite-strand
|
Glycosyltransferase like family 2
|
7
|
PF01061.26
|
1.0
|
4
|
1770.0
|
opposite-strand
|
ABC-2 type transporter
|
++ More..